CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0575
SER 770.0040
PRO 780.0037
VAL 790.0032
ALA 800.0088
GLY 810.0092
GLN 820.0087
LYS 830.0101
TYR 840.0071
ASP 850.0071
TYR 860.0026
ILE 870.0024
LEU 880.0016
VAL 890.0039
GLY 900.0039
GLY 910.0045
GLY 920.0046
THR 930.0042
ALA 940.0046
ALA 950.0038
CYS 960.0033
VAL 970.0037
LEU 980.0025
ALA 990.0028
ASN 1000.0027
ARG 1010.0036
LEU 1020.0030
SER 1030.0034
ALA 1040.0060
ASP 1050.0099
GLY 1060.0122
SER 1070.0107
LYS 1080.0091
ARG 1090.0087
VAL 1100.0027
LEU 1110.0032
VAL 1120.0038
LEU 1130.0060
GLU 1140.0085
ALA 1150.0110
GLY 1160.0141
PRO 1170.0148
ASP 1180.0139
ASN 1190.0134
THR 1200.0169
SER 1210.0158
ARG 1220.0125
ASP 1230.0104
VAL 1240.0090
LYS 1250.0091
ILE 1260.0067
PRO 1270.0053
ALA 1280.0059
ALA 1290.0059
ILE 1300.0065
THR 1310.0073
ARG 1320.0064
LEU 1330.0064
PHE 1340.0053
ARG 1350.0057
SER 1360.0069
PRO 1370.0126
LEU 1380.0108
ASP 1390.0096
TRP 1400.0071
ASN 1410.0061
LEU 1420.0071
PHE 1430.0054
SER 1440.0051
GLU 1450.0064
LEU 1460.0064
GLN 1470.0057
GLU 1480.0101
GLN 1490.0069
LEU 1500.0034
ALA 1510.0040
GLU 1520.0085
ARG 1530.0048
GLN 1540.0025
ILE 1550.0041
TYR 1560.0036
MET 1570.0037
ALA 1580.0043
ARG 1590.0049
GLY 1600.0057
ARG 1610.0106
LEU 1620.0101
LEU 1630.0090
GLY 1640.0069
GLY 1650.0072
SER 1660.0067
SER 1670.0059
ALA 1680.0067
THR 1690.0067
ASN 1700.0068
ALA 1710.0070
THR 1720.0074
LEU 1730.0076
TYR 1740.0072
HISD 1750.0071
ARG 1760.0093
GLY 1770.0098
ALA 1780.0097
ALA 1790.0117
GLY 1800.0107
ASP 1810.0082
TYR 1820.0092
ASP 1830.0118
ALA 1840.0107
TRP 1850.0082
GLY 1860.0125
VAL 1870.0119
GLU 1880.0163
GLY 1890.0134
TRP 1900.0096
SER 1910.0114
SER 1920.0118
GLU 1930.0135
ASP 1940.0091
VAL 1950.0073
LEU 1960.0089
SER 1970.0081
TRP 1980.0076
PHE 1990.0080
VAL 2000.0081
GLN 2010.0094
ALA 2020.0086
GLU 2030.0071
THR 2040.0042
ASN 2050.0045
ALA 2060.0073
ASP 2070.0123
PHE 2080.0147
GLY 2090.0164
PRO 2100.0181
GLY 2110.0221
ALA 2120.0172
TYR 2130.0105
HISH 2140.0078
GLY 2150.0079
SER 2160.0116
GLY 2170.0080
GLY 2180.0074
PRO 2190.0068
MET 2200.0065
ARG 2210.0088
VAL 2220.0087
GLU 2230.0096
ASN 2240.0091
PRO 2250.0079
ARG 2260.0082
TYR 2270.0043
THR 2280.0053
ASN 2290.0049
LYS 2300.0061
GLN 2310.0054
LEU 2320.0034
HISE 2330.0037
THR 2340.0038
ALA 2350.0039
PHE 2360.0045
PHE 2370.0035
LYS 2380.0040
ALA 2390.0055
ALA 2400.0052
GLU 2410.0047
GLU 2420.0060
VAL 2430.0076
GLY 2440.0075
LEU 2450.0067
THR 2460.0049
PRO 2470.0029
ASN 2480.0055
SER 2490.0057
ASP 2500.0050
PHE 2510.0048
ASN 2520.0061
ASP 2530.0067
TRP 2540.0083
SER 2550.0078
HISE 2560.0087
ASP 2570.0087
HISE 2580.0062
ALA 2590.0031
GLY 2600.0028
TYR 2610.0026
GLY 2620.0034
THR 2630.0063
PHE 2640.0058
GLN 2650.0060
VAL 2660.0083
