CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 72  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0411
SER 770.0144
PRO 780.0125
VAL 790.0083
ALA 800.0099
GLY 810.0107
GLN 820.0109
LYS 830.0084
TYR 840.0086
ASP 850.0081
TYR 860.0065
ILE 870.0062
LEU 880.0061
VAL 890.0032
GLY 900.0030
GLY 910.0025
GLY 920.0025
THR 930.0032
ALA 940.0036
ALA 950.0038
CYS 960.0034
VAL 970.0035
LEU 980.0049
ALA 990.0053
ASN 1000.0055
ARG 1010.0050
LEU 1020.0056
SER 1030.0053
ALA 1040.0077
ASP 1050.0100
GLY 1060.0117
SER 1070.0100
LYS 1080.0098
ARG 1090.0098
VAL 1100.0087
LEU 1110.0077
VAL 1120.0072
LEU 1130.0061
GLU 1140.0058
ALA 1150.0057
GLY 1160.0073
PRO 1170.0087
ASP 1180.0079
ASN 1190.0066
THR 1200.0098
SER 1210.0137
ARG 1220.0165
ASP 1230.0144
VAL 1240.0100
LYS 1250.0082
ILE 1260.0072
PRO 1270.0057
ALA 1280.0067
ALA 1290.0070
ILE 1300.0087
THR 1310.0105
ARG 1320.0107
LEU 1330.0117
PHE 1340.0127
ARG 1350.0145
SER 1360.0165
PRO 1370.0200
LEU 1380.0128
ASP 1390.0110
TRP 1400.0119
ASN 1410.0129
LEU 1420.0131
PHE 1430.0177
SER 1440.0147
GLU 1450.0152
LEU 1460.0120
GLN 1470.0072
GLU 1480.0219
GLN 1490.0133
LEU 1500.0084
ALA 1510.0112
GLU 1520.0226
ARG 1530.0148
GLN 1540.0160
ILE 1550.0097
TYR 1560.0108
MET 1570.0093
ALA 1580.0065
ARG 1590.0059
GLY 1600.0063
ARG 1610.0062
LEU 1620.0058
LEU 1630.0032
GLY 1640.0045
GLY 1650.0040
SER 1660.0051
SER 1670.0062
ALA 1680.0067
THR 1690.0089
ASN 1700.0071
ALA 1710.0064
THR 1720.0056
LEU 1730.0033
TYR 1740.0035
HISD 1750.0039
ARG 1760.0067
GLY 1770.0095
ALA 1780.0105
ALA 1790.0122
GLY 1800.0126
ASP 1810.0127
TYR 1820.0100
ASP 1830.0121
ALA 1840.0145
TRP 1850.0101
GLY 1860.0092
VAL 1870.0078
GLU 1880.0071
GLY 1890.0051
TRP 1900.0039
SER 1910.0090
SER 1920.0087
GLU 1930.0103
ASP 1940.0043
VAL 1950.0026
LEU 1960.0049
SER 1970.0085
TRP 1980.0063
PHE 1990.0055
VAL 2000.0095
GLN 2010.0112
ALA 2020.0105
GLU 2030.0087
THR 2040.0089
ASN 2050.0060
ALA 2060.0186
ASP 2070.0211
PHE 2080.0173
GLY 2090.0120
PRO 2100.0078
GLY 2110.0203
ALA 2120.0176
TYR 2130.0106
HISH 2140.0054
GLY 2150.0081
SER 2160.0124
GLY 2170.0144
GLY 2180.0088
PRO 2190.0081
MET 2200.0069
ARG 2210.0077
VAL 2220.0080
GLU 2230.0085
ASN 2240.0064
PRO 2250.0054
ARG 2260.0066
TYR 2270.0102
THR 2280.0113
ASN 2290.0132
LYS 2300.0204
GLN 2310.0139
LEU 2320.0118
HISE 2330.0098
THR 2340.0095
ALA 2350.0096
PHE 2360.0113
PHE 2370.0102
LYS 2380.0121
ALA 2390.0135
ALA 2400.0104
GLU 2410.0128
GLU 2420.0140
VAL 2430.0125
GLY 2440.0102
LEU 2450.0096
THR 2460.0132
PRO 2470.0165
ASN 2480.0158
