CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 18  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1145
SER 770.0070
PRO 780.0049
VAL 790.0037
ALA 800.0057
GLY 810.0057
GLN 820.0038
LYS 830.0033
TYR 840.0022
ASP 850.0032
TYR 860.0021
ILE 870.0015
LEU 880.0021
VAL 890.0020
GLY 900.0024
GLY 910.0027
GLY 920.0014
THR 930.0017
ALA 940.0016
ALA 950.0024
CYS 960.0029
VAL 970.0031
LEU 980.0034
ALA 990.0034
ASN 1000.0043
ARG 1010.0039
LEU 1020.0037
SER 1030.0040
ALA 1040.0058
ASP 1050.0059
GLY 1060.0054
SER 1070.0052
LYS 1080.0042
ARG 1090.0026
VAL 1100.0024
LEU 1110.0019
VAL 1120.0026
LEU 1130.0028
GLU 1140.0032
ALA 1150.0036
GLY 1160.0038
PRO 1170.0044
ASP 1180.0048
ASN 1190.0047
THR 1200.0057
SER 1210.0052
ARG 1220.0043
ASP 1230.0040
VAL 1240.0027
LYS 1250.0028
ILE 1260.0022
PRO 1270.0019
ALA 1280.0036
ALA 1290.0038
ILE 1300.0040
THR 1310.0051
ARG 1320.0051
LEU 1330.0047
PHE 1340.0047
ARG 1350.0053
SER 1360.0045
PRO 1370.0046
LEU 1380.0034
ASP 1390.0035
TRP 1400.0026
ASN 1410.0038
LEU 1420.0043
PHE 1430.0059
SER 1440.0066
GLU 1450.0075
LEU 1460.0121
GLN 1470.0110
GLU 1480.0136
GLN 1490.0098
LEU 1500.0084
ALA 1510.0093
GLU 1520.0131
ARG 1530.0109
GLN 1540.0091
ILE 1550.0072
TYR 1560.0064
MET 1570.0056
ALA 1580.0038
ARG 1590.0029
GLY 1600.0022
ARG 1610.0027
LEU 1620.0029
LEU 1630.0032
GLY 1640.0026
GLY 1650.0014
SER 1660.0010
SER 1670.0011
ALA 1680.0014
THR 1690.0018
ASN 1700.0026
ALA 1710.0029
THR 1720.0020
LEU 1730.0025
TYR 1740.0027
HISD 1750.0041
ARG 1760.0038
GLY 1770.0050
ALA 1780.0061
ALA 1790.0057
GLY 1800.0065
ASP 1810.0060
TYR 1820.0050
ASP 1830.0056
ALA 1840.0062
TRP 1850.0055
GLY 1860.0044
VAL 1870.0035
GLU 1880.0076
GLY 1890.0041
TRP 1900.0046
SER 1910.0047
SER 1920.0052
GLU 1930.0052
ASP 1940.0040
VAL 1950.0040
LEU 1960.0048
SER 1970.0049
TRP 1980.0038
PHE 1990.0039
VAL 2000.0051
GLN 2010.0046
ALA 2020.0039
GLU 2030.0041
THR 2040.0050
ASN 2050.0057
ALA 2060.0067
ASP 2070.0071
PHE 2080.0081
GLY 2090.0088
PRO 2100.0090
GLY 2110.0098
ALA 2120.0093
TYR 2130.0073
HISH 2140.0064
GLY 2150.0060
SER 2160.0066
GLY 2170.0061
GLY 2180.0052
PRO 2190.0045
MET 2200.0035
ARG 2210.0031
VAL 2220.0025
GLU 2230.0021
ASN 2240.0027
PRO 2250.0026
ARG 2260.0018
TYR 2270.0054
THR 2280.0063
ASN 2290.0069
LYS 2300.0111
GLN 2310.0097
LEU 2320.0079
HISE 2330.0072
THR 2340.0079
ALA 2350.0064
PHE 2360.0056
PHE 2370.0067
LYS 2380.0062
ALA 2390.0046
ALA 2400.0056
GLU 2410.0072
GLU 2420.0058
VAL 2430.0057
GLY 2440.0074
LEU 2450.0059
THR 2460.0068
PRO 2470.0074
ASN 2480.0056
SER 2490.0053
ASP 2500.0050
PHE 2510.0050
ASN 2520.0050
ASP 2530.0062
TRP 2540.0062
SER 2550.0073
HISE 2560.0067
ASP 2570.0056
HISE 2580.0055
ALA 2590.0060
GLY 2600.0059
TYR 2610.0061
GLY 2620.0068
THR 2630.0050
PHE 2640.0042