MET 2670.0081
GLN 2680.0088
ASP 2690.0127
LYS 2700.0160
GLY 2710.0095
THR 2720.0103
ARG 2730.0082
ALA 2740.0087
ASP 2750.0062
MET 2760.0060
TYR 2770.0071
ARG 2780.0090
GLN 2790.0078
TYR 2800.0065
LEU 2810.0059
LYS 2820.0100
PRO 2830.0124
VAL 2840.0063
LEU 2850.0081
GLY 2860.0093
ARG 2870.0121
ARG 2880.0164
ASN 2890.0101
LEU 2900.0041
GLN 2910.0044
VAL 2920.0056
LEU 2930.0068
THR 2940.0094
GLY 2950.0120
ALA 2960.0082
ALA 2970.0086
VAL 2980.0081
THR 2990.0089
LYS 3000.0064
VAL 3010.0040
ASN 3020.0037
ILE 3030.0033
ASP 3040.0099
GLN 3050.0218
ALA 3060.0360
ALA 3070.0575
GLY 3080.0354
LYS 3090.0205
ALA 3100.0143
GLN 3110.0141
ALA 3120.0067
LEU 3130.0056
GLY 3140.0038
VAL 3150.0037
GLU 3160.0044
PHE 3170.0058
SER 3180.0082
THR 3190.0142
ASP 3200.0379
GLY 3210.0333
PRO 3220.0259
THR 3230.0186
GLY 3240.0183
GLU 3250.0354
ARG 3260.0041
LEU 3270.0039
SER 3280.0044
ALA 3290.0048
GLU 3300.0063
LEU 3310.0061
ALA 3320.0132
PRO 3330.0248
GLY 3340.0209
GLY 3350.0045
GLU 3360.0034
VAL 3370.0027
ILE 3380.0025
MET 3390.0025
CYS 3400.0023
ALA 3410.0028
GLY 3420.0015
ALA 3430.0019
VAL 3440.0024
HISD 3450.0041
THR 3460.0031
PRO 3470.0047
PHE 3480.0053
LEU 3490.0062
LEU 3500.0077
LYS 3510.0074
HISE 3520.0083
SER 3530.0074
GLY 3540.0071
VAL 3550.0075
GLY 3560.0105
PRO 3570.0110
SER 3580.0118
ALA 3590.0120
GLU 3600.0107
LEU 3610.0111
LYS 3620.0144
GLU 3630.0150
PHE 3640.0151
GLY 3650.0110
ILE 3660.0107
PRO 3670.0107
VAL 3680.0052
VAL 3690.0043
SER 3700.0066
ASN 3710.0122
LEU 3720.0130
ALA 3730.0150
GLY 3740.0092
VAL 3750.0086
GLY 3760.0081
GLN 3770.0054
ASN 3780.0039
LEU 3790.0050
GLN 3800.0057
ASP 3810.0064
GLN 3820.0064
PRO 3830.0049
ALA 3840.0043
CYS 3850.0037
LEU 3860.0045
THR 3870.0053
ALA 3880.0057
ALA 3890.0039
PRO 3900.0051
VAL 3910.0059
LYS 3920.0134
GLU 3930.0193
LYS 3940.0207
TYR 3950.0120
ASP 3960.0133
GLY 3970.0124
ILE 3980.0037
ALA 3990.0032
ILE 4000.0040
SER 4010.0052
ASP 4020.0051
HISE 4030.0054
ILE 4040.0055
TYR 4050.0060
ASN 4060.0063
GLU 4070.0081
LYS 4080.0079
GLY 4090.0075
GLN 4100.0050
ILE 4110.0050
ARG 4120.0046
LYS 4130.0096
ARG 4140.0114
ALA 4150.0091
ILE 4160.0060
ALA 4170.0102
SER 4180.0119
TYR 4190.0058
LEU 4200.0161
LEU 4210.0227
GLY 4220.0088
GLY 4230.0024
ARG 4240.0044
GLY 4250.0031
GLY 4260.0038
LEU 4270.0027
THR 4280.0054
SER 4290.0051
THR 4300.0049
GLY 4310.0045
CYS 4320.0045
ASP 4330.0057
ARG 4340.0048
GLY 4350.0035
ALA 4360.0024
PHE 4370.0021
VAL 4380.0069
ARG 4390.0106
THR 4400.0149
ALA 4410.0179
GLY 4420.0179
GLN 4430.0287
ALA 4440.0193
LEU 4450.0076
PRO 4460.0054
ASP 4470.0061
LEU 4480.0037
GLN 4490.0025
VAL 4500.0036
ARG 4510.0039
PHE 4520.0026
VAL 4530.0027
PRO 4540.0024
GLY 4550.0043
MET 4560.0035
ALA 4570.0034
LEU 4580.0024
ASP 4590.0027
PRO 4600.0024
