CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 58  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0536
SER 770.0201
PRO 780.0131
VAL 790.0100
ALA 800.0140
GLY 810.0129
GLN 820.0109
LYS 830.0069
TYR 840.0066
ASP 850.0065
TYR 860.0044
ILE 870.0047
LEU 880.0048
VAL 890.0042
GLY 900.0051
GLY 910.0053
GLY 920.0050
THR 930.0043
ALA 940.0041
ALA 950.0036
CYS 960.0022
VAL 970.0020
LEU 980.0022
ALA 990.0021
ASN 1000.0017
ARG 1010.0023
LEU 1020.0027
SER 1030.0028
ALA 1040.0044
ASP 1050.0058
GLY 1060.0056
SER 1070.0052
LYS 1080.0050
ARG 1090.0063
VAL 1100.0043
LEU 1110.0047
VAL 1120.0049
LEU 1130.0051
GLU 1140.0067
ALA 1150.0083
GLY 1160.0117
PRO 1170.0115
ASP 1180.0104
ASN 1190.0123
THR 1200.0159
SER 1210.0142
ARG 1220.0171
ASP 1230.0109
VAL 1240.0079
LYS 1250.0113
ILE 1260.0116
PRO 1270.0092
ALA 1280.0084
ALA 1290.0088
ILE 1300.0059
THR 1310.0056
ARG 1320.0070
LEU 1330.0073
PHE 1340.0061
ARG 1350.0065
SER 1360.0086
PRO 1370.0107
LEU 1380.0087
ASP 1390.0093
TRP 1400.0082
ASN 1410.0072
LEU 1420.0066
PHE 1430.0077
SER 1440.0079
GLU 1450.0113
LEU 1460.0200
GLN 1470.0156
GLU 1480.0251
GLN 1490.0135
LEU 1500.0138
ALA 1510.0185
GLU 1520.0251
ARG 1530.0175
GLN 1540.0118
ILE 1550.0021
TYR 1560.0036
MET 1570.0048
ALA 1580.0074
ARG 1590.0081
GLY 1600.0082
ARG 1610.0098
LEU 1620.0080
LEU 1630.0062
GLY 1640.0051
GLY 1650.0074
SER 1660.0082
SER 1670.0065
ALA 1680.0049
THR 1690.0055
ASN 1700.0063
ALA 1710.0055
THR 1720.0065
LEU 1730.0077
TYR 1740.0068
HISD 1750.0065
ARG 1760.0051
GLY 1770.0051
ALA 1780.0069
ALA 1790.0125
GLY 1800.0104
ASP 1810.0088
TYR 1820.0081
ASP 1830.0105
ALA 1840.0087
TRP 1850.0096
GLY 1860.0127
VAL 1870.0124
GLU 1880.0146
GLY 1890.0126
TRP 1900.0106
SER 1910.0113
SER 1920.0109
GLU 1930.0132
ASP 1940.0086
VAL 1950.0077
LEU 1960.0079
SER 1970.0031
TRP 1980.0029
PHE 1990.0029
VAL 2000.0042
GLN 2010.0046
ALA 2020.0043
GLU 2030.0057
THR 2040.0061
ASN 2050.0062
ALA 2060.0065
ASP 2070.0060
PHE 2080.0062
GLY 2090.0078
PRO 2100.0101
GLY 2110.0112
ALA 2120.0096
TYR 2130.0064
HISH 2140.0062
GLY 2150.0072
SER 2160.0080
GLY 2170.0075
GLY 2180.0058
PRO 2190.0052
MET 2200.0050
ARG 2210.0072
VAL 2220.0081
GLU 2230.0091
ASN 2240.0063
PRO 2250.0033
ARG 2260.0052
TYR 2270.0075
THR 2280.0087
ASN 2290.0094
LYS 2300.0207
GLN 2310.0169
LEU 2320.0098
HISE 2330.0066
THR 2340.0103
ALA 2350.0112
PHE 2360.0082
PHE 2370.0092
LYS 2380.0097
ALA 2390.0100
ALA 2400.0127
GLU 2410.0158
GLU 2420.0160
VAL 2430.0194
GLY 2440.0236
LEU 2450.0220
THR 2460.0270
PRO 2470.0269
ASN 2480.0196
SER 2490.0239
ASP 2500.0162
PHE 2510.0053
ASN 2520.0034
ASP 2530.0051
TRP 2540.0105
SER 2550.0148
HISE 2560.0181
ASP 2570.0075
HISE 2580.0028
ALA 2590.0053
GLY 2600.0134
TYR 2610.0132
GLY 2620.0174
THR 2630.0093
PHE 2640.0088