GLN 2650.0026
VAL 2660.0016
MET 2670.0009
GLN 2680.0008
ASP 2690.0025
LYS 2700.0028
GLY 2710.0016
THR 2720.0022
ARG 2730.0014
ALA 2740.0018
ASP 2750.0026
MET 2760.0029
TYR 2770.0034
ARG 2780.0040
GLN 2790.0041
TYR 2800.0040
LEU 2810.0048
LYS 2820.0058
PRO 2830.0070
VAL 2840.0064
LEU 2850.0058
GLY 2860.0060
ARG 2870.0053
ARG 2880.0045
ASN 2890.0031
LEU 2900.0031
GLN 2910.0026
VAL 2920.0035
LEU 2930.0037
THR 2940.0046
GLY 2950.0052
ALA 2960.0054
ALA 2970.0048
VAL 2980.0031
THR 2990.0028
LYS 3000.0020
VAL 3010.0014
ASN 3020.0017
ILE 3030.0010
ASP 3040.0008
GLN 3050.0033
ALA 3060.0050
ALA 3070.0081
GLY 3080.0079
LYS 3090.0054
ALA 3100.0035
GLN 3110.0021
ALA 3120.0010
LEU 3130.0019
GLY 3140.0019
VAL 3150.0017
GLU 3160.0028
PHE 3170.0042
SER 3180.0067
THR 3190.0080
ASP 3200.0141
GLY 3210.0144
PRO 3220.0132
THR 3230.0177
GLY 3240.0167
GLU 3250.0144
ARG 3260.0071
LEU 3270.0060
SER 3280.0046
ALA 3290.0032
GLU 3300.0032
LEU 3310.0028
ALA 3320.0044
PRO 3330.0068
GLY 3340.0064
GLY 3350.0026
GLU 3360.0021
VAL 3370.0016
ILE 3380.0023
MET 3390.0024
CYS 3400.0025
ALA 3410.0014
GLY 3420.0010
ALA 3430.0011
VAL 3440.0012
HISD 3450.0009
THR 3460.0009
PRO 3470.0020
PHE 3480.0023
LEU 3490.0021
LEU 3500.0027
LYS 3510.0034
HISE 3520.0035
SER 3530.0033
GLY 3540.0040
VAL 3550.0040
GLY 3560.0050
PRO 3570.0067
SER 3580.0078
ALA 3590.0094
GLU 3600.0081
LEU 3610.0073
LYS 3620.0089
GLU 3630.0097
PHE 3640.0083
GLY 3650.0086
ILE 3660.0068
PRO 3670.0065
VAL 3680.0059
VAL 3690.0047
SER 3700.0054
ASN 3710.0061
LEU 3720.0051
ALA 3730.0053
GLY 3740.0025
VAL 3750.0023
GLY 3760.0022
GLN 3770.0018
ASN 3780.0022
LEU 3790.0031
GLN 3800.0053
ASP 3810.0056
GLN 3820.0058
PRO 3830.0068
ALA 3840.0058
CYS 3850.0040
LEU 3860.0035
THR 3870.0023
ALA 3880.0044
ALA 3890.0048
PRO 3900.0067
VAL 3910.0073
LYS 3920.0091
GLU 3930.0137
LYS 3940.0138
TYR 3950.0111
ASP 3960.0113
GLY 3970.0111
ILE 3980.0080
ALA 3990.0069
ILE 4000.0065
SER 4010.0066
ASP 4020.0065
HISE 4030.0062
ILE 4040.0054
TYR 4050.0074
ASN 4060.0086
GLU 4070.0095
LYS 4080.0114
GLY 4090.0095
GLN 4100.0091
ILE 4110.0069
ARG 4120.0069
LYS 4130.0084
ARG 4140.0100
ALA 4150.0056
ILE 4160.0046
ALA 4170.0070
SER 4180.0054
TYR 4190.0034
LEU 4200.0053
LEU 4210.0059
GLY 4220.0026
GLY 4230.0014
ARG 4240.0020
GLY 4250.0038
GLY 4260.0047
LEU 4270.0033
THR 4280.0025
SER 4290.0038
THR 4300.0049
GLY 4310.0050
CYS 4320.0054
ASP 4330.0051
ARG 4340.0058
GLY 4350.0056
ALA 4360.0057
PHE 4370.0054
VAL 4380.0052
ARG 4390.0060
THR 4400.0084
ALA 4410.0092
GLY 4420.0101
GLN 4430.0080
ALA 4440.0074
LEU 4450.0065
PRO 4460.0066
ASP 4470.0070
LEU 4480.0061
GLN 4490.0058
VAL 4500.0051
ARG 4510.0053
PHE 4520.0059
VAL 4530.0063
PRO 4540.0064
GLY 4550.0077
MET 4560.0072
ALA 4570.0071
LEU 4580.0058
