CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 23  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0530
SER 770.0070
PRO 780.0061
VAL 790.0065
ALA 800.0077
GLY 810.0100
GLN 820.0099
LYS 830.0100
TYR 840.0085
ASP 850.0096
TYR 860.0061
ILE 870.0049
LEU 880.0042
VAL 890.0036
GLY 900.0027
GLY 910.0015
GLY 920.0018
THR 930.0023
ALA 940.0027
ALA 950.0026
CYS 960.0017
VAL 970.0032
LEU 980.0036
ALA 990.0028
ASN 1000.0028
ARG 1010.0043
LEU 1020.0060
SER 1030.0060
ALA 1040.0086
ASP 1050.0125
GLY 1060.0150
SER 1070.0154
LYS 1080.0123
ARG 1090.0101
VAL 1100.0066
LEU 1110.0047
VAL 1120.0029
LEU 1130.0033
GLU 1140.0025
ALA 1150.0028
GLY 1160.0031
PRO 1170.0034
ASP 1180.0035
ASN 1190.0043
THR 1200.0056
SER 1210.0064
ARG 1220.0064
ASP 1230.0067
VAL 1240.0058
LYS 1250.0064
ILE 1260.0075
PRO 1270.0078
ALA 1280.0072
ALA 1290.0067
ILE 1300.0064
THR 1310.0050
ARG 1320.0046
LEU 1330.0047
PHE 1340.0028
ARG 1350.0020
SER 1360.0020
PRO 1370.0032
LEU 1380.0035
ASP 1390.0035
TRP 1400.0024
ASN 1410.0019
LEU 1420.0024
PHE 1430.0034
SER 1440.0044
GLU 1450.0047
LEU 1460.0096
GLN 1470.0102
GLU 1480.0145
GLN 1490.0122
LEU 1500.0100
ALA 1510.0115
GLU 1520.0139
ARG 1530.0099
GLN 1540.0062
ILE 1550.0035
TYR 1560.0027
MET 1570.0031
ALA 1580.0029
ARG 1590.0032
GLY 1600.0031
ARG 1610.0031
LEU 1620.0028
LEU 1630.0023
GLY 1640.0029
GLY 1650.0032
SER 1660.0038
SER 1670.0045
ALA 1680.0044
THR 1690.0050
ASN 1700.0048
ALA 1710.0049
THR 1720.0051
LEU 1730.0061
TYR 1740.0071
HISD 1750.0073
ARG 1760.0089
GLY 1770.0062
ALA 1780.0064
ALA 1790.0051
GLY 1800.0034
ASP 1810.0021
TYR 1820.0033
ASP 1830.0027
ALA 1840.0021
TRP 1850.0020
GLY 1860.0025
VAL 1870.0030
GLU 1880.0039
GLY 1890.0044
TRP 1900.0034
SER 1910.0055
SER 1920.0064
GLU 1930.0088
ASP 1940.0095
VAL 1950.0093
LEU 1960.0115
SER 1970.0136
TRP 1980.0127
PHE 1990.0123
VAL 2000.0183
GLN 2010.0184
ALA 2020.0159
GLU 2030.0183
THR 2040.0222
ASN 2050.0246
ALA 2060.0309
ASP 2070.0333
PHE 2080.0375
GLY 2090.0393
PRO 2100.0384
GLY 2110.0389
ALA 2120.0303
TYR 2130.0242
HISH 2140.0268
GLY 2150.0257
SER 2160.0292
GLY 2170.0268
GLY 2180.0153
PRO 2190.0112
MET 2200.0097
ARG 2210.0106
VAL 2220.0112
GLU 2230.0119
ASN 2240.0087
PRO 2250.0074
ARG 2260.0076
TYR 2270.0037
THR 2280.0047
ASN 2290.0058
LYS 2300.0171
GLN 2310.0152
LEU 2320.0107
HISE 2330.0062
THR 2340.0095
ALA 2350.0067
PHE 2360.0043
PHE 2370.0071
LYS 2380.0068
ALA 2390.0057
ALA 2400.0084
GLU 2410.0120
GLU 2420.0103
VAL 2430.0111
GLY 2440.0146
LEU 2450.0139
THR 2460.0157
PRO 2470.0155
ASN 2480.0164
SER 2490.0175
ASP 2500.0161
PHE 2510.0120
ASN 2520.0121
ASP 2530.0133
TRP 2540.0114
SER 2550.0126
HISE 2560.0138
ASP 2570.0110
HISE 2580.0093
ALA 2590.0097
GLY 2600.0104
TYR 2610.0102
GLY 2620.0105
THR 2630.0076
PHE 2640.0070