ASP 4610.0023
GLY 4620.0023
VAL 4630.0029
SER 4640.0032
THR 4650.0040
TYR 4660.0050
VAL 4670.0063
ARG 4680.0058
PHE 4690.0072
ALA 4700.0096
LYS 4710.0094
PHE 4720.0090
GLN 4730.0105
SER 4740.0122
GLN 4750.0112
GLY 4760.0094
LEU 4770.0068
LYS 4780.0054
TRP 4790.0038
PRO 4800.0025
SER 4810.0050
GLY 4820.0040
ILE 4830.0034
THR 4840.0035
MET 4850.0049
GLN 4860.0042
LEU 4870.0042
ILE 4880.0034
ALA 4890.0030
CYS 4900.0034
ARG 4910.0051
PRO 4920.0054
GLN 4930.0055
SER 4940.0081
THR 4950.0076
GLY 4960.0070
SER 4970.0056
VAL 4980.0048
GLY 4990.0063
LEU 5000.0079
LYS 5010.0108
SER 5020.0137
ALA 5030.0173
ASP 5040.0131
PRO 5050.0138
PHE 5060.0122
ALA 5070.0107
PRO 5080.0084
PRO 5090.0073
LYS 5100.0070
LEU 5110.0050
SER 5120.0057
PRO 5130.0063
GLY 5140.0087
TYR 5150.0075
LEU 5160.0057
THR 5170.0079
ASP 5180.0121
LYS 5190.0283
ASP 5200.0369
GLY 5210.0127
ALA 5220.0105
ASP 5230.0041
LEU 5240.0058
ALA 5250.0075
THR 5260.0070
LEU 5270.0056
ARG 5280.0064
LYS 5290.0091
GLY 5300.0078
ILE 5310.0079
HISE 5320.0088
TRP 5330.0094
ALA 5340.0093
ARG 5350.0100
ASP 5360.0082
VAL 5370.0074
ALA 5380.0075
ARG 5390.0064
SER 5400.0052
SER 5410.0038
ALA 5420.0036
LEU 5430.0036
SER 5440.0028
GLU 5450.0037
TYR 5460.0026
LEU 5470.0035
ASP 5480.0052
GLY 5490.0069
GLU 5500.0091
LEU 5510.0079
PHE 5520.0067
PRO 5530.0080
GLY 5540.0233
SER 5550.0383
GLY 5560.0312
VAL 5570.0106
VAL 5580.0138
SER 5590.0260
ASP 5600.0202
ASP 5610.0208
GLN 5620.0150
ILE 5630.0021
ASP 5640.0030
GLU 5650.0039
TYR 5660.0042
ILE 5670.0046
ARG 5680.0050
ARG 5690.0027
SER 5700.0034
ILE 5710.0038
HISD 5720.0042
SER 5730.0049
SER 5740.0052
ASN 5750.0055
ALA 5760.0050
ILE 5770.0047
THR 5780.0043
GLY 5790.0027
THR 5800.0042
CYS 5810.0062
LYS 5820.0049
MET 5830.0055
GLY 5840.0115
ASN 5850.0215
ALA 5860.0316
GLY 5870.0330
ASP 5880.0241
SER 5890.0257
SER 5900.0141
SER 5910.0111
VAL 5920.0107
VAL 5930.0089
ASP 5940.0097
ASN 5950.0085
GLN 5960.0059
LEU 5970.0055
ARG 5980.0075
VAL 5990.0097
HISE 6000.0105
GLY 6010.0076
VAL 6020.0073
GLU 6030.0113
GLY 6040.0104
LEU 6050.0057
ARG 6060.0056
VAL 6070.0053
VAL 6080.0020
ASP 6090.0026
ALA 6100.0031
SER 6110.0042
VAL 6120.0029
VAL 6130.0026
PRO 6140.0024
LYS 6150.0039
ILE 6160.0054
PRO 6170.0071
GLY 6180.0068
GLY 6190.0076
GLN 6200.0071
THR 6210.0071
GLY 6220.0076
ALA 6230.0083
PRO 6240.0075
VAL 6250.0063
VAL 6260.0066
MET 6270.0064
ILE 6280.0051
ALA 6290.0052
GLU 6300.0052
ARG 6310.0048
ALA 6320.0027
ALA 6330.0031
ALA 6340.0033
LEU 6350.0030
LEU 6360.0048
THR 6370.0058
GLY 6380.0170
LYS 6390.0129
ALA 6400.0054
THR 6410.0080
ILE 6420.0092
GLY 6430.0113
ALA 6440.0055
SER 6450.0044
ALA 6460.0074
ALA 6470.0059
ALA 6480.0034
PRO 6490.0096

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.