GLN 2650.0084
VAL 2660.0072
MET 2670.0055
GLN 2680.0050
ASP 2690.0117
LYS 2700.0163
GLY 2710.0081
THR 2720.0092
ARG 2730.0053
ALA 2740.0049
ASP 2750.0030
MET 2760.0018
TYR 2770.0023
ARG 2780.0052
GLN 2790.0048
TYR 2800.0026
LEU 2810.0024
LYS 2820.0064
PRO 2830.0087
VAL 2840.0040
LEU 2850.0048
GLY 2860.0060
ARG 2870.0067
ARG 2880.0089
ASN 2890.0020
LEU 2900.0037
GLN 2910.0042
VAL 2920.0043
LEU 2930.0066
THR 2940.0082
GLY 2950.0090
ALA 2960.0046
ALA 2970.0047
VAL 2980.0049
THR 2990.0053
LYS 3000.0049
VAL 3010.0046
ASN 3020.0047
ILE 3030.0051
ASP 3040.0055
GLN 3050.0078
ALA 3060.0130
ALA 3070.0274
GLY 3080.0172
LYS 3090.0052
ALA 3100.0033
GLN 3110.0028
ALA 3120.0040
LEU 3130.0046
GLY 3140.0053
VAL 3150.0058
GLU 3160.0069
PHE 3170.0062
SER 3180.0034
THR 3190.0017
ASP 3200.0133
GLY 3210.0149
PRO 3220.0150
THR 3230.0265
GLY 3240.0185
GLU 3250.0112
ARG 3260.0060
LEU 3270.0070
SER 3280.0100
ALA 3290.0071
GLU 3300.0058
LEU 3310.0046
ALA 3320.0066
PRO 3330.0177
GLY 3340.0203
GLY 3350.0056
GLU 3360.0044
VAL 3370.0041
ILE 3380.0038
MET 3390.0040
CYS 3400.0048
ALA 3410.0051
GLY 3420.0051
ALA 3430.0048
VAL 3440.0052
HISD 3450.0050
THR 3460.0043
PRO 3470.0034
PHE 3480.0036
LEU 3490.0044
LEU 3500.0045
LYS 3510.0041
HISE 3520.0044
SER 3530.0053
GLY 3540.0055
VAL 3550.0058
GLY 3560.0070
PRO 3570.0100
SER 3580.0126
ALA 3590.0178
GLU 3600.0135
LEU 3610.0095
LYS 3620.0142
GLU 3630.0159
PHE 3640.0103
GLY 3650.0084
ILE 3660.0056
PRO 3670.0081
VAL 3680.0076
VAL 3690.0089
SER 3700.0084
ASN 3710.0087
LEU 3720.0048
ALA 3730.0042
GLY 3740.0015
VAL 3750.0017
GLY 3760.0016
GLN 3770.0008
ASN 3780.0014
LEU 3790.0008
GLN 3800.0022
ASP 3810.0020
GLN 3820.0018
PRO 3830.0039
ALA 3840.0036
CYS 3850.0040
LEU 3860.0059
THR 3870.0059
ALA 3880.0057
ALA 3890.0101
PRO 3900.0111
VAL 3910.0092
LYS 3920.0230
GLU 3930.0210
LYS 3940.0235
TYR 3950.0094
ASP 3960.0220
GLY 3970.0267
ILE 3980.0101
ALA 3990.0054
ILE 4000.0069
SER 4010.0093
ASP 4020.0102
HISE 4030.0099
ILE 4040.0108
TYR 4050.0071
ASN 4060.0075
GLU 4070.0205
LYS 4080.0178
GLY 4090.0029
GLN 4100.0024
ILE 4110.0073
ARG 4120.0103
LYS 4130.0094
ARG 4140.0135
ALA 4150.0166
ILE 4160.0110
ALA 4170.0059
SER 4180.0099
TYR 4190.0045
LEU 4200.0136
LEU 4210.0222
GLY 4220.0114
GLY 4230.0034
ARG 4240.0097
GLY 4250.0116
GLY 4260.0151
LEU 4270.0128
THR 4280.0071
SER 4290.0050
THR 4300.0043
GLY 4310.0027
CYS 4320.0058
ASP 4330.0064
ARG 4340.0071
GLY 4350.0081
ALA 4360.0094
PHE 4370.0059
VAL 4380.0080
ARG 4390.0111
THR 4400.0236
ALA 4410.0309
GLY 4420.0289
GLN 4430.0536
ALA 4440.0355
LEU 4450.0153
PRO 4460.0060
ASP 4470.0072
LEU 4480.0024
GLN 4490.0050
VAL 4500.0062
ARG 4510.0078
PHE 4520.0074
VAL 4530.0059
PRO 4540.0035
GLY 4550.0058
MET 4560.0057
ALA 4570.0059
LEU 4580.0013
