CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0451
SER 770.0144
PRO 780.0093
VAL 790.0050
ALA 800.0081
GLY 810.0066
GLN 820.0033
LYS 830.0043
TYR 840.0040
ASP 850.0052
TYR 860.0042
ILE 870.0042
LEU 880.0047
VAL 890.0054
GLY 900.0055
GLY 910.0058
GLY 920.0050
THR 930.0041
ALA 940.0031
ALA 950.0038
CYS 960.0041
VAL 970.0029
LEU 980.0032
ALA 990.0032
ASN 1000.0037
ARG 1010.0025
LEU 1020.0029
SER 1030.0035
ALA 1040.0036
ASP 1050.0046
GLY 1060.0060
SER 1070.0046
LYS 1080.0042
ARG 1090.0045
VAL 1100.0030
LEU 1110.0029
VAL 1120.0040
LEU 1130.0036
GLU 1140.0045
ALA 1150.0038
GLY 1160.0046
PRO 1170.0042
ASP 1180.0054
ASN 1190.0086
THR 1200.0098
SER 1210.0112
ARG 1220.0128
ASP 1230.0133
VAL 1240.0114
LYS 1250.0120
ILE 1260.0132
PRO 1270.0125
ALA 1280.0125
ALA 1290.0116
ILE 1300.0113
THR 1310.0091
ARG 1320.0081
LEU 1330.0086
PHE 1340.0084
ARG 1350.0078
SER 1360.0067
PRO 1370.0054
LEU 1380.0067
ASP 1390.0092
TRP 1400.0103
ASN 1410.0114
LEU 1420.0126
PHE 1430.0116
SER 1440.0111
GLU 1450.0105
LEU 1460.0069
GLN 1470.0063
GLU 1480.0053
GLN 1490.0063
LEU 1500.0064
ALA 1510.0048
GLU 1520.0050
ARG 1530.0063
GLN 1540.0081
ILE 1550.0082
TYR 1560.0095
MET 1570.0099
ALA 1580.0102
ARG 1590.0090
GLY 1600.0079
ARG 1610.0075
LEU 1620.0061
LEU 1630.0067
GLY 1640.0066
GLY 1650.0063
SER 1660.0073
SER 1670.0084
ALA 1680.0087
THR 1690.0097
ASN 1700.0084
ALA 1710.0085
THR 1720.0077
LEU 1730.0101
TYR 1740.0105
HISD 1750.0105
ARG 1760.0109
GLY 1770.0091
ALA 1780.0077
ALA 1790.0071
GLY 1800.0059
ASP 1810.0082
TYR 1820.0076
ASP 1830.0066
ALA 1840.0071
TRP 1850.0080
GLY 1860.0077
VAL 1870.0067
GLU 1880.0053
GLY 1890.0048
TRP 1900.0060
SER 1910.0075
SER 1920.0076
GLU 1930.0072
ASP 1940.0075
VAL 1950.0079
LEU 1960.0077
SER 1970.0074
TRP 1980.0077
PHE 1990.0084
VAL 2000.0105
GLN 2010.0103
ALA 2020.0099
GLU 2030.0124
THR 2040.0126
ASN 2050.0124
ALA 2060.0154
ASP 2070.0152
PHE 2080.0167
GLY 2090.0177
PRO 2100.0180
GLY 2110.0180
ALA 2120.0153
TYR 2130.0146
HISH 2140.0147
GLY 2150.0138
SER 2160.0149
GLY 2170.0139
GLY 2180.0080
PRO 2190.0064
MET 2200.0064
ARG 2210.0066
VAL 2220.0079
GLU 2230.0068
ASN 2240.0080
PRO 2250.0072
ARG 2260.0026
TYR 2270.0066
THR 2280.0061
ASN 2290.0061
LYS 2300.0084
GLN 2310.0078
LEU 2320.0064
HISE 2330.0095
THR 2340.0112
ALA 2350.0088
PHE 2360.0079
PHE 2370.0120
LYS 2380.0115
ALA 2390.0081
ALA 2400.0098
GLU 2410.0134
GLU 2420.0130
VAL 2430.0100
GLY 2440.0136
LEU 2450.0110
THR 2460.0150
PRO 2470.0170
ASN 2480.0170
SER 2490.0191
ASP 2500.0178
PHE 2510.0139
ASN 2520.0138
ASP 2530.0134
TRP 2540.0101
SER 2550.0102
HISE 2560.0106
ASP 2570.0112
HISE 2580.0109
ALA 2590.0095
GLY 2600.0131
TYR 2610.0131
GLY 2620.0163
THR 2630.0120
PHE 2640.0121
GLN 2650.0120
VAL 2660.0080
