CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 21  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0556
SER 770.0057
PRO 780.0048
VAL 790.0055
ALA 800.0071
GLY 810.0084
GLN 820.0075
LYS 830.0075
TYR 840.0064
ASP 850.0066
TYR 860.0055
ILE 870.0052
LEU 880.0051
VAL 890.0048
GLY 900.0046
GLY 910.0046
GLY 920.0042
THR 930.0031
ALA 940.0036
ALA 950.0044
CYS 960.0041
VAL 970.0035
LEU 980.0042
ALA 990.0045
ASN 1000.0044
ARG 1010.0041
LEU 1020.0043
SER 1030.0045
ALA 1040.0047
ASP 1050.0049
GLY 1060.0052
SER 1070.0058
LYS 1080.0057
ARG 1090.0059
VAL 1100.0051
LEU 1110.0050
VAL 1120.0046
LEU 1130.0043
GLU 1140.0040
ALA 1150.0040
GLY 1160.0039
PRO 1170.0041
ASP 1180.0039
ASN 1190.0044
THR 1200.0045
SER 1210.0055
ARG 1220.0055
ASP 1230.0057
VAL 1240.0049
LYS 1250.0061
ILE 1260.0070
PRO 1270.0078
ALA 1280.0075
ALA 1290.0077
ILE 1300.0078
THR 1310.0083
ARG 1320.0082
LEU 1330.0079
PHE 1340.0067
ARG 1350.0063
SER 1360.0061
PRO 1370.0047
LEU 1380.0041
ASP 1390.0043
TRP 1400.0038
ASN 1410.0033
LEU 1420.0026
PHE 1430.0010
SER 1440.0035
GLU 1450.0056
LEU 1460.0105
GLN 1470.0102
GLU 1480.0159
GLN 1490.0118
LEU 1500.0087
ALA 1510.0119
GLU 1520.0153
ARG 1530.0103
GLN 1540.0055
ILE 1550.0014
TYR 1560.0021
MET 1570.0034
ALA 1580.0042
ARG 1590.0042
GLY 1600.0047
ARG 1610.0040
LEU 1620.0036
LEU 1630.0028
GLY 1640.0031
GLY 1650.0039
SER 1660.0042
SER 1670.0039
ALA 1680.0035
THR 1690.0044
ASN 1700.0053
ALA 1710.0052
THR 1720.0053
LEU 1730.0058
TYR 1740.0057
HISD 1750.0055
ARG 1760.0089
GLY 1770.0087
ALA 1780.0101
ALA 1790.0116
GLY 1800.0116
ASP 1810.0088
TYR 1820.0076
ASP 1830.0095
ALA 1840.0094
TRP 1850.0060
GLY 1860.0063
VAL 1870.0034
GLU 1880.0021
GLY 1890.0021
TRP 1900.0029
SER 1910.0092
SER 1920.0106
GLU 1930.0123
ASP 1940.0094
VAL 1950.0084
LEU 1960.0117
SER 1970.0120
TRP 1980.0093
PHE 1990.0100
VAL 2000.0130
GLN 2010.0119
ALA 2020.0100
GLU 2030.0120
THR 2040.0152
ASN 2050.0176
ALA 2060.0225
ASP 2070.0228
PHE 2080.0257
GLY 2090.0284
PRO 2100.0283
GLY 2110.0302
ALA 2120.0272
TYR 2130.0221
HISH 2140.0210
GLY 2150.0176
SER 2160.0190
GLY 2170.0184
GLY 2180.0115
PRO 2190.0103
MET 2200.0083
ARG 2210.0091
VAL 2220.0075
GLU 2230.0068
ASN 2240.0063
PRO 2250.0090
ARG 2260.0113
TYR 2270.0134
THR 2280.0133
ASN 2290.0119
LYS 2300.0152
GLN 2310.0144
LEU 2320.0104
HISE 2330.0108
THR 2340.0122
ALA 2350.0110
PHE 2360.0089
PHE 2370.0095
LYS 2380.0118
ALA 2390.0104
ALA 2400.0084
GLU 2410.0111
GLU 2420.0128
VAL 2430.0111
GLY 2440.0106
LEU 2450.0090
THR 2460.0073
PRO 2470.0055
ASN 2480.0054
SER 2490.0062
ASP 2500.0085
PHE 2510.0082
ASN 2520.0115
ASP 2530.0151
TRP 2540.0152
SER 2550.0196
HISE 2560.0167
ASP 2570.0098
HISE 2580.0073
ALA 2590.0069
GLY 2600.0053
TYR 2610.0052
GLY 2620.0059
THR 2630.0059
PHE 2640.0055