GLN 2650.0078
VAL 2660.0075
MET 2670.0068
GLN 2680.0067
ASP 2690.0081
LYS 2700.0082
GLY 2710.0082
THR 2720.0057
ARG 2730.0057
ALA 2740.0060
ASP 2750.0043
MET 2760.0035
TYR 2770.0027
ARG 2780.0045
GLN 2790.0047
TYR 2800.0051
LEU 2810.0022
LYS 2820.0038
PRO 2830.0056
VAL 2840.0064
LEU 2850.0064
GLY 2860.0094
ARG 2870.0108
ARG 2880.0138
ASN 2890.0115
LEU 2900.0065
GLN 2910.0052
VAL 2920.0029
LEU 2930.0033
THR 2940.0026
GLY 2950.0026
ALA 2960.0048
ALA 2970.0049
VAL 2980.0051
THR 2990.0057
LYS 3000.0054
VAL 3010.0053
ASN 3020.0062
ILE 3030.0065
ASP 3040.0076
GLN 3050.0105
ALA 3060.0129
ALA 3070.0157
GLY 3080.0126
LYS 3090.0103
ALA 3100.0090
GLN 3110.0075
ALA 3120.0068
LEU 3130.0079
GLY 3140.0055
VAL 3150.0056
GLU 3160.0056
PHE 3170.0058
SER 3180.0066
THR 3190.0074
ASP 3200.0111
GLY 3210.0118
PRO 3220.0112
THR 3230.0134
GLY 3240.0126
GLU 3250.0095
ARG 3260.0068
LEU 3270.0064
SER 3280.0057
ALA 3290.0060
GLU 3300.0074
LEU 3310.0077
ALA 3320.0126
PRO 3330.0182
GLY 3340.0154
GLY 3350.0068
GLU 3360.0057
VAL 3370.0049
ILE 3380.0030
MET 3390.0033
CYS 3400.0035
ALA 3410.0033
GLY 3420.0031
ALA 3430.0029
VAL 3440.0033
HISD 3450.0037
THR 3460.0038
PRO 3470.0044
PHE 3480.0046
LEU 3490.0046
LEU 3500.0052
LYS 3510.0056
HISE 3520.0053
SER 3530.0054
GLY 3540.0060
VAL 3550.0065
GLY 3560.0076
PRO 3570.0091
SER 3580.0093
ALA 3590.0118
GLU 3600.0103
LEU 3610.0085
LYS 3620.0100
GLU 3630.0096
PHE 3640.0075
GLY 3650.0077
ILE 3660.0072
PRO 3670.0084
VAL 3680.0082
VAL 3690.0079
SER 3700.0084
ASN 3710.0076
LEU 3720.0074
ALA 3730.0079
GLY 3740.0065
VAL 3750.0061
GLY 3760.0054
GLN 3770.0053
ASN 3780.0055
LEU 3790.0055
GLN 3800.0042
ASP 3810.0037
GLN 3820.0035
PRO 3830.0042
ALA 3840.0033
CYS 3850.0034
LEU 3860.0018
THR 3870.0023
ALA 3880.0034
ALA 3890.0110
PRO 3900.0139
VAL 3910.0154
LYS 3920.0309
GLU 3930.0528
LYS 3940.0530
TYR 3950.0354
ASP 3960.0348
GLY 3970.0297
ILE 3980.0157
ALA 3990.0108
ILE 4000.0078
SER 4010.0067
ASP 4020.0085
HISE 4030.0098
ILE 4040.0078
TYR 4050.0076
ASN 4060.0093
GLU 4070.0105
LYS 4080.0114
GLY 4090.0078
GLN 4100.0096
ILE 4110.0082
ARG 4120.0098
LYS 4130.0100
ARG 4140.0143
ALA 4150.0096
ILE 4160.0107
ALA 4170.0154
SER 4180.0142
TYR 4190.0120
LEU 4200.0191
LEU 4210.0223
GLY 4220.0147
GLY 4230.0125
ARG 4240.0083
GLY 4250.0055
GLY 4260.0057
LEU 4270.0081
THR 4280.0066
SER 4290.0057
THR 4300.0052
GLY 4310.0032
CYS 4320.0032
ASP 4330.0034
ARG 4340.0040
GLY 4350.0048
ALA 4360.0056
PHE 4370.0060
VAL 4380.0061
ARG 4390.0055
THR 4400.0039
ALA 4410.0037
GLY 4420.0037
GLN 4430.0056
ALA 4440.0044
LEU 4450.0043
PRO 4460.0030
ASP 4470.0017
LEU 4480.0011
GLN 4490.0017
VAL 4500.0021
ARG 4510.0024
PHE 4520.0010
VAL 4530.0025
PRO 4540.0050
GLY 4550.0062
MET 4560.0062
ALA 4570.0055
LEU 4580.0059