ASP 4590.0061
PRO 4600.0062
ASP 4610.0061
GLY 4620.0063
VAL 4630.0068
SER 4640.0072
THR 4650.0066
TYR 4660.0068
VAL 4670.0075
ARG 4680.0074
PHE 4690.0071
ALA 4700.0082
LYS 4710.0093
PHE 4720.0087
GLN 4730.0090
SER 4740.0109
GLN 4750.0122
GLY 4760.0113
LEU 4770.0103
LYS 4780.0085
TRP 4790.0065
PRO 4800.0066
SER 4810.0066
GLY 4820.0064
ILE 4830.0058
THR 4840.0053
MET 4850.0040
GLN 4860.0049
LEU 4870.0046
ILE 4880.0058
ALA 4890.0063
CYS 4900.0072
ARG 4910.0072
PRO 4920.0075
GLN 4930.0087
SER 4940.0078
THR 4950.0072
GLY 4960.0069
SER 4970.0031
VAL 4980.0020
GLY 4990.0014
LEU 5000.0034
LYS 5010.0041
SER 5020.0054
ALA 5030.0052
ASP 5040.0046
PRO 5050.0035
PHE 5060.0039
ALA 5070.0038
PRO 5080.0048
PRO 5090.0013
LYS 5100.0018
LEU 5110.0035
SER 5120.0068
PRO 5130.0064
GLY 5140.0074
TYR 5150.0081
LEU 5160.0075
THR 5170.0097
ASP 5180.0095
LYS 5190.0064
ASP 5200.0077
GLY 5210.0085
ALA 5220.0088
ASP 5230.0069
LEU 5240.0053
ALA 5250.0077
THR 5260.0076
LEU 5270.0050
ARG 5280.0066
LYS 5290.0087
GLY 5300.0070
ILE 5310.0046
HISE 5320.0095
TRP 5330.0060
ALA 5340.0031
ARG 5350.0051
ASP 5360.0044
VAL 5370.0028
ALA 5380.0006
ARG 5390.0017
SER 5400.0019
SER 5410.0019
ALA 5420.0044
LEU 5430.0040
SER 5440.0032
GLU 5450.0058
TYR 5460.0070
LEU 5470.0058
ASP 5480.0062
GLY 5490.0064
GLU 5500.0059
LEU 5510.0088
PHE 5520.0062
PRO 5530.0063
GLY 5540.0135
SER 5550.0389
GLY 5560.0551
VAL 5570.0389
VAL 5580.0581
SER 5590.0534
ASP 5600.0385
ASP 5610.0266
GLN 5620.0283
ILE 5630.0135
ASP 5640.0068
GLU 5650.0112
TYR 5660.0073
ILE 5670.0025
ARG 5680.0059
ARG 5690.0070
SER 5700.0058
ILE 5710.0069
HISD 5720.0060
SER 5730.0065
SER 5740.0061
ASN 5750.0046
ALA 5760.0043
ILE 5770.0040
THR 5780.0030
GLY 5790.0020
THR 5800.0019
CYS 5810.0022
LYS 5820.0024
MET 5830.0027
GLY 5840.0050
ASN 5850.0058
ALA 5860.0059
GLY 5870.0048
ASP 5880.0049
SER 5890.0047
SER 5900.0038
SER 5910.0037
VAL 5920.0035
VAL 5930.0050
ASP 5940.0054
ASN 5950.0060
GLN 5960.0047
LEU 5970.0051
ARG 5980.0060
VAL 5990.0038
HISE 6000.0045
GLY 6010.0047
VAL 6020.0036
GLU 6030.0030
GLY 6040.0019
LEU 6050.0027
ARG 6060.0029
VAL 6070.0031
VAL 6080.0024
ASP 6090.0021
ALA 6100.0019
SER 6110.0026
VAL 6120.0023
VAL 6130.0020
PRO 6140.0033
LYS 6150.0041
ILE 6160.0044
PRO 6170.0047
GLY 6180.0056
GLY 6190.0056
GLN 6200.0044
THR 6210.0033
GLY 6220.0022
ALA 6230.0023
PRO 6240.0023
VAL 6250.0022
VAL 6260.0027
MET 6270.0029
ILE 6280.0027
ALA 6290.0030
GLU 6300.0028
ARG 6310.0029
ALA 6320.0033
ALA 6330.0028
ALA 6340.0026
LEU 6350.0035
LEU 6360.0031
THR 6370.0030
GLY 6380.0030
LYS 6390.0029
ALA 6400.0036
THR 6410.0065
ILE 6420.0115
GLY 6430.0220
ALA 6440.1145
SER 6450.0707
ALA 6460.0406
ALA 6470.0653
ALA 6480.0935
PRO 6490.0750

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.