GLN 2650.0065
VAL 2660.0060
MET 2670.0062
GLN 2680.0066
ASP 2690.0076
LYS 2700.0080
GLY 2710.0095
THR 2720.0054
ARG 2730.0047
ALA 2740.0048
ASP 2750.0031
MET 2760.0032
TYR 2770.0034
ARG 2780.0058
GLN 2790.0057
TYR 2800.0060
LEU 2810.0042
LYS 2820.0051
PRO 2830.0059
VAL 2840.0049
LEU 2850.0053
GLY 2860.0064
ARG 2870.0059
ARG 2880.0068
ASN 2890.0064
LEU 2900.0050
GLN 2910.0052
VAL 2920.0045
LEU 2930.0040
THR 2940.0038
GLY 2950.0041
ALA 2960.0038
ALA 2970.0037
VAL 2980.0035
THR 2990.0019
LYS 3000.0015
VAL 3010.0020
ASN 3020.0034
ILE 3030.0060
ASP 3040.0109
GLN 3050.0148
ALA 3060.0169
ALA 3070.0181
GLY 3080.0104
LYS 3090.0084
ALA 3100.0088
GLN 3110.0095
ALA 3120.0056
LEU 3130.0062
GLY 3140.0039
VAL 3150.0036
GLU 3160.0027
PHE 3170.0031
SER 3180.0028
THR 3190.0030
ASP 3200.0052
GLY 3210.0064
PRO 3220.0071
THR 3230.0098
GLY 3240.0074
GLU 3250.0056
ARG 3260.0026
LEU 3270.0027
SER 3280.0037
ALA 3290.0051
GLU 3300.0059
LEU 3310.0059
ALA 3320.0084
PRO 3330.0103
GLY 3340.0097
GLY 3350.0068
GLU 3360.0064
VAL 3370.0055
ILE 3380.0053
MET 3390.0052
CYS 3400.0056
ALA 3410.0053
GLY 3420.0061
ALA 3430.0064
VAL 3440.0062
HISD 3450.0054
THR 3460.0056
PRO 3470.0061
PHE 3480.0051
LEU 3490.0037
LEU 3500.0036
LYS 3510.0053
HISE 3520.0030
SER 3530.0033
GLY 3540.0061
VAL 3550.0049
GLY 3560.0101
PRO 3570.0184
SER 3580.0204
ALA 3590.0350
GLU 3600.0296
LEU 3610.0222
LYS 3620.0337
GLU 3630.0383
PHE 3640.0277
GLY 3650.0323
ILE 3660.0221
PRO 3670.0218
VAL 3680.0138
VAL 3690.0079
SER 3700.0053
ASN 3710.0082
LEU 3720.0094
ALA 3730.0138
GLY 3740.0099
VAL 3750.0086
GLY 3760.0081
GLN 3770.0061
ASN 3780.0071
LEU 3790.0070
GLN 3800.0047
ASP 3810.0038
GLN 3820.0022
PRO 3830.0014
ALA 3840.0015
CYS 3850.0020
LEU 3860.0038
THR 3870.0037
ALA 3880.0045
ALA 3890.0036
PRO 3900.0033
VAL 3910.0028
LYS 3920.0092
GLU 3930.0170
LYS 3940.0171
TYR 3950.0107
ASP 3960.0112
GLY 3970.0091
ILE 3980.0064
ALA 3990.0051
ILE 4000.0070
SER 4010.0039
ASP 4020.0024
HISE 4030.0050
ILE 4040.0034
TYR 4050.0085
ASN 4060.0161
GLU 4070.0253
LYS 4080.0308
GLY 4090.0219
GLN 4100.0213
ILE 4110.0144
ARG 4120.0105
LYS 4130.0221
ARG 4140.0192
ALA 4150.0085
ILE 4160.0072
ALA 4170.0033
SER 4180.0117
TYR 4190.0103
LEU 4200.0148
LEU 4210.0164
GLY 4220.0180
GLY 4230.0167
ARG 4240.0139
GLY 4250.0112
GLY 4260.0091
LEU 4270.0114
THR 4280.0107
SER 4290.0098
THR 4300.0088
GLY 4310.0086
CYS 4320.0079
ASP 4330.0081
ARG 4340.0073
GLY 4350.0054
ALA 4360.0046
PHE 4370.0044
VAL 4380.0061
ARG 4390.0081
THR 4400.0079
ALA 4410.0097
GLY 4420.0116
GLN 4430.0201
ALA 4440.0131
LEU 4450.0068
PRO 4460.0044
ASP 4470.0045
LEU 4480.0025
GLN 4490.0028
VAL 4500.0039
ARG 4510.0048
PHE 4520.0061
VAL 4530.0066
PRO 4540.0072
GLY 4550.0052
MET 4560.0042
ALA 4570.0054
LEU 4580.0052
