CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 49  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0653
SER 770.0292
PRO 780.0220
VAL 790.0117
ALA 800.0193
GLY 810.0204
GLN 820.0128
LYS 830.0080
TYR 840.0019
ASP 850.0061
TYR 860.0049
ILE 870.0057
LEU 880.0069
VAL 890.0078
GLY 900.0076
GLY 910.0065
GLY 920.0020
THR 930.0017
ALA 940.0011
ALA 950.0013
CYS 960.0011
VAL 970.0024
LEU 980.0010
ALA 990.0011
ASN 1000.0016
ARG 1010.0011
LEU 1020.0020
SER 1030.0018
ALA 1040.0020
ASP 1050.0024
GLY 1060.0029
SER 1070.0024
LYS 1080.0025
ARG 1090.0022
VAL 1100.0048
LEU 1110.0062
VAL 1120.0077
LEU 1130.0092
GLU 1140.0087
ALA 1150.0090
GLY 1160.0056
PRO 1170.0052
ASP 1180.0037
ASN 1190.0016
THR 1200.0030
SER 1210.0040
ARG 1220.0033
ASP 1230.0044
VAL 1240.0029
LYS 1250.0022
ILE 1260.0034
PRO 1270.0035
ALA 1280.0054
ALA 1290.0046
ILE 1300.0056
THR 1310.0073
ARG 1320.0067
LEU 1330.0072
PHE 1340.0085
ARG 1350.0104
SER 1360.0096
PRO 1370.0090
LEU 1380.0052
ASP 1390.0044
TRP 1400.0047
ASN 1410.0053
LEU 1420.0035
PHE 1430.0034
SER 1440.0034
GLU 1450.0039
LEU 1460.0066
GLN 1470.0050
GLU 1480.0090
GLN 1490.0042
LEU 1500.0024
ALA 1510.0047
GLU 1520.0093
ARG 1530.0058
GLN 1540.0032
ILE 1550.0047
TYR 1560.0050
MET 1570.0034
ALA 1580.0031
ARG 1590.0014
GLY 1600.0017
ARG 1610.0028
LEU 1620.0028
LEU 1630.0031
GLY 1640.0014
GLY 1650.0015
SER 1660.0015
SER 1670.0026
ALA 1680.0021
THR 1690.0022
ASN 1700.0022
ALA 1710.0026
THR 1720.0041
LEU 1730.0082
TYR 1740.0078
HISD 1750.0072
ARG 1760.0138
GLY 1770.0146
ALA 1780.0140
ALA 1790.0163
GLY 1800.0153
ASP 1810.0142
TYR 1820.0140
ASP 1830.0146
ALA 1840.0141
TRP 1850.0092
GLY 1860.0096
VAL 1870.0075
GLU 1880.0105
GLY 1890.0112
TRP 1900.0109
SER 1910.0136
SER 1920.0166
GLU 1930.0166
ASP 1940.0126
VAL 1950.0128
LEU 1960.0140
SER 1970.0130
TRP 1980.0123
PHE 1990.0135
VAL 2000.0118
GLN 2010.0140
ALA 2020.0136
GLU 2030.0114
THR 2040.0098
ASN 2050.0076
ALA 2060.0220
ASP 2070.0285
PHE 2080.0248
GLY 2090.0194
PRO 2100.0148
GLY 2110.0292
ALA 2120.0316
TYR 2130.0201
HISH 2140.0094
GLY 2150.0070
SER 2160.0105
GLY 2170.0124
GLY 2180.0111
PRO 2190.0118
MET 2200.0106
ARG 2210.0110
VAL 2220.0087
GLU 2230.0091
ASN 2240.0074
PRO 2250.0057
ARG 2260.0070
TYR 2270.0046
THR 2280.0037
ASN 2290.0054
LYS 2300.0007
GLN 2310.0011
LEU 2320.0045
HISE 2330.0046
THR 2340.0049
ALA 2350.0071
PHE 2360.0079
PHE 2370.0072
LYS 2380.0090
ALA 2390.0107
ALA 2400.0106
GLU 2410.0112
GLU 2420.0118
VAL 2430.0124
GLY 2440.0122
LEU 2450.0101
THR 2460.0088
PRO 2470.0076
ASN 2480.0055
SER 2490.0071
ASP 2500.0031
PHE 2510.0045
ASN 2520.0061
ASP 2530.0064
TRP 2540.0100
SER 2550.0117
HISE 2560.0079
ASP 2570.0053
HISE 2580.0057
ALA 2590.0051
GLY 2600.0062
TYR 2610.0070
GLY 2620.0054
THR 2630.0047
PHE 2640.0048
