CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 43  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0422
SER 770.0116
PRO 780.0111
VAL 790.0100
ALA 800.0114
GLY 810.0112
GLN 820.0099
LYS 830.0082
TYR 840.0073
ASP 850.0062
TYR 860.0040
ILE 870.0057
LEU 880.0057
VAL 890.0036
GLY 900.0042
GLY 910.0055
GLY 920.0038
THR 930.0036
ALA 940.0024
ALA 950.0040
CYS 960.0045
VAL 970.0044
LEU 980.0031
ALA 990.0032
ASN 1000.0046
ARG 1010.0028
LEU 1020.0017
SER 1030.0015
ALA 1040.0054
ASP 1050.0084
GLY 1060.0099
SER 1070.0051
LYS 1080.0029
ARG 1090.0038
VAL 1100.0049
LEU 1110.0068
VAL 1120.0073
LEU 1130.0079
GLU 1140.0071
ALA 1150.0074
GLY 1160.0105
PRO 1170.0119
ASP 1180.0131
ASN 1190.0144
THR 1200.0194
SER 1210.0196
ARG 1220.0178
ASP 1230.0154
VAL 1240.0104
LYS 1250.0121
ILE 1260.0082
PRO 1270.0039
ALA 1280.0052
ALA 1290.0052
ILE 1300.0049
THR 1310.0068
ARG 1320.0051
LEU 1330.0073
PHE 1340.0097
ARG 1350.0105
SER 1360.0112
PRO 1370.0160
LEU 1380.0124
ASP 1390.0117
TRP 1400.0098
ASN 1410.0109
LEU 1420.0107
PHE 1430.0099
SER 1440.0095
GLU 1450.0091
LEU 1460.0123
GLN 1470.0139
GLU 1480.0245
GLN 1490.0147
LEU 1500.0088
ALA 1510.0137
GLU 1520.0222
ARG 1530.0115
GLN 1540.0046
ILE 1550.0072
TYR 1560.0086
MET 1570.0093
ALA 1580.0090
ARG 1590.0087
GLY 1600.0092
ARG 1610.0098
LEU 1620.0091
LEU 1630.0082
GLY 1640.0073
GLY 1650.0062
SER 1660.0060
SER 1670.0053
ALA 1680.0073
THR 1690.0078
ASN 1700.0039
ALA 1710.0037
THR 1720.0032
LEU 1730.0008
TYR 1740.0010
HISD 1750.0012
ARG 1760.0028
GLY 1770.0038
ALA 1780.0040
ALA 1790.0072
GLY 1800.0078
ASP 1810.0072
TYR 1820.0088
ASP 1830.0121
ALA 1840.0127
TRP 1850.0130
GLY 1860.0156
VAL 1870.0141
GLU 1880.0145
GLY 1890.0106
TRP 1900.0101
SER 1910.0103
SER 1920.0093
GLU 1930.0102
ASP 1940.0058
VAL 1950.0049
LEU 1960.0059
SER 1970.0059
TRP 1980.0043
PHE 1990.0032
VAL 2000.0038
GLN 2010.0063
ALA 2020.0056
GLU 2030.0047
THR 2040.0092
ASN 2050.0116
ALA 2060.0240
ASP 2070.0274
PHE 2080.0258
GLY 2090.0233
PRO 2100.0153
GLY 2110.0191
ALA 2120.0200
TYR 2130.0148
HISH 2140.0124
GLY 2150.0048
SER 2160.0062
GLY 2170.0121
GLY 2180.0073
PRO 2190.0069
MET 2200.0061
ARG 2210.0045
VAL 2220.0026
GLU 2230.0018
ASN 2240.0010
PRO 2250.0017
ARG 2260.0015
TYR 2270.0046
THR 2280.0053
ASN 2290.0053
LYS 2300.0169
GLN 2310.0109
LEU 2320.0045
HISE 2330.0073
THR 2340.0099
ALA 2350.0066
PHE 2360.0078
PHE 2370.0090
LYS 2380.0088
ALA 2390.0077
ALA 2400.0092
GLU 2410.0103
GLU 2420.0085
VAL 2430.0087
GLY 2440.0093
LEU 2450.0074
THR 2460.0060
PRO 2470.0064
ASN 2480.0077
SER 2490.0109
ASP 2500.0088
PHE 2510.0045
ASN 2520.0067
ASP 2530.0104
TRP 2540.0087
SER 2550.0150
HISE 2560.0162
ASP 2570.0101
HISE 2580.0065
ALA 2590.0043
GLY 2600.0054
TYR 2610.0065
GLY 2620.0066
THR 2630.0039
PHE 2640.0029