MET 2670.0075
GLN 2680.0058
ASP 2690.0052
LYS 2700.0060
GLY 2710.0078
THR 2720.0090
ARG 2730.0092
ALA 2740.0084
ASP 2750.0071
MET 2760.0061
TYR 2770.0069
ARG 2780.0080
GLN 2790.0057
TYR 2800.0055
LEU 2810.0060
LYS 2820.0076
PRO 2830.0074
VAL 2840.0063
LEU 2850.0075
GLY 2860.0083
ARG 2870.0084
ARG 2880.0092
ASN 2890.0059
LEU 2900.0046
GLN 2910.0040
VAL 2920.0046
LEU 2930.0034
THR 2940.0039
GLY 2950.0024
ALA 2960.0020
ALA 2970.0033
VAL 2980.0070
THR 2990.0103
LYS 3000.0096
VAL 3010.0086
ASN 3020.0080
ILE 3030.0076
ASP 3040.0089
GLN 3050.0122
ALA 3060.0151
ALA 3070.0177
GLY 3080.0154
LYS 3090.0101
ALA 3100.0088
GLN 3110.0084
ALA 3120.0074
LEU 3130.0086
GLY 3140.0079
VAL 3150.0077
GLU 3160.0079
PHE 3170.0069
SER 3180.0082
THR 3190.0109
ASP 3200.0262
GLY 3210.0168
PRO 3220.0143
THR 3230.0372
GLY 3240.0362
GLU 3250.0364
ARG 3260.0158
LEU 3270.0107
SER 3280.0084
ALA 3290.0040
GLU 3300.0051
LEU 3310.0060
ALA 3320.0068
PRO 3330.0103
GLY 3340.0113
GLY 3350.0062
GLU 3360.0062
VAL 3370.0065
ILE 3380.0045
MET 3390.0050
CYS 3400.0049
ALA 3410.0075
GLY 3420.0072
ALA 3430.0063
VAL 3440.0092
HISD 3450.0088
THR 3460.0070
PRO 3470.0075
PHE 3480.0090
LEU 3490.0087
LEU 3500.0072
LYS 3510.0075
HISE 3520.0100
SER 3530.0095
GLY 3540.0076
VAL 3550.0053
GLY 3560.0045
PRO 3570.0052
SER 3580.0091
ALA 3590.0090
GLU 3600.0060
LEU 3610.0093
LYS 3620.0135
GLU 3630.0118
PHE 3640.0148
GLY 3650.0174
ILE 3660.0156
PRO 3670.0165
VAL 3680.0111
VAL 3690.0087
SER 3700.0062
ASN 3710.0072
LEU 3720.0050
ALA 3730.0060
GLY 3740.0046
VAL 3750.0042
GLY 3760.0063
GLN 3770.0052
ASN 3780.0067
LEU 3790.0079
GLN 3800.0071
ASP 3810.0074
GLN 3820.0080
PRO 3830.0093
ALA 3840.0090
CYS 3850.0088
LEU 3860.0092
THR 3870.0091
ALA 3880.0092
ALA 3890.0060
PRO 3900.0061
VAL 3910.0040
LYS 3920.0095
GLU 3930.0162
LYS 3940.0135
TYR 3950.0062
ASP 3960.0040
GLY 3970.0027
ILE 3980.0019
ALA 3990.0044
ILE 4000.0065
SER 4010.0089
ASP 4020.0079
HISE 4030.0076
ILE 4040.0111
TYR 4050.0109
ASN 4060.0128
GLU 4070.0152
LYS 4080.0145
GLY 4090.0094
GLN 4100.0117
ILE 4110.0114
ARG 4120.0130
LYS 4130.0216
ARG 4140.0243
ALA 4150.0173
ILE 4160.0111
ALA 4170.0126
SER 4180.0164
TYR 4190.0148
LEU 4200.0279
LEU 4210.0319
GLY 4220.0209
GLY 4230.0156
ARG 4240.0072
GLY 4250.0080
GLY 4260.0094
LEU 4270.0114
THR 4280.0082
SER 4290.0084
THR 4300.0097
GLY 4310.0086
CYS 4320.0099
ASP 4330.0105
ARG 4340.0114
GLY 4350.0111
ALA 4360.0112
PHE 4370.0093
VAL 4380.0059
ARG 4390.0038
THR 4400.0066
ALA 4410.0107
GLY 4420.0131
GLN 4430.0268
ALA 4440.0141
LEU 4450.0025
PRO 4460.0043
ASP 4470.0062
LEU 4480.0074
GLN 4490.0072
VAL 4500.0073
ARG 4510.0079
PHE 4520.0086
VAL 4530.0086
PRO 4540.0069
GLY 4550.0068
MET 4560.0073
ALA 4570.0090
LEU 4580.0058
ASP 4590.0056
PRO 4600.0072
