CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0384
SER 770.0322
PRO 780.0233
VAL 790.0171
ALA 800.0255
GLY 810.0272
GLN 820.0195
LYS 830.0159
TYR 840.0094
ASP 850.0101
TYR 860.0049
ILE 870.0031
LEU 880.0034
VAL 890.0032
GLY 900.0040
GLY 910.0046
GLY 920.0024
THR 930.0032
ALA 940.0033
ALA 950.0030
CYS 960.0031
VAL 970.0034
LEU 980.0042
ALA 990.0032
ASN 1000.0047
ARG 1010.0047
LEU 1020.0044
SER 1030.0041
ALA 1040.0073
ASP 1050.0071
GLY 1060.0042
SER 1070.0077
LYS 1080.0072
ARG 1090.0068
VAL 1100.0022
LEU 1110.0021
VAL 1120.0033
LEU 1130.0039
GLU 1140.0050
ALA 1150.0053
GLY 1160.0060
PRO 1170.0059
ASP 1180.0058
ASN 1190.0059
THR 1200.0077
SER 1210.0078
ARG 1220.0078
ASP 1230.0076
VAL 1240.0054
LYS 1250.0055
ILE 1260.0062
PRO 1270.0061
ALA 1280.0075
ALA 1290.0068
ILE 1300.0067
THR 1310.0070
ARG 1320.0059
LEU 1330.0065
PHE 1340.0080
ARG 1350.0078
SER 1360.0074
PRO 1370.0059
LEU 1380.0060
ASP 1390.0068
TRP 1400.0056
ASN 1410.0069
LEU 1420.0052
PHE 1430.0093
SER 1440.0083
GLU 1450.0127
LEU 1460.0273
GLN 1470.0197
GLU 1480.0301
GLN 1490.0133
LEU 1500.0113
ALA 1510.0186
GLU 1520.0317
ARG 1530.0254
GLN 1540.0194
ILE 1550.0101
TYR 1560.0094
MET 1570.0063
ALA 1580.0066
ARG 1590.0052
GLY 1600.0058
ARG 1610.0054
LEU 1620.0052
LEU 1630.0053
GLY 1640.0037
GLY 1650.0037
SER 1660.0035
SER 1670.0019
ALA 1680.0029
THR 1690.0033
ASN 1700.0015
ALA 1710.0020
THR 1720.0020
LEU 1730.0052
TYR 1740.0048
HISD 1750.0043
ARG 1760.0050
GLY 1770.0061
ALA 1780.0067
ALA 1790.0088
GLY 1800.0103
ASP 1810.0088
TYR 1820.0082
ASP 1830.0105
ALA 1840.0107
TRP 1850.0068
GLY 1860.0076
VAL 1870.0067
GLU 1880.0072
GLY 1890.0076
TRP 1900.0065
SER 1910.0102
SER 1920.0096
GLU 1930.0116
ASP 1940.0094
VAL 1950.0077
LEU 1960.0083
SER 1970.0079
TRP 1980.0068
PHE 1990.0058
VAL 2000.0052
GLN 2010.0057
ALA 2020.0048
GLU 2030.0052
THR 2040.0087
ASN 2050.0118
ALA 2060.0159
ASP 2070.0173
PHE 2080.0170
GLY 2090.0212
PRO 2100.0196
GLY 2110.0195
ALA 2120.0153
TYR 2130.0100
HISH 2140.0122
GLY 2150.0089
SER 2160.0101
GLY 2170.0100
GLY 2180.0033
PRO 2190.0038
MET 2200.0044
ARG 2210.0050
VAL 2220.0064
GLU 2230.0074
ASN 2240.0058
PRO 2250.0058
ARG 2260.0046
TYR 2270.0037
THR 2280.0035
ASN 2290.0039
LYS 2300.0045
GLN 2310.0064
LEU 2320.0054
HISE 2330.0045
THR 2340.0057
ALA 2350.0075
PHE 2360.0048
PHE 2370.0049
LYS 2380.0078
ALA 2390.0078
ALA 2400.0071
GLU 2410.0081
GLU 2420.0129
VAL 2430.0116
GLY 2440.0129
LEU 2450.0054
THR 2460.0053
PRO 2470.0059
ASN 2480.0071
SER 2490.0071
ASP 2500.0072
PHE 2510.0057
ASN 2520.0057
ASP 2530.0056
TRP 2540.0068
SER 2550.0071
HISE 2560.0070
ASP 2570.0069
HISE 2580.0065
ALA 2590.0077
GLY 2600.0053
TYR 2610.0056
GLY 2620.0060
THR 2630.0049
PHE 2640.0052
GLN 2650.0058
VAL 2660.0047
