CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 36  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0455
SER 770.0143
PRO 780.0117
VAL 790.0089
ALA 800.0099
GLY 810.0153
GLN 820.0139
LYS 830.0132
TYR 840.0091
ASP 850.0084
TYR 860.0040
ILE 870.0046
LEU 880.0040
VAL 890.0045
GLY 900.0043
GLY 910.0045
GLY 920.0049
THR 930.0040
ALA 940.0032
ALA 950.0035
CYS 960.0026
VAL 970.0021
LEU 980.0015
ALA 990.0011
ASN 1000.0008
ARG 1010.0019
LEU 1020.0006
SER 1030.0023
ALA 1040.0068
ASP 1050.0069
GLY 1060.0104
SER 1070.0084
LYS 1080.0062
ARG 1090.0088
VAL 1100.0049
LEU 1110.0048
VAL 1120.0040
LEU 1130.0044
GLU 1140.0048
ALA 1150.0041
GLY 1160.0068
PRO 1170.0067
ASP 1180.0062
ASN 1190.0065
THR 1200.0072
SER 1210.0081
ARG 1220.0080
ASP 1230.0072
VAL 1240.0049
LYS 1250.0038
ILE 1260.0038
PRO 1270.0019
ALA 1280.0027
ALA 1290.0034
ILE 1300.0048
THR 1310.0037
ARG 1320.0038
LEU 1330.0056
PHE 1340.0044
ARG 1350.0045
SER 1360.0044
PRO 1370.0063
LEU 1380.0065
ASP 1390.0066
TRP 1400.0055
ASN 1410.0052
LEU 1420.0058
PHE 1430.0081
SER 1440.0097
GLU 1450.0127
LEU 1460.0229
GLN 1470.0186
GLU 1480.0272
GLN 1490.0140
LEU 1500.0112
ALA 1510.0166
GLU 1520.0275
ARG 1530.0205
GLN 1540.0142
ILE 1550.0072
TYR 1560.0058
MET 1570.0045
ALA 1580.0049
ARG 1590.0053
GLY 1600.0057
ARG 1610.0065
LEU 1620.0063
LEU 1630.0059
GLY 1640.0057
GLY 1650.0060
SER 1660.0062
SER 1670.0053
ALA 1680.0051
THR 1690.0060
ASN 1700.0045
ALA 1710.0037
THR 1720.0036
LEU 1730.0034
TYR 1740.0030
HISD 1750.0020
ARG 1760.0043
GLY 1770.0055
ALA 1780.0073
ALA 1790.0087
GLY 1800.0089
ASP 1810.0078
TYR 1820.0081
ASP 1830.0100
ALA 1840.0102
TRP 1850.0085
GLY 1860.0097
VAL 1870.0088
GLU 1880.0091
GLY 1890.0080
TRP 1900.0070
SER 1910.0097
SER 1920.0092
GLU 1930.0096
ASP 1940.0085
VAL 1950.0069
LEU 1960.0069
SER 1970.0057
TRP 1980.0052
PHE 1990.0046
VAL 2000.0041
GLN 2010.0050
ALA 2020.0051
GLU 2030.0055
THR 2040.0086
ASN 2050.0096
ALA 2060.0164
ASP 2070.0174
PHE 2080.0171
GLY 2090.0171
PRO 2100.0129
GLY 2110.0125
ALA 2120.0117
TYR 2130.0086
HISH 2140.0088
GLY 2150.0064
SER 2160.0075
GLY 2170.0101
GLY 2180.0059
PRO 2190.0057
MET 2200.0048
ARG 2210.0049
VAL 2220.0052
GLU 2230.0047
ASN 2240.0074
PRO 2250.0069
ARG 2260.0072
TYR 2270.0075
THR 2280.0057
ASN 2290.0037
LYS 2300.0070
GLN 2310.0090
LEU 2320.0059
HISE 2330.0051
THR 2340.0087
ALA 2350.0096
PHE 2360.0071
PHE 2370.0084
LYS 2380.0123
ALA 2390.0117
ALA 2400.0105
GLU 2410.0137
GLU 2420.0166
VAL 2430.0160
GLY 2440.0163
LEU 2450.0088
THR 2460.0071
PRO 2470.0039
ASN 2480.0037
SER 2490.0042
ASP 2500.0036
PHE 2510.0035
ASN 2520.0038
ASP 2530.0060
TRP 2540.0078
SER 2550.0091
HISE 2560.0084
ASP 2570.0059
HISE 2580.0061
ALA 2590.0062
GLY 2600.0058
TYR 2610.0036
GLY 2620.0006
THR 2630.0025
PHE 2640.0029