ASP 4590.0048
PRO 4600.0042
ASP 4610.0041
GLY 4620.0039
VAL 4630.0031
SER 4640.0043
THR 4650.0044
TYR 4660.0033
VAL 4670.0029
ARG 4680.0037
PHE 4690.0034
ALA 4700.0030
LYS 4710.0036
PHE 4720.0029
GLN 4730.0051
SER 4740.0073
GLN 4750.0080
GLY 4760.0075
LEU 4770.0037
LYS 4780.0056
TRP 4790.0071
PRO 4800.0100
SER 4810.0124
GLY 4820.0096
ILE 4830.0064
THR 4840.0040
MET 4850.0007
GLN 4860.0009
LEU 4870.0007
ILE 4880.0015
ALA 4890.0022
CYS 4900.0022
ARG 4910.0036
PRO 4920.0060
GLN 4930.0091
SER 4940.0094
THR 4950.0083
GLY 4960.0068
SER 4970.0051
VAL 4980.0048
GLY 4990.0047
LEU 5000.0059
LYS 5010.0058
SER 5020.0064
ALA 5030.0068
ASP 5040.0070
PRO 5050.0070
PHE 5060.0064
ALA 5070.0059
PRO 5080.0052
PRO 5090.0043
LYS 5100.0038
LEU 5110.0041
SER 5120.0056
PRO 5130.0065
GLY 5140.0079
TYR 5150.0083
LEU 5160.0101
THR 5170.0117
ASP 5180.0176
LYS 5190.0180
ASP 5200.0189
GLY 5210.0141
ALA 5220.0115
ASP 5230.0086
LEU 5240.0093
ALA 5250.0085
THR 5260.0057
LEU 5270.0052
ARG 5280.0073
LYS 5290.0043
GLY 5300.0020
ILE 5310.0022
HISE 5320.0029
TRP 5330.0030
ALA 5340.0019
ARG 5350.0026
ASP 5360.0070
VAL 5370.0040
ALA 5380.0031
ARG 5390.0049
SER 5400.0037
SER 5410.0030
ALA 5420.0035
LEU 5430.0040
SER 5440.0068
GLU 5450.0136
TYR 5460.0149
LEU 5470.0140
ASP 5480.0156
GLY 5490.0151
GLU 5500.0118
LEU 5510.0039
PHE 5520.0031
PRO 5530.0027
GLY 5540.0046
SER 5550.0159
GLY 5560.0230
VAL 5570.0182
VAL 5580.0270
SER 5590.0271
ASP 5600.0252
ASP 5610.0209
GLN 5620.0169
ILE 5630.0116
ASP 5640.0120
GLU 5650.0111
TYR 5660.0083
ILE 5670.0076
ARG 5680.0084
ARG 5690.0060
SER 5700.0055
ILE 5710.0055
HISD 5720.0030
SER 5730.0030
SER 5740.0031
ASN 5750.0032
ALA 5760.0032
ILE 5770.0032
THR 5780.0034
GLY 5790.0035
THR 5800.0036
CYS 5810.0038
LYS 5820.0034
MET 5830.0029
GLY 5840.0028
ASN 5850.0038
ALA 5860.0057
GLY 5870.0108
ASP 5880.0090
SER 5890.0085
SER 5900.0069
SER 5910.0056
VAL 5920.0051
VAL 5930.0027
ASP 5940.0021
ASN 5950.0025
GLN 5960.0021
LEU 5970.0021
ARG 5980.0022
VAL 5990.0050
HISE 6000.0058
GLY 6010.0062
VAL 6020.0070
GLU 6030.0064
GLY 6040.0047
LEU 6050.0030
ARG 6060.0032
VAL 6070.0035
VAL 6080.0017
ASP 6090.0019
ALA 6100.0023
SER 6110.0022
VAL 6120.0021
VAL 6130.0022
PRO 6140.0029
LYS 6150.0028
ILE 6160.0027
PRO 6170.0017
GLY 6180.0014
GLY 6190.0016
GLN 6200.0026
THR 6210.0031
GLY 6220.0040
ALA 6230.0054
PRO 6240.0051
VAL 6250.0044
VAL 6260.0054
MET 6270.0062
ILE 6280.0054
ALA 6290.0055
GLU 6300.0069
ARG 6310.0066
ALA 6320.0056
ALA 6330.0053
ALA 6340.0067
LEU 6350.0060
LEU 6360.0052
THR 6370.0055
GLY 6380.0081
LYS 6390.0094
ALA 6400.0084
THR 6410.0018
ILE 6420.0028
GLY 6430.0086
ALA 6440.0201
SER 6450.0191
ALA 6460.0131
ALA 6470.0225
ALA 6480.0162
PRO 6490.0333

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.