GLN 2650.0052
VAL 2660.0055
MET 2670.0066
GLN 2680.0076
ASP 2690.0084
LYS 2700.0105
GLY 2710.0084
THR 2720.0059
ARG 2730.0044
ALA 2740.0058
ASP 2750.0049
MET 2760.0043
TYR 2770.0036
ARG 2780.0071
GLN 2790.0069
TYR 2800.0071
LEU 2810.0035
LYS 2820.0020
PRO 2830.0027
VAL 2840.0016
LEU 2850.0022
GLY 2860.0024
ARG 2870.0062
ARG 2880.0080
ASN 2890.0048
LEU 2900.0051
GLN 2910.0065
VAL 2920.0082
LEU 2930.0101
THR 2940.0096
GLY 2950.0106
ALA 2960.0123
ALA 2970.0123
VAL 2980.0107
THR 2990.0089
LYS 3000.0089
VAL 3010.0094
ASN 3020.0103
ILE 3030.0103
ASP 3040.0103
GLN 3050.0225
ALA 3060.0331
ALA 3070.0628
GLY 3080.0514
LYS 3090.0242
ALA 3100.0135
GLN 3110.0103
ALA 3120.0053
LEU 3130.0039
GLY 3140.0069
VAL 3150.0083
GLU 3160.0084
PHE 3170.0103
SER 3180.0117
THR 3190.0152
ASP 3200.0121
GLY 3210.0076
PRO 3220.0066
THR 3230.0148
GLY 3240.0112
GLU 3250.0163
ARG 3260.0086
LEU 3270.0090
SER 3280.0073
ALA 3290.0045
GLU 3300.0015
LEU 3310.0021
ALA 3320.0105
PRO 3330.0209
GLY 3340.0226
GLY 3350.0057
GLU 3360.0065
VAL 3370.0069
ILE 3380.0064
MET 3390.0071
CYS 3400.0067
ALA 3410.0063
GLY 3420.0042
ALA 3430.0030
VAL 3440.0050
HISD 3450.0052
THR 3460.0061
PRO 3470.0064
PHE 3480.0042
LEU 3490.0064
LEU 3500.0064
LYS 3510.0034
HISE 3520.0029
SER 3530.0066
GLY 3540.0066
VAL 3550.0086
GLY 3560.0075
PRO 3570.0143
SER 3580.0231
ALA 3590.0339
GLU 3600.0256
LEU 3610.0180
LYS 3620.0310
GLU 3630.0356
PHE 3640.0275
GLY 3650.0197
ILE 3660.0108
PRO 3670.0151
VAL 3680.0087
VAL 3690.0143
SER 3700.0141
ASN 3710.0149
LEU 3720.0093
ALA 3730.0059
GLY 3740.0076
VAL 3750.0074
GLY 3760.0074
GLN 3770.0036
ASN 3780.0029
LEU 3790.0026
GLN 3800.0047
ASP 3810.0051
GLN 3820.0061
PRO 3830.0054
ALA 3840.0058
CYS 3850.0050
LEU 3860.0036
THR 3870.0031
ALA 3880.0036
ALA 3890.0053
PRO 3900.0047
VAL 3910.0055
LYS 3920.0072
GLU 3930.0159
LYS 3940.0175
TYR 3950.0127
ASP 3960.0161
GLY 3970.0175
ILE 3980.0094
ALA 3990.0101
ILE 4000.0119
SER 4010.0144
ASP 4020.0145
HISE 4030.0137
ILE 4040.0128
TYR 4050.0097
ASN 4060.0127
GLU 4070.0194
LYS 4080.0146
GLY 4090.0040
GLN 4100.0062
ILE 4110.0071
ARG 4120.0140
LYS 4130.0115
ARG 4140.0078
ALA 4150.0082
ILE 4160.0104
ALA 4170.0094
SER 4180.0072
TYR 4190.0069
LEU 4200.0067
LEU 4210.0073
GLY 4220.0124
GLY 4230.0085
ARG 4240.0087
GLY 4250.0082
GLY 4260.0090
LEU 4270.0071
THR 4280.0054
SER 4290.0058
THR 4300.0061
GLY 4310.0042
CYS 4320.0038
ASP 4330.0042
ARG 4340.0047
GLY 4350.0054
ALA 4360.0056
PHE 4370.0056
VAL 4380.0050
ARG 4390.0047
THR 4400.0034
ALA 4410.0057
GLY 4420.0080
GLN 4430.0120
ALA 4440.0114
LEU 4450.0098
PRO 4460.0064
ASP 4470.0053
LEU 4480.0053
GLN 4490.0033
VAL 4500.0040
ARG 4510.0049
PHE 4520.0064
VAL 4530.0068
PRO 4540.0058
GLY 4550.0090
MET 4560.0071
ALA 4570.0070
LEU 4580.0095