ASP 4590.0048
PRO 4600.0045
ASP 4610.0044
GLY 4620.0057
VAL 4630.0058
SER 4640.0074
THR 4650.0065
TYR 4660.0082
VAL 4670.0102
ARG 4680.0083
PHE 4690.0082
ALA 4700.0144
LYS 4710.0160
PHE 4720.0142
GLN 4730.0187
SER 4740.0281
GLN 4750.0310
GLY 4760.0266
LEU 4770.0227
LYS 4780.0182
TRP 4790.0066
PRO 4800.0050
SER 4810.0025
GLY 4820.0033
ILE 4830.0044
THR 4840.0046
MET 4850.0045
GLN 4860.0040
LEU 4870.0031
ILE 4880.0011
ALA 4890.0010
CYS 4900.0015
ARG 4910.0020
PRO 4920.0023
GLN 4930.0033
SER 4940.0066
THR 4950.0069
GLY 4960.0067
SER 4970.0078
VAL 4980.0075
GLY 4990.0075
LEU 5000.0084
LYS 5010.0089
SER 5020.0067
ALA 5030.0087
ASP 5040.0048
PRO 5050.0031
PHE 5060.0018
ALA 5070.0023
PRO 5080.0045
PRO 5090.0050
LYS 5100.0061
LEU 5110.0069
SER 5120.0068
PRO 5130.0066
GLY 5140.0077
TYR 5150.0055
LEU 5160.0069
THR 5170.0093
ASP 5180.0124
LYS 5190.0126
ASP 5200.0134
GLY 5210.0101
ALA 5220.0083
ASP 5230.0053
LEU 5240.0048
ALA 5250.0040
THR 5260.0038
LEU 5270.0018
ARG 5280.0012
LYS 5290.0035
GLY 5300.0033
ILE 5310.0023
HISE 5320.0032
TRP 5330.0053
ALA 5340.0049
ARG 5350.0053
ASP 5360.0073
VAL 5370.0069
ALA 5380.0067
ARG 5390.0077
SER 5400.0094
SER 5410.0113
ALA 5420.0113
LEU 5430.0088
SER 5440.0083
GLU 5450.0094
TYR 5460.0080
LEU 5470.0063
ASP 5480.0041
GLY 5490.0042
GLU 5500.0041
LEU 5510.0044
PHE 5520.0040
PRO 5530.0035
GLY 5540.0063
SER 5550.0109
GLY 5560.0135
VAL 5570.0119
VAL 5580.0148
SER 5590.0157
ASP 5600.0133
ASP 5610.0139
GLN 5620.0120
ILE 5630.0062
ASP 5640.0072
GLU 5650.0087
TYR 5660.0061
ILE 5670.0039
ARG 5680.0058
ARG 5690.0050
SER 5700.0031
ILE 5710.0019
HISD 5720.0023
SER 5730.0021
SER 5740.0024
ASN 5750.0032
ALA 5760.0042
ILE 5770.0049
THR 5780.0057
GLY 5790.0059
THR 5800.0062
CYS 5810.0057
LYS 5820.0053
MET 5830.0054
GLY 5840.0070
ASN 5850.0087
ALA 5860.0136
GLY 5870.0142
ASP 5880.0118
SER 5890.0087
SER 5900.0089
SER 5910.0086
VAL 5920.0071
VAL 5930.0069
ASP 5940.0065
ASN 5950.0053
GLN 5960.0056
LEU 5970.0056
ARG 5980.0067
VAL 5990.0067
HISE 6000.0062
GLY 6010.0047
VAL 6020.0053
GLU 6030.0076
GLY 6040.0071
LEU 6050.0051
ARG 6060.0057
VAL 6070.0059
VAL 6080.0045
ASP 6090.0049
ALA 6100.0049
SER 6110.0052
VAL 6120.0044
VAL 6130.0034
PRO 6140.0025
LYS 6150.0020
ILE 6160.0008
PRO 6170.0028
GLY 6180.0026
GLY 6190.0018
GLN 6200.0016
THR 6210.0016
GLY 6220.0016
ALA 6230.0035
PRO 6240.0031
VAL 6250.0027
VAL 6260.0031
MET 6270.0029
ILE 6280.0029
ALA 6290.0033
GLU 6300.0033
ARG 6310.0028
ALA 6320.0037
ALA 6330.0036
ALA 6340.0035
LEU 6350.0048
LEU 6360.0052
THR 6370.0050
GLY 6380.0054
LYS 6390.0055
ALA 6400.0059
THR 6410.0091
ILE 6420.0098
GLY 6430.0166
ALA 6440.0342
SER 6450.0341
ALA 6460.0303
ALA 6470.0407
ALA 6480.0414
PRO 6490.0556

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.