MET 2670.0038
GLN 2680.0032
ASP 2690.0035
LYS 2700.0029
GLY 2710.0043
THR 2720.0017
ARG 2730.0017
ALA 2740.0010
ASP 2750.0022
MET 2760.0024
TYR 2770.0029
ARG 2780.0018
GLN 2790.0020
TYR 2800.0020
LEU 2810.0053
LYS 2820.0070
PRO 2830.0089
VAL 2840.0090
LEU 2850.0085
GLY 2860.0101
ARG 2870.0088
ARG 2880.0093
ASN 2890.0070
LEU 2900.0048
GLN 2910.0064
VAL 2920.0071
LEU 2930.0078
THR 2940.0084
GLY 2950.0083
ALA 2960.0071
ALA 2970.0049
VAL 2980.0036
THR 2990.0063
LYS 3000.0057
VAL 3010.0052
ASN 3020.0103
ILE 3030.0098
ASP 3040.0135
GLN 3050.0249
ALA 3060.0306
ALA 3070.0373
GLY 3080.0269
LYS 3090.0202
ALA 3100.0174
GLN 3110.0112
ALA 3120.0077
LEU 3130.0108
GLY 3140.0047
VAL 3150.0048
GLU 3160.0050
PHE 3170.0029
SER 3180.0046
THR 3190.0108
ASP 3200.0119
GLY 3210.0046
PRO 3220.0160
THR 3230.0257
GLY 3240.0175
GLU 3250.0294
ARG 3260.0081
LEU 3270.0090
SER 3280.0085
ALA 3290.0060
GLU 3300.0080
LEU 3310.0075
ALA 3320.0174
PRO 3330.0245
GLY 3340.0232
GLY 3350.0081
GLU 3360.0070
VAL 3370.0050
ILE 3380.0045
MET 3390.0043
CYS 3400.0044
ALA 3410.0042
GLY 3420.0041
ALA 3430.0038
VAL 3440.0027
HISD 3450.0026
THR 3460.0037
PRO 3470.0041
PHE 3480.0031
LEU 3490.0040
LEU 3500.0042
LYS 3510.0035
HISE 3520.0043
SER 3530.0064
GLY 3540.0060
VAL 3550.0049
GLY 3560.0051
PRO 3570.0056
SER 3580.0054
ALA 3590.0043
GLU 3600.0051
LEU 3610.0043
LYS 3620.0053
GLU 3630.0081
PHE 3640.0088
GLY 3650.0109
ILE 3660.0096
PRO 3670.0114
VAL 3680.0095
VAL 3690.0110
SER 3700.0096
ASN 3710.0086
LEU 3720.0079
ALA 3730.0080
GLY 3740.0073
VAL 3750.0060
GLY 3760.0058
GLN 3770.0070
ASN 3780.0068
LEU 3790.0060
GLN 3800.0063
ASP 3810.0065
GLN 3820.0073
PRO 3830.0085
ALA 3840.0093
CYS 3850.0101
LEU 3860.0083
THR 3870.0058
ALA 3880.0041
ALA 3890.0038
PRO 3900.0082
VAL 3910.0107
LYS 3920.0256
GLU 3930.0297
LYS 3940.0286
TYR 3950.0176
ASP 3960.0188
GLY 3970.0157
ILE 3980.0067
ALA 3990.0061
ILE 4000.0060
SER 4010.0057
ASP 4020.0051
HISE 4030.0056
ILE 4040.0069
TYR 4050.0072
ASN 4060.0094
GLU 4070.0153
LYS 4080.0191
GLY 4090.0121
GLN 4100.0137
ILE 4110.0120
ARG 4120.0102
LYS 4130.0113
ARG 4140.0126
ALA 4150.0119
ILE 4160.0105
ALA 4170.0103
SER 4180.0098
TYR 4190.0093
LEU 4200.0117
LEU 4210.0127
GLY 4220.0076
GLY 4230.0078
ARG 4240.0065
GLY 4250.0060
GLY 4260.0068
LEU 4270.0090
THR 4280.0056
SER 4290.0047
THR 4300.0040
GLY 4310.0034
CYS 4320.0033
ASP 4330.0034
ARG 4340.0048
GLY 4350.0044
ALA 4360.0038
PHE 4370.0084
VAL 4380.0104
ARG 4390.0114
THR 4400.0119
ALA 4410.0092
GLY 4420.0135
GLN 4430.0379
ALA 4440.0256
LEU 4450.0126
PRO 4460.0089
ASP 4470.0073
LEU 4480.0073
GLN 4490.0061
VAL 4500.0060
ARG 4510.0060
PHE 4520.0022
VAL 4530.0032
PRO 4540.0042
GLY 4550.0047
MET 4560.0047
ALA 4570.0058
LEU 4580.0071
ASP 4590.0080
PRO 4600.0081