ASP 4590.0075
PRO 4600.0063
ASP 4610.0065
GLY 4620.0071
VAL 4630.0067
SER 4640.0102
THR 4650.0099
TYR 4660.0085
VAL 4670.0124
ARG 4680.0132
PHE 4690.0104
ALA 4700.0126
LYS 4710.0172
PHE 4720.0134
GLN 4730.0120
SER 4740.0230
GLN 4750.0261
GLY 4760.0145
LEU 4770.0119
LYS 4780.0126
TRP 4790.0108
PRO 4800.0121
SER 4810.0133
GLY 4820.0046
ILE 4830.0053
THR 4840.0058
MET 4850.0049
GLN 4860.0046
LEU 4870.0033
ILE 4880.0062
ALA 4890.0057
CYS 4900.0065
ARG 4910.0086
PRO 4920.0069
GLN 4930.0065
SER 4940.0056
THR 4950.0035
GLY 4960.0017
SER 4970.0025
VAL 4980.0034
GLY 4990.0029
LEU 5000.0107
LYS 5010.0161
SER 5020.0177
ALA 5030.0165
ASP 5040.0146
PRO 5050.0091
PHE 5060.0093
ALA 5070.0123
PRO 5080.0134
PRO 5090.0072
LYS 5100.0062
LEU 5110.0057
SER 5120.0040
PRO 5130.0042
GLY 5140.0044
TYR 5150.0052
LEU 5160.0045
THR 5170.0051
ASP 5180.0082
LYS 5190.0113
ASP 5200.0124
GLY 5210.0051
ALA 5220.0042
ASP 5230.0045
LEU 5240.0027
ALA 5250.0017
THR 5260.0025
LEU 5270.0028
ARG 5280.0020
LYS 5290.0015
GLY 5300.0028
ILE 5310.0034
HISE 5320.0035
TRP 5330.0057
ALA 5340.0062
ARG 5350.0059
ASP 5360.0096
VAL 5370.0088
ALA 5380.0084
ARG 5390.0087
SER 5400.0086
SER 5410.0084
ALA 5420.0067
LEU 5430.0068
SER 5440.0071
GLU 5450.0041
TYR 5460.0043
LEU 5470.0048
ASP 5480.0053
GLY 5490.0052
GLU 5500.0045
LEU 5510.0018
PHE 5520.0027
PRO 5530.0031
GLY 5540.0040
SER 5550.0081
GLY 5560.0103
VAL 5570.0042
VAL 5580.0087
SER 5590.0031
ASP 5600.0085
ASP 5610.0096
GLN 5620.0046
ILE 5630.0022
ASP 5640.0027
GLU 5650.0032
TYR 5660.0024
ILE 5670.0023
ARG 5680.0025
ARG 5690.0035
SER 5700.0046
ILE 5710.0046
HISD 5720.0049
SER 5730.0054
SER 5740.0065
ASN 5750.0045
ALA 5760.0042
ILE 5770.0029
THR 5780.0026
GLY 5790.0011
THR 5800.0036
CYS 5810.0069
LYS 5820.0057
MET 5830.0020
GLY 5840.0046
ASN 5850.0127
ALA 5860.0319
GLY 5870.0653
ASP 5880.0424
SER 5890.0266
SER 5900.0195
SER 5910.0121
VAL 5920.0078
VAL 5930.0046
ASP 5940.0026
ASN 5950.0034
GLN 5960.0021
LEU 5970.0018
ARG 5980.0040
VAL 5990.0072
HISE 6000.0077
GLY 6010.0082
VAL 6020.0091
GLU 6030.0055
GLY 6040.0030
LEU 6050.0068
ARG 6060.0057
VAL 6070.0059
VAL 6080.0025
ASP 6090.0031
ALA 6100.0022
SER 6110.0051
VAL 6120.0030
VAL 6130.0030
PRO 6140.0066
LYS 6150.0071
ILE 6160.0070
PRO 6170.0110
GLY 6180.0102
GLY 6190.0103
GLN 6200.0082
THR 6210.0084
GLY 6220.0086
ALA 6230.0107
PRO 6240.0096
VAL 6250.0079
VAL 6260.0080
MET 6270.0081
ILE 6280.0076
ALA 6290.0061
GLU 6300.0064
ARG 6310.0060
ALA 6320.0011
ALA 6330.0012
ALA 6340.0010
LEU 6350.0018
LEU 6360.0032
THR 6370.0042
GLY 6380.0122
LYS 6390.0085
ALA 6400.0045
THR 6410.0061
ILE 6420.0061
GLY 6430.0077
ALA 6440.0046
SER 6450.0054
ALA 6460.0053
ALA 6470.0066
ALA 6480.0056
PRO 6490.0069

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.