GLN 2650.0041
VAL 2660.0042
MET 2670.0040
GLN 2680.0030
ASP 2690.0030
LYS 2700.0061
GLY 2710.0052
THR 2720.0022
ARG 2730.0013
ALA 2740.0021
ASP 2750.0031
MET 2760.0032
TYR 2770.0030
ARG 2780.0016
GLN 2790.0017
TYR 2800.0019
LEU 2810.0012
LYS 2820.0030
PRO 2830.0042
VAL 2840.0057
LEU 2850.0064
GLY 2860.0104
ARG 2870.0133
ARG 2880.0167
ASN 2890.0123
LEU 2900.0060
GLN 2910.0062
VAL 2920.0049
LEU 2930.0042
THR 2940.0044
GLY 2950.0031
ALA 2960.0023
ALA 2970.0030
VAL 2980.0039
THR 2990.0053
LYS 3000.0054
VAL 3010.0054
ASN 3020.0050
ILE 3030.0026
ASP 3040.0022
GLN 3050.0092
ALA 3060.0197
ALA 3070.0322
GLY 3080.0268
LYS 3090.0150
ALA 3100.0083
GLN 3110.0056
ALA 3120.0047
LEU 3130.0086
GLY 3140.0056
VAL 3150.0048
GLU 3160.0038
PHE 3170.0039
SER 3180.0085
THR 3190.0111
ASP 3200.0194
GLY 3210.0160
PRO 3220.0267
THR 3230.0455
GLY 3240.0374
GLU 3250.0404
ARG 3260.0105
LEU 3270.0071
SER 3280.0031
ALA 3290.0042
GLU 3300.0072
LEU 3310.0079
ALA 3320.0147
PRO 3330.0213
GLY 3340.0162
GLY 3350.0060
GLU 3360.0055
VAL 3370.0049
ILE 3380.0041
MET 3390.0041
CYS 3400.0044
ALA 3410.0047
GLY 3420.0047
ALA 3430.0044
VAL 3440.0054
HISD 3450.0049
THR 3460.0042
PRO 3470.0042
PHE 3480.0039
LEU 3490.0038
LEU 3500.0024
LYS 3510.0019
HISE 3520.0019
SER 3530.0022
GLY 3540.0014
VAL 3550.0017
GLY 3560.0031
PRO 3570.0053
SER 3580.0064
ALA 3590.0083
GLU 3600.0057
LEU 3610.0049
LYS 3620.0074
GLU 3630.0068
PHE 3640.0048
GLY 3650.0070
ILE 3660.0051
PRO 3670.0062
VAL 3680.0054
VAL 3690.0043
SER 3700.0055
ASN 3710.0051
LEU 3720.0046
ALA 3730.0056
GLY 3740.0024
VAL 3750.0010
GLY 3760.0030
GLN 3770.0030
ASN 3780.0028
LEU 3790.0045
GLN 3800.0037
ASP 3810.0035
GLN 3820.0023
PRO 3830.0009
ALA 3840.0002
CYS 3850.0013
LEU 3860.0032
THR 3870.0029
ALA 3880.0033
ALA 3890.0057
PRO 3900.0056
VAL 3910.0050
LYS 3920.0093
GLU 3930.0198
LYS 3940.0214
TYR 3950.0096
ASP 3960.0089
GLY 3970.0044
ILE 3980.0047
ALA 3990.0049
ILE 4000.0060
SER 4010.0083
ASP 4020.0077
HISE 4030.0063
ILE 4040.0059
TYR 4050.0078
ASN 4060.0123
GLU 4070.0275
LYS 4080.0284
GLY 4090.0161
GLN 4100.0126
ILE 4110.0060
ARG 4120.0032
LYS 4130.0212
ARG 4140.0128
ALA 4150.0040
ILE 4160.0142
ALA 4170.0122
SER 4180.0139
TYR 4190.0157
LEU 4200.0320
LEU 4210.0413
GLY 4220.0290
GLY 4230.0192
ARG 4240.0138
GLY 4250.0066
GLY 4260.0049
LEU 4270.0041
THR 4280.0044
SER 4290.0044
THR 4300.0041
GLY 4310.0034
CYS 4320.0033
ASP 4330.0037
ARG 4340.0025
GLY 4350.0029
ALA 4360.0041
PHE 4370.0059
VAL 4380.0052
ARG 4390.0077
THR 4400.0083
ALA 4410.0149
GLY 4420.0189
GLN 4430.0437
ALA 4440.0262
LEU 4450.0088
PRO 4460.0064
ASP 4470.0056
LEU 4480.0054
GLN 4490.0035
VAL 4500.0031
ARG 4510.0025
PHE 4520.0035
VAL 4530.0038
PRO 4540.0037
GLY 4550.0075
MET 4560.0073
ALA 4570.0070
LEU 4580.0061