GLN 2650.0028
VAL 2660.0013
MET 2670.0031
GLN 2680.0044
ASP 2690.0076
LYS 2700.0087
GLY 2710.0064
THR 2720.0093
ARG 2730.0076
ALA 2740.0072
ASP 2750.0080
MET 2760.0071
TYR 2770.0085
ARG 2780.0091
GLN 2790.0087
TYR 2800.0072
LEU 2810.0082
LYS 2820.0110
PRO 2830.0126
VAL 2840.0043
LEU 2850.0044
GLY 2860.0042
ARG 2870.0145
ARG 2880.0205
ASN 2890.0104
LEU 2900.0063
GLN 2910.0082
VAL 2920.0083
LEU 2930.0091
THR 2940.0091
GLY 2950.0107
ALA 2960.0113
ALA 2970.0093
VAL 2980.0060
THR 2990.0074
LYS 3000.0068
VAL 3010.0058
ASN 3020.0078
ILE 3030.0078
ASP 3040.0085
GLN 3050.0141
ALA 3060.0141
ALA 3070.0204
GLY 3080.0148
LYS 3090.0090
ALA 3100.0089
GLN 3110.0074
ALA 3120.0064
LEU 3130.0059
GLY 3140.0057
VAL 3150.0061
GLU 3160.0057
PHE 3170.0085
SER 3180.0111
THR 3190.0159
ASP 3200.0236
GLY 3210.0207
PRO 3220.0164
THR 3230.0135
GLY 3240.0101
GLU 3250.0187
ARG 3260.0051
LEU 3270.0076
SER 3280.0062
ALA 3290.0086
GLU 3300.0075
LEU 3310.0065
ALA 3320.0088
PRO 3330.0109
GLY 3340.0103
GLY 3350.0045
GLU 3360.0039
VAL 3370.0041
ILE 3380.0020
MET 3390.0020
CYS 3400.0021
ALA 3410.0034
GLY 3420.0042
ALA 3430.0051
VAL 3440.0066
HISD 3450.0054
THR 3460.0047
PRO 3470.0029
PHE 3480.0030
LEU 3490.0039
LEU 3500.0054
LYS 3510.0047
HISE 3520.0059
SER 3530.0069
GLY 3540.0067
VAL 3550.0064
GLY 3560.0061
PRO 3570.0045
SER 3580.0052
ALA 3590.0044
GLU 3600.0038
LEU 3610.0058
LYS 3620.0072
GLU 3630.0065
PHE 3640.0066
GLY 3650.0085
ILE 3660.0083
PRO 3670.0088
VAL 3680.0085
VAL 3690.0086
SER 3700.0065
ASN 3710.0059
LEU 3720.0063
ALA 3730.0071
GLY 3740.0066
VAL 3750.0061
GLY 3760.0063
GLN 3770.0083
ASN 3780.0079
LEU 3790.0079
GLN 3800.0079
ASP 3810.0064
GLN 3820.0036
PRO 3830.0041
ALA 3840.0058
CYS 3850.0064
LEU 3860.0086
THR 3870.0081
ALA 3880.0078
ALA 3890.0054
PRO 3900.0020
VAL 3910.0031
LYS 3920.0092
GLU 3930.0221
LYS 3940.0249
TYR 3950.0122
ASP 3960.0118
GLY 3970.0082
ILE 3980.0049
ALA 3990.0037
ILE 4000.0047
SER 4010.0050
ASP 4020.0056
HISE 4030.0071
ILE 4040.0071
TYR 4050.0068
ASN 4060.0072
GLU 4070.0094
LYS 4080.0085
GLY 4090.0078
GLN 4100.0066
ILE 4110.0073
ARG 4120.0075
LYS 4130.0057
ARG 4140.0117
ALA 4150.0133
ILE 4160.0073
ALA 4170.0074
SER 4180.0108
TYR 4190.0076
LEU 4200.0111
LEU 4210.0142
GLY 4220.0093
GLY 4230.0065
ARG 4240.0059
GLY 4250.0046
GLY 4260.0049
LEU 4270.0047
THR 4280.0017
SER 4290.0017
THR 4300.0026
GLY 4310.0036
CYS 4320.0038
ASP 4330.0038
ARG 4340.0058
GLY 4350.0056
ALA 4360.0053
PHE 4370.0034
VAL 4380.0046
ARG 4390.0064
THR 4400.0077
ALA 4410.0101
GLY 4420.0094
GLN 4430.0182
ALA 4440.0134
LEU 4450.0073
PRO 4460.0029
ASP 4470.0034
LEU 4480.0041
GLN 4490.0035
VAL 4500.0050
ARG 4510.0056
PHE 4520.0060
VAL 4530.0053
PRO 4540.0038
GLY 4550.0035
MET 4560.0048
ALA 4570.0079
LEU 4580.0095