ASP 4610.0098
GLY 4620.0100
VAL 4630.0101
SER 4640.0082
THR 4650.0074
TYR 4660.0060
VAL 4670.0065
ARG 4680.0059
PHE 4690.0051
ALA 4700.0068
LYS 4710.0052
PHE 4720.0050
GLN 4730.0090
SER 4740.0126
GLN 4750.0139
GLY 4760.0125
LEU 4770.0096
LYS 4780.0086
TRP 4790.0042
PRO 4800.0056
SER 4810.0065
GLY 4820.0066
ILE 4830.0031
THR 4840.0030
MET 4850.0052
GLN 4860.0074
LEU 4870.0087
ILE 4880.0087
ALA 4890.0085
CYS 4900.0083
ARG 4910.0082
PRO 4920.0077
GLN 4930.0076
SER 4940.0084
THR 4950.0083
GLY 4960.0080
SER 4970.0080
VAL 4980.0058
GLY 4990.0057
LEU 5000.0030
LYS 5010.0044
SER 5020.0038
ALA 5030.0065
ASP 5040.0075
PRO 5050.0071
PHE 5060.0058
ALA 5070.0049
PRO 5080.0056
PRO 5090.0029
LYS 5100.0067
LEU 5110.0061
SER 5120.0098
PRO 5130.0072
GLY 5140.0091
TYR 5150.0070
LEU 5160.0070
THR 5170.0085
ASP 5180.0086
LYS 5190.0132
ASP 5200.0135
GLY 5210.0091
ALA 5220.0086
ASP 5230.0083
LEU 5240.0103
ALA 5250.0103
THR 5260.0095
LEU 5270.0108
ARG 5280.0116
LYS 5290.0105
GLY 5300.0097
ILE 5310.0093
HISE 5320.0091
TRP 5330.0071
ALA 5340.0051
ARG 5350.0047
ASP 5360.0095
VAL 5370.0071
ALA 5380.0060
ARG 5390.0107
SER 5400.0133
SER 5410.0170
ALA 5420.0134
LEU 5430.0105
SER 5440.0138
GLU 5450.0179
TYR 5460.0131
LEU 5470.0129
ASP 5480.0155
GLY 5490.0127
GLU 5500.0059
LEU 5510.0033
PHE 5520.0057
PRO 5530.0050
GLY 5540.0125
SER 5550.0331
GLY 5560.0384
VAL 5570.0176
VAL 5580.0316
SER 5590.0189
ASP 5600.0109
ASP 5610.0187
GLN 5620.0163
ILE 5630.0114
ASP 5640.0140
GLU 5650.0146
TYR 5660.0108
ILE 5670.0111
ARG 5680.0105
ARG 5690.0111
SER 5700.0114
ILE 5710.0105
HISD 5720.0072
SER 5730.0069
SER 5740.0084
ASN 5750.0060
ALA 5760.0065
ILE 5770.0053
THR 5780.0050
GLY 5790.0058
THR 5800.0056
CYS 5810.0042
LYS 5820.0034
MET 5830.0046
GLY 5840.0030
ASN 5850.0054
ALA 5860.0111
GLY 5870.0206
ASP 5880.0155
SER 5890.0139
SER 5900.0085
SER 5910.0069
VAL 5920.0066
VAL 5930.0040
ASP 5940.0032
ASN 5950.0034
GLN 5960.0025
LEU 5970.0027
ARG 5980.0032
VAL 5990.0066
HISE 6000.0084
GLY 6010.0100
VAL 6020.0090
GLU 6030.0085
GLY 6040.0049
LEU 6050.0041
ARG 6060.0037
VAL 6070.0037
VAL 6080.0041
ASP 6090.0043
ALA 6100.0046
SER 6110.0043
VAL 6120.0043
VAL 6130.0044
PRO 6140.0054
LYS 6150.0062
ILE 6160.0064
PRO 6170.0061
GLY 6180.0072
GLY 6190.0068
GLN 6200.0057
THR 6210.0051
GLY 6220.0050
ALA 6230.0045
PRO 6240.0042
VAL 6250.0044
VAL 6260.0039
MET 6270.0045
ILE 6280.0045
ALA 6290.0046
GLU 6300.0047
ARG 6310.0055
ALA 6320.0057
ALA 6330.0068
ALA 6340.0087
LEU 6350.0081
LEU 6360.0087
THR 6370.0116
GLY 6380.0168
LYS 6390.0180
ALA 6400.0108
THR 6410.0072
ILE 6420.0056
GLY 6430.0068
ALA 6440.0157
SER 6450.0228
ALA 6460.0249
ALA 6470.0272
ALA 6480.0184
PRO 6490.0089

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.