CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 51  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0329
SER 770.0097
PRO 780.0049
VAL 790.0038
ALA 800.0075
GLY 810.0103
GLN 820.0094
LYS 830.0071
TYR 840.0082
ASP 850.0100
TYR 860.0081
ILE 870.0061
LEU 880.0074
VAL 890.0047
GLY 900.0074
GLY 910.0091
GLY 920.0070
THR 930.0071
ALA 940.0060
ALA 950.0089
CYS 960.0093
VAL 970.0089
LEU 980.0101
ALA 990.0111
ASN 1000.0112
ARG 1010.0110
LEU 1020.0115
SER 1030.0124
ALA 1040.0161
ASP 1050.0165
GLY 1060.0163
SER 1070.0164
LYS 1080.0151
ARG 1090.0139
VAL 1100.0122
LEU 1110.0097
VAL 1120.0104
LEU 1130.0087
GLU 1140.0098
ALA 1150.0108
GLY 1160.0121
PRO 1170.0092
ASP 1180.0071
ASN 1190.0066
THR 1200.0037
SER 1210.0049
ARG 1220.0081
ASP 1230.0077
VAL 1240.0038
LYS 1250.0023
ILE 1260.0037
PRO 1270.0026
ALA 1280.0044
ALA 1290.0057
ILE 1300.0048
THR 1310.0055
ARG 1320.0088
LEU 1330.0078
PHE 1340.0070
ARG 1350.0085
SER 1360.0113
PRO 1370.0148
LEU 1380.0125
ASP 1390.0134
TRP 1400.0123
ASN 1410.0107
LEU 1420.0097
PHE 1430.0054
SER 1440.0060
GLU 1450.0073
LEU 1460.0149
GLN 1470.0133
GLU 1480.0226
GLN 1490.0099
LEU 1500.0045
ALA 1510.0037
GLU 1520.0197
ARG 1530.0102
GLN 1540.0024
ILE 1550.0046
TYR 1560.0061
MET 1570.0075
ALA 1580.0093
ARG 1590.0105
GLY 1600.0123
ARG 1610.0147
LEU 1620.0105
LEU 1630.0098
GLY 1640.0084
GLY 1650.0093
SER 1660.0095
SER 1670.0081
ALA 1680.0057
THR 1690.0067
ASN 1700.0048
ALA 1710.0037
THR 1720.0046
LEU 1730.0052
TYR 1740.0044
HISD 1750.0047
ARG 1760.0084
GLY 1770.0091
ALA 1780.0089
ALA 1790.0102
GLY 1800.0087
ASP 1810.0088
TYR 1820.0084
ASP 1830.0078
ALA 1840.0068
TRP 1850.0044
GLY 1860.0040
VAL 1870.0050
GLU 1880.0073
GLY 1890.0088
TRP 1900.0087
SER 1910.0108
SER 1920.0114
GLU 1930.0120
ASP 1940.0108
VAL 1950.0108
LEU 1960.0109
SER 1970.0080
TRP 1980.0081
PHE 1990.0077
VAL 2000.0070
GLN 2010.0061
ALA 2020.0059
GLU 2030.0052
THR 2040.0063
ASN 2050.0080
ALA 2060.0156
ASP 2070.0181
PHE 2080.0179
GLY 2090.0179
PRO 2100.0149
GLY 2110.0129
ALA 2120.0074
TYR 2130.0055
HISH 2140.0060
GLY 2150.0069
SER 2160.0095
GLY 2170.0085
GLY 2180.0034
PRO 2190.0039
MET 2200.0044
ARG 2210.0041
VAL 2220.0035
GLU 2230.0036
ASN 2240.0043
PRO 2250.0033
ARG 2260.0026
TYR 2270.0026
THR 2280.0035
ASN 2290.0053
LYS 2300.0068
GLN 2310.0067
LEU 2320.0060
HISE 2330.0050
THR 2340.0058
ALA 2350.0061
PHE 2360.0054
PHE 2370.0059
LYS 2380.0047
ALA 2390.0031
ALA 2400.0061
GLU 2410.0088
GLU 2420.0073
VAL 2430.0072
GLY 2440.0110
LEU 2450.0104
THR 2460.0137
PRO 2470.0153
ASN 2480.0136
SER 2490.0143
ASP 2500.0123
PHE 2510.0095
ASN 2520.0082
ASP 2530.0070
TRP 2540.0074
SER 2550.0047
HISE 2560.0070
ASP 2570.0131
HISE 2580.0123
ALA 2590.0117
GLY 2600.0106
TYR 2610.0104
GLY 2620.0120
THR 2630.0072
PHE 2640.0070