ASP 4590.0015
PRO 4600.0038
ASP 4610.0027
GLY 4620.0038
VAL 4630.0037
SER 4640.0022
THR 4650.0023
TYR 4660.0029
VAL 4670.0039
ARG 4680.0040
PHE 4690.0038
ALA 4700.0066
LYS 4710.0084
PHE 4720.0069
GLN 4730.0070
SER 4740.0103
GLN 4750.0116
GLY 4760.0109
LEU 4770.0049
LYS 4780.0044
TRP 4790.0033
PRO 4800.0046
SER 4810.0057
GLY 4820.0068
ILE 4830.0069
THR 4840.0081
MET 4850.0064
GLN 4860.0060
LEU 4870.0053
ILE 4880.0026
ALA 4890.0018
CYS 4900.0033
ARG 4910.0061
PRO 4920.0056
GLN 4930.0084
SER 4940.0067
THR 4950.0049
GLY 4960.0044
SER 4970.0010
VAL 4980.0022
GLY 4990.0039
LEU 5000.0042
LYS 5010.0043
SER 5020.0050
ALA 5030.0070
ASP 5040.0036
PRO 5050.0075
PHE 5060.0070
ALA 5070.0048
PRO 5080.0044
PRO 5090.0054
LYS 5100.0051
LEU 5110.0041
SER 5120.0055
PRO 5130.0018
GLY 5140.0040
TYR 5150.0060
LEU 5160.0082
THR 5170.0091
ASP 5180.0121
LYS 5190.0184
ASP 5200.0323
GLY 5210.0120
ALA 5220.0131
ASP 5230.0089
LEU 5240.0060
ALA 5250.0082
THR 5260.0076
LEU 5270.0052
ARG 5280.0052
LYS 5290.0083
GLY 5300.0034
ILE 5310.0041
HISE 5320.0059
TRP 5330.0072
ALA 5340.0058
ARG 5350.0061
ASP 5360.0118
VAL 5370.0097
ALA 5380.0092
ARG 5390.0111
SER 5400.0128
SER 5410.0137
ALA 5420.0120
LEU 5430.0111
SER 5440.0153
GLU 5450.0247
TYR 5460.0149
LEU 5470.0166
ASP 5480.0167
GLY 5490.0140
GLU 5500.0114
LEU 5510.0042
PHE 5520.0040
PRO 5530.0040
GLY 5540.0068
SER 5550.0151
GLY 5560.0111
VAL 5570.0025
VAL 5580.0105
SER 5590.0095
ASP 5600.0042
ASP 5610.0039
GLN 5620.0038
ILE 5630.0056
ASP 5640.0067
GLU 5650.0064
TYR 5660.0066
ILE 5670.0071
ARG 5680.0075
ARG 5690.0079
SER 5700.0068
ILE 5710.0066
HISD 5720.0023
SER 5730.0029
SER 5740.0045
ASN 5750.0052
ALA 5760.0052
ILE 5770.0049
THR 5780.0019
GLY 5790.0018
THR 5800.0017
CYS 5810.0020
LYS 5820.0029
MET 5830.0045
GLY 5840.0109
ASN 5850.0180
ALA 5860.0228
GLY 5870.0263
ASP 5880.0191
SER 5890.0157
SER 5900.0073
SER 5910.0050
VAL 5920.0019
VAL 5930.0029
ASP 5940.0053
ASN 5950.0065
GLN 5960.0025
LEU 5970.0016
ARG 5980.0012
VAL 5990.0024
HISE 6000.0019
GLY 6010.0044
VAL 6020.0044
GLU 6030.0039
GLY 6040.0047
LEU 6050.0032
ARG 6060.0029
VAL 6070.0033
VAL 6080.0032
ASP 6090.0038
ALA 6100.0041
SER 6110.0012
VAL 6120.0015
VAL 6130.0018
PRO 6140.0048
LYS 6150.0036
ILE 6160.0017
PRO 6170.0025
GLY 6180.0015
GLY 6190.0021
GLN 6200.0053
THR 6210.0053
GLY 6220.0056
ALA 6230.0025
PRO 6240.0029
VAL 6250.0025
VAL 6260.0010
MET 6270.0009
ILE 6280.0008
ALA 6290.0011
GLU 6300.0013
ARG 6310.0021
ALA 6320.0016
ALA 6330.0021
ALA 6340.0022
LEU 6350.0023
LEU 6360.0024
THR 6370.0034
GLY 6380.0039
LYS 6390.0054
ALA 6400.0044
THR 6410.0040
ILE 6420.0046
GLY 6430.0041
ALA 6440.0065
SER 6450.0044
ALA 6460.0046
ALA 6470.0055
ALA 6480.0033
PRO 6490.0021

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.