ASP 4590.0059
PRO 4600.0064
ASP 4610.0054
GLY 4620.0045
VAL 4630.0038
SER 4640.0054
THR 4650.0057
TYR 4660.0040
VAL 4670.0041
ARG 4680.0059
PHE 4690.0056
ALA 4700.0056
LYS 4710.0093
PHE 4720.0116
GLN 4730.0137
SER 4740.0211
GLN 4750.0269
GLY 4760.0218
LEU 4770.0209
LYS 4780.0196
TRP 4790.0100
PRO 4800.0115
SER 4810.0111
GLY 4820.0047
ILE 4830.0046
THR 4840.0048
MET 4850.0027
GLN 4860.0022
LEU 4870.0024
ILE 4880.0023
ALA 4890.0028
CYS 4900.0034
ARG 4910.0036
PRO 4920.0019
GLN 4930.0022
SER 4940.0046
THR 4950.0059
GLY 4960.0066
SER 4970.0070
VAL 4980.0064
GLY 4990.0060
LEU 5000.0038
LYS 5010.0049
SER 5020.0034
ALA 5030.0061
ASP 5040.0051
PRO 5050.0073
PHE 5060.0093
ALA 5070.0075
PRO 5080.0072
PRO 5090.0061
LYS 5100.0082
LEU 5110.0084
SER 5120.0106
PRO 5130.0086
GLY 5140.0094
TYR 5150.0049
LEU 5160.0041
THR 5170.0068
ASP 5180.0049
LYS 5190.0127
ASP 5200.0155
GLY 5210.0068
ALA 5220.0063
ASP 5230.0033
LEU 5240.0058
ALA 5250.0073
THR 5260.0070
LEU 5270.0040
ARG 5280.0061
LYS 5290.0071
GLY 5300.0032
ILE 5310.0022
HISE 5320.0038
TRP 5330.0063
ALA 5340.0049
ARG 5350.0048
ASP 5360.0093
VAL 5370.0080
ALA 5380.0069
ARG 5390.0101
SER 5400.0126
SER 5410.0142
ALA 5420.0132
LEU 5430.0094
SER 5440.0103
GLU 5450.0113
TYR 5460.0080
LEU 5470.0056
ASP 5480.0045
GLY 5490.0049
GLU 5500.0054
LEU 5510.0035
PHE 5520.0028
PRO 5530.0025
GLY 5540.0113
SER 5550.0264
GLY 5560.0281
VAL 5570.0107
VAL 5580.0167
SER 5590.0054
ASP 5600.0088
ASP 5610.0140
GLN 5620.0090
ILE 5630.0048
ASP 5640.0069
GLU 5650.0071
TYR 5660.0046
ILE 5670.0037
ARG 5680.0042
ARG 5690.0060
SER 5700.0046
ILE 5710.0040
HISD 5720.0032
SER 5730.0027
SER 5740.0018
ASN 5750.0031
ALA 5760.0035
ILE 5770.0048
THR 5780.0031
GLY 5790.0026
THR 5800.0030
CYS 5810.0005
LYS 5820.0020
MET 5830.0035
GLY 5840.0087
ASN 5850.0159
ALA 5860.0240
GLY 5870.0303
ASP 5880.0210
SER 5890.0120
SER 5900.0090
SER 5910.0061
VAL 5920.0034
VAL 5930.0039
ASP 5940.0061
ASN 5950.0060
GLN 5960.0038
LEU 5970.0031
ARG 5980.0038
VAL 5990.0041
HISE 6000.0057
GLY 6010.0074
VAL 6020.0041
GLU 6030.0065
GLY 6040.0074
LEU 6050.0035
ARG 6060.0032
VAL 6070.0030
VAL 6080.0023
ASP 6090.0026
ALA 6100.0026
SER 6110.0017
VAL 6120.0002
VAL 6130.0015
PRO 6140.0040
LYS 6150.0043
ILE 6160.0038
PRO 6170.0042
GLY 6180.0042
GLY 6190.0042
GLN 6200.0016
THR 6210.0021
GLY 6220.0032
ALA 6230.0032
PRO 6240.0033
VAL 6250.0026
VAL 6260.0036
MET 6270.0037
ILE 6280.0030
ALA 6290.0033
GLU 6300.0036
ARG 6310.0046
ALA 6320.0030
ALA 6330.0026
ALA 6340.0033
LEU 6350.0026
LEU 6360.0018
THR 6370.0028
GLY 6380.0049
LYS 6390.0065
ALA 6400.0059
THR 6410.0067
ILE 6420.0064
GLY 6430.0071
ALA 6440.0221
SER 6450.0273
ALA 6460.0247
ALA 6470.0296
ALA 6480.0103
PRO 6490.0333

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.