ASP 4590.0091
PRO 4600.0085
ASP 4610.0069
GLY 4620.0088
VAL 4630.0093
SER 4640.0082
THR 4650.0082
TYR 4660.0091
VAL 4670.0096
ARG 4680.0093
PHE 4690.0089
ALA 4700.0121
LYS 4710.0133
PHE 4720.0121
GLN 4730.0128
SER 4740.0183
GLN 4750.0173
GLY 4760.0123
LEU 4770.0099
LYS 4780.0071
TRP 4790.0054
PRO 4800.0049
SER 4810.0026
GLY 4820.0015
ILE 4830.0031
THR 4840.0061
MET 4850.0078
GLN 4860.0072
LEU 4870.0065
ILE 4880.0034
ALA 4890.0018
CYS 4900.0005
ARG 4910.0053
PRO 4920.0052
GLN 4930.0076
SER 4940.0106
THR 4950.0098
GLY 4960.0091
SER 4970.0082
VAL 4980.0073
GLY 4990.0060
LEU 5000.0010
LYS 5010.0018
SER 5020.0041
ALA 5030.0079
ASP 5040.0076
PRO 5050.0086
PHE 5060.0056
ALA 5070.0035
PRO 5080.0029
PRO 5090.0062
LYS 5100.0070
LEU 5110.0089
SER 5120.0111
PRO 5130.0115
GLY 5140.0115
TYR 5150.0075
LEU 5160.0073
THR 5170.0117
ASP 5180.0234
LYS 5190.0225
ASP 5200.0207
GLY 5210.0115
ALA 5220.0074
ASP 5230.0041
LEU 5240.0053
ALA 5250.0069
THR 5260.0059
LEU 5270.0072
ARG 5280.0081
LYS 5290.0111
GLY 5300.0097
ILE 5310.0095
HISE 5320.0109
TRP 5330.0085
ALA 5340.0083
ARG 5350.0085
ASP 5360.0073
VAL 5370.0070
ALA 5380.0068
ARG 5390.0059
SER 5400.0042
SER 5410.0023
ALA 5420.0016
LEU 5430.0026
SER 5440.0053
GLU 5450.0081
TYR 5460.0048
LEU 5470.0049
ASP 5480.0061
GLY 5490.0086
GLU 5500.0087
LEU 5510.0093
PHE 5520.0091
PRO 5530.0099
GLY 5540.0208
SER 5550.0362
GLY 5560.0377
VAL 5570.0194
VAL 5580.0227
SER 5590.0306
ASP 5600.0274
ASP 5610.0300
GLN 5620.0213
ILE 5630.0096
ASP 5640.0116
GLU 5650.0069
TYR 5660.0071
ILE 5670.0072
ARG 5680.0059
ARG 5690.0053
SER 5700.0067
ILE 5710.0058
HISD 5720.0054
SER 5730.0067
SER 5740.0066
ASN 5750.0059
ALA 5760.0063
ILE 5770.0076
THR 5780.0065
GLY 5790.0066
THR 5800.0070
CYS 5810.0077
LYS 5820.0082
MET 5830.0090
GLY 5840.0141
ASN 5850.0210
ALA 5860.0273
GLY 5870.0335
ASP 5880.0223
SER 5890.0153
SER 5900.0103
SER 5910.0094
VAL 5920.0086
VAL 5930.0080
ASP 5940.0091
ASN 5950.0084
GLN 5960.0053
LEU 5970.0046
ARG 5980.0050
VAL 5990.0057
HISE 6000.0053
GLY 6010.0050
VAL 6020.0055
GLU 6030.0045
GLY 6040.0040
LEU 6050.0033
ARG 6060.0026
VAL 6070.0036
VAL 6080.0013
ASP 6090.0023
ALA 6100.0033
SER 6110.0055
VAL 6120.0057
VAL 6130.0055
PRO 6140.0090
LYS 6150.0075
ILE 6160.0052
PRO 6170.0037
GLY 6180.0030
GLY 6190.0021
GLN 6200.0013
THR 6210.0017
GLY 6220.0020
ALA 6230.0011
PRO 6240.0009
VAL 6250.0006
VAL 6260.0022
MET 6270.0029
ILE 6280.0017
ALA 6290.0013
GLU 6300.0027
ARG 6310.0024
ALA 6320.0015
ALA 6330.0031
ALA 6340.0067
LEU 6350.0061
LEU 6360.0074
THR 6370.0114
GLY 6380.0422
LYS 6390.0382
ALA 6400.0175
THR 6410.0085
ILE 6420.0071
GLY 6430.0103
ALA 6440.0045
SER 6450.0067
ALA 6460.0079
ALA 6470.0069
ALA 6480.0043
PRO 6490.0100

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.