GLN 2650.0062
VAL 2660.0038
MET 2670.0035
GLN 2680.0032
ASP 2690.0037
LYS 2700.0044
GLY 2710.0027
THR 2720.0025
ARG 2730.0028
ALA 2740.0042
ASP 2750.0067
MET 2760.0082
TYR 2770.0098
ARG 2780.0089
GLN 2790.0076
TYR 2800.0103
LEU 2810.0130
LYS 2820.0137
PRO 2830.0133
VAL 2840.0148
LEU 2850.0159
GLY 2860.0167
ARG 2870.0183
ARG 2880.0183
ASN 2890.0175
LEU 2900.0145
GLN 2910.0112
VAL 2920.0109
LEU 2930.0076
THR 2940.0084
GLY 2950.0093
ALA 2960.0092
ALA 2970.0085
VAL 2980.0077
THR 2990.0072
LYS 3000.0065
VAL 3010.0059
ASN 3020.0054
ILE 3030.0046
ASP 3040.0028
GLN 3050.0062
ALA 3060.0175
ALA 3070.0329
GLY 3080.0205
LYS 3090.0062
ALA 3100.0027
GLN 3110.0046
ALA 3120.0043
LEU 3130.0048
GLY 3140.0048
VAL 3150.0058
GLU 3160.0065
PHE 3170.0092
SER 3180.0089
THR 3190.0087
ASP 3200.0139
GLY 3210.0111
PRO 3220.0102
THR 3230.0168
GLY 3240.0186
GLU 3250.0220
ARG 3260.0095
LEU 3270.0089
SER 3280.0094
ALA 3290.0022
GLU 3300.0012
LEU 3310.0025
ALA 3320.0078
PRO 3330.0094
GLY 3340.0103
GLY 3350.0042
GLU 3360.0035
VAL 3370.0026
ILE 3380.0019
MET 3390.0014
CYS 3400.0014
ALA 3410.0043
GLY 3420.0059
ALA 3430.0069
VAL 3440.0095
HISD 3450.0080
THR 3460.0071
PRO 3470.0089
PHE 3480.0069
LEU 3490.0065
LEU 3500.0083
LYS 3510.0076
HISE 3520.0064
SER 3530.0072
GLY 3540.0078
VAL 3550.0096
GLY 3560.0125
PRO 3570.0132
SER 3580.0142
ALA 3590.0159
GLU 3600.0125
LEU 3610.0115
LYS 3620.0151
GLU 3630.0137
PHE 3640.0101
GLY 3650.0092
ILE 3660.0099
PRO 3670.0128
VAL 3680.0095
VAL 3690.0097
SER 3700.0101
ASN 3710.0121
LEU 3720.0120
ALA 3730.0119
GLY 3740.0111
VAL 3750.0112
GLY 3760.0114
GLN 3770.0107
ASN 3780.0099
LEU 3790.0103
GLN 3800.0079
ASP 3810.0074
GLN 3820.0065
PRO 3830.0057
ALA 3840.0060
CYS 3850.0051
LEU 3860.0080
THR 3870.0083
ALA 3880.0092
ALA 3890.0087
PRO 3900.0049
VAL 3910.0044
LYS 3920.0170
GLU 3930.0233
LYS 3940.0222
TYR 3950.0095
ASP 3960.0132
GLY 3970.0140
ILE 3980.0053
ALA 3990.0056
ILE 4000.0063
SER 4010.0097
ASP 4020.0097
HISE 4030.0082
ILE 4040.0105
TYR 4050.0125
ASN 4060.0173
GLU 4070.0237
LYS 4080.0220
GLY 4090.0133
GLN 4100.0134
ILE 4110.0133
ARG 4120.0148
LYS 4130.0049
ARG 4140.0100
ALA 4150.0129
ILE 4160.0050
ALA 4170.0032
SER 4180.0066
TYR 4190.0033
LEU 4200.0054
LEU 4210.0081
GLY 4220.0063
GLY 4230.0040
ARG 4240.0055
GLY 4250.0066
GLY 4260.0071
LEU 4270.0061
THR 4280.0026
SER 4290.0026
THR 4300.0028
GLY 4310.0029
CYS 4320.0040
ASP 4330.0047
ARG 4340.0056
GLY 4350.0065
ALA 4360.0076
PHE 4370.0085
VAL 4380.0092
ARG 4390.0123
THR 4400.0143
ALA 4410.0186
GLY 4420.0204
GLN 4430.0309
ALA 4440.0244
LEU 4450.0161
PRO 4460.0113
ASP 4470.0084
LEU 4480.0046
GLN 4490.0045
VAL 4500.0039
ARG 4510.0043
PHE 4520.0054
VAL 4530.0047
PRO 4540.0041
GLY 4550.0075
MET 4560.0064
ALA 4570.0078
LEU 4580.0024