ASP 4610.0056
GLY 4620.0080
VAL 4630.0081
SER 4640.0068
THR 4650.0064
TYR 4660.0056
VAL 4670.0057
ARG 4680.0048
PHE 4690.0051
ALA 4700.0042
LYS 4710.0030
PHE 4720.0037
GLN 4730.0051
SER 4740.0050
GLN 4750.0065
GLY 4760.0073
LEU 4770.0075
LYS 4780.0088
TRP 4790.0051
PRO 4800.0060
SER 4810.0059
GLY 4820.0042
ILE 4830.0046
THR 4840.0066
MET 4850.0066
GLN 4860.0074
LEU 4870.0076
ILE 4880.0082
ALA 4890.0082
CYS 4900.0083
ARG 4910.0089
PRO 4920.0100
GLN 4930.0110
SER 4940.0100
THR 4950.0090
GLY 4960.0079
SER 4970.0076
VAL 4980.0087
GLY 4990.0081
LEU 5000.0129
LYS 5010.0151
SER 5020.0151
ALA 5030.0178
ASP 5040.0160
PRO 5050.0141
PHE 5060.0124
ALA 5070.0149
PRO 5080.0155
PRO 5090.0123
LYS 5100.0118
LEU 5110.0119
SER 5120.0080
PRO 5130.0095
GLY 5140.0085
TYR 5150.0093
LEU 5160.0094
THR 5170.0091
ASP 5180.0117
LYS 5190.0113
ASP 5200.0113
GLY 5210.0113
ALA 5220.0113
ASP 5230.0109
LEU 5240.0098
ALA 5250.0097
THR 5260.0096
LEU 5270.0099
ARG 5280.0101
LYS 5290.0100
GLY 5300.0099
ILE 5310.0105
HISE 5320.0105
TRP 5330.0048
ALA 5340.0073
ARG 5350.0069
ASP 5360.0041
VAL 5370.0038
ALA 5380.0035
ARG 5390.0059
SER 5400.0078
SER 5410.0102
ALA 5420.0094
LEU 5430.0056
SER 5440.0062
GLU 5450.0094
TYR 5460.0050
LEU 5470.0046
ASP 5480.0079
GLY 5490.0094
GLU 5500.0099
LEU 5510.0128
PHE 5520.0120
PRO 5530.0119
GLY 5540.0190
SER 5550.0235
GLY 5560.0175
VAL 5570.0257
VAL 5580.0451
SER 5590.0435
ASP 5600.0318
ASP 5610.0251
GLN 5620.0200
ILE 5630.0143
ASP 5640.0089
GLU 5650.0074
TYR 5660.0093
ILE 5670.0092
ARG 5680.0075
ARG 5690.0074
SER 5700.0083
ILE 5710.0084
HISD 5720.0065
SER 5730.0071
SER 5740.0084
ASN 5750.0063
ALA 5760.0075
ILE 5770.0068
THR 5780.0062
GLY 5790.0057
THR 5800.0054
CYS 5810.0035
LYS 5820.0049
MET 5830.0042
GLY 5840.0071
ASN 5850.0077
ALA 5860.0100
GLY 5870.0177
ASP 5880.0146
SER 5890.0114
SER 5900.0093
SER 5910.0069
VAL 5920.0039
VAL 5930.0027
ASP 5940.0031
ASN 5950.0036
GLN 5960.0025
LEU 5970.0025
ARG 5980.0029
VAL 5990.0036
HISE 6000.0051
GLY 6010.0067
VAL 6020.0058
GLU 6030.0062
GLY 6040.0067
LEU 6050.0045
ARG 6060.0042
VAL 6070.0044
VAL 6080.0016
ASP 6090.0027
ALA 6100.0039
SER 6110.0037
VAL 6120.0039
VAL 6130.0053
PRO 6140.0065
LYS 6150.0077
ILE 6160.0081
PRO 6170.0067
GLY 6180.0067
GLY 6190.0070
GLN 6200.0038
THR 6210.0041
GLY 6220.0071
ALA 6230.0051
PRO 6240.0054
VAL 6250.0047
VAL 6260.0046
MET 6270.0042
ILE 6280.0040
ALA 6290.0030
GLU 6300.0031
ARG 6310.0037
ALA 6320.0011
ALA 6330.0015
ALA 6340.0013
LEU 6350.0026
LEU 6360.0030
THR 6370.0036
GLY 6380.0034
LYS 6390.0038
ALA 6400.0031
THR 6410.0042
ILE 6420.0036
GLY 6430.0039
ALA 6440.0111
SER 6450.0098
ALA 6460.0064
ALA 6470.0096
ALA 6480.0025
PRO 6490.0132

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.