ASP 4590.0040
PRO 4600.0070
ASP 4610.0025
GLY 4620.0025
VAL 4630.0030
SER 4640.0019
THR 4650.0031
TYR 4660.0032
VAL 4670.0068
ARG 4680.0066
PHE 4690.0088
ALA 4700.0162
LYS 4710.0175
PHE 4720.0152
GLN 4730.0190
SER 4740.0309
GLN 4750.0305
GLY 4760.0181
LEU 4770.0204
LYS 4780.0201
TRP 4790.0115
PRO 4800.0093
SER 4810.0074
GLY 4820.0047
ILE 4830.0059
THR 4840.0072
MET 4850.0055
GLN 4860.0049
LEU 4870.0030
ILE 4880.0025
ALA 4890.0031
CYS 4900.0056
ARG 4910.0052
PRO 4920.0057
GLN 4930.0076
SER 4940.0065
THR 4950.0090
GLY 4960.0118
SER 4970.0125
VAL 4980.0111
GLY 4990.0100
LEU 5000.0076
LYS 5010.0058
SER 5020.0040
ALA 5030.0041
ASP 5040.0036
PRO 5050.0054
PHE 5060.0059
ALA 5070.0036
PRO 5080.0042
PRO 5090.0071
LYS 5100.0077
LEU 5110.0093
SER 5120.0117
PRO 5130.0122
GLY 5140.0120
TYR 5150.0091
LEU 5160.0099
THR 5170.0099
ASP 5180.0237
LYS 5190.0305
ASP 5200.0320
GLY 5210.0168
ALA 5220.0099
ASP 5230.0050
LEU 5240.0086
ALA 5250.0044
THR 5260.0034
LEU 5270.0048
ARG 5280.0084
LYS 5290.0079
GLY 5300.0026
ILE 5310.0057
HISE 5320.0066
TRP 5330.0019
ALA 5340.0028
ARG 5350.0064
ASP 5360.0045
VAL 5370.0016
ALA 5380.0052
ARG 5390.0052
SER 5400.0022
SER 5410.0020
ALA 5420.0043
LEU 5430.0055
SER 5440.0054
GLU 5450.0104
TYR 5460.0070
LEU 5470.0078
ASP 5480.0091
GLY 5490.0099
GLU 5500.0108
LEU 5510.0105
PHE 5520.0112
PRO 5530.0119
GLY 5540.0161
SER 5550.0135
GLY 5560.0091
VAL 5570.0147
VAL 5580.0294
SER 5590.0164
ASP 5600.0163
ASP 5610.0158
GLN 5620.0081
ILE 5630.0111
ASP 5640.0109
GLU 5650.0099
TYR 5660.0102
ILE 5670.0099
ARG 5680.0108
ARG 5690.0069
SER 5700.0081
ILE 5710.0083
HISD 5720.0041
SER 5730.0060
SER 5740.0062
ASN 5750.0069
ALA 5760.0082
ILE 5770.0089
THR 5780.0084
GLY 5790.0080
THR 5800.0089
CYS 5810.0077
LYS 5820.0061
MET 5830.0042
GLY 5840.0043
ASN 5850.0034
ALA 5860.0025
GLY 5870.0011
ASP 5880.0043
SER 5890.0075
SER 5900.0076
SER 5910.0070
VAL 5920.0076
VAL 5930.0054
ASP 5940.0047
ASN 5950.0066
GLN 5960.0066
LEU 5970.0063
ARG 5980.0063
VAL 5990.0065
HISE 6000.0057
GLY 6010.0049
VAL 6020.0037
GLU 6030.0050
GLY 6040.0062
LEU 6050.0036
ARG 6060.0035
VAL 6070.0037
VAL 6080.0031
ASP 6090.0019
ALA 6100.0020
SER 6110.0060
VAL 6120.0043
VAL 6130.0044
PRO 6140.0050
LYS 6150.0045
ILE 6160.0047
PRO 6170.0052
GLY 6180.0053
GLY 6190.0059
GLN 6200.0036
THR 6210.0026
GLY 6220.0030
ALA 6230.0040
PRO 6240.0043
VAL 6250.0040
VAL 6260.0052
MET 6270.0051
ILE 6280.0058
ALA 6290.0075
GLU 6300.0058
ARG 6310.0060
ALA 6320.0080
ALA 6330.0077
ALA 6340.0074
LEU 6350.0084
LEU 6360.0079
THR 6370.0080
GLY 6380.0099
LYS 6390.0107
ALA 6400.0100
THR 6410.0099
ILE 6420.0098
GLY 6430.0116
ALA 6440.0116
SER 6450.0078
ALA 6460.0120
ALA 6470.0128
ALA 6480.0089
PRO 6490.0055

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.