SER 2490.0165
ASP 2500.0099
PHE 2510.0068
ASN 2520.0081
ASP 2530.0124
TRP 2540.0159
SER 2550.0218
HISE 2560.0206
ASP 2570.0172
HISE 2580.0101
ALA 2590.0083
GLY 2600.0077
TYR 2610.0091
GLY 2620.0094
THR 2630.0048
PHE 2640.0027
GLN 2650.0038
VAL 2660.0047
MET 2670.0044
GLN 2680.0034
ASP 2690.0133
LYS 2700.0215
GLY 2710.0027
THR 2720.0016
ARG 2730.0028
ALA 2740.0033
ASP 2750.0030
MET 2760.0033
TYR 2770.0035
ARG 2780.0068
GLN 2790.0070
TYR 2800.0064
LEU 2810.0073
LYS 2820.0110
PRO 2830.0141
VAL 2840.0102
LEU 2850.0096
GLY 2860.0096
ARG 2870.0091
ARG 2880.0139
ASN 2890.0154
LEU 2900.0088
GLN 2910.0084
VAL 2920.0078
LEU 2930.0063
THR 2940.0065
GLY 2950.0068
ALA 2960.0085
ALA 2970.0098
VAL 2980.0090
THR 2990.0120
LYS 3000.0083
VAL 3010.0042
ASN 3020.0057
ILE 3030.0081
ASP 3040.0160
GLN 3050.0187
ALA 3060.0143
ALA 3070.0218
GLY 3080.0171
LYS 3090.0115
ALA 3100.0013
GLN 3110.0116
ALA 3120.0075
LEU 3130.0136
GLY 3140.0011
VAL 3150.0045
GLU 3160.0074
PHE 3170.0114
SER 3180.0107
THR 3190.0089
ASP 3200.0040
GLY 3210.0039
PRO 3220.0078
THR 3230.0278
GLY 3240.0139
GLU 3250.0167
ARG 3260.0117
LEU 3270.0086
SER 3280.0084
ALA 3290.0048
GLU 3300.0035
LEU 3310.0048
ALA 3320.0067
PRO 3330.0146
GLY 3340.0165
GLY 3350.0049
GLU 3360.0045
VAL 3370.0039
ILE 3380.0022
MET 3390.0011
CYS 3400.0017
ALA 3410.0018
GLY 3420.0027
ALA 3430.0035
VAL 3440.0054
HISD 3450.0045
THR 3460.0049
PRO 3470.0049
PHE 3480.0039
LEU 3490.0040
LEU 3500.0038
LYS 3510.0030
HISE 3520.0032
SER 3530.0042
GLY 3540.0025
VAL 3550.0019
GLY 3560.0033
PRO 3570.0052
SER 3580.0073
ALA 3590.0097
GLU 3600.0087
LEU 3610.0060
LYS 3620.0095
GLU 3630.0115
PHE 3640.0092
GLY 3650.0063
ILE 3660.0043
PRO 3670.0055
VAL 3680.0045
VAL 3690.0033
SER 3700.0040
ASN 3710.0053
LEU 3720.0042
ALA 3730.0060
GLY 3740.0064
VAL 3750.0054
GLY 3760.0067
GLN 3770.0072
ASN 3780.0070
LEU 3790.0058
GLN 3800.0045
ASP 3810.0056
GLN 3820.0064
PRO 3830.0085
ALA 3840.0074
CYS 3850.0071
LEU 3860.0022
THR 3870.0045
ALA 3880.0066
ALA 3890.0101
PRO 3900.0097
VAL 3910.0093
LYS 3920.0159
GLU 3930.0176
LYS 3940.0247
TYR 3950.0138
ASP 3960.0162
GLY 3970.0182
ILE 3980.0104
ALA 3990.0099
ILE 4000.0119
SER 4010.0091
ASP 4020.0086
HISE 4030.0105
ILE 4040.0028
TYR 4050.0010
ASN 4060.0028
GLU 4070.0068
LYS 4080.0042
GLY 4090.0027
GLN 4100.0031
ILE 4110.0027
ARG 4120.0021
LYS 4130.0044
ARG 4140.0098
ALA 4150.0077
ILE 4160.0068
ALA 4170.0052
SER 4180.0057
TYR 4190.0052
LEU 4200.0081
LEU 4210.0111
GLY 4220.0091
GLY 4230.0062
ARG 4240.0059
GLY 4250.0053
GLY 4260.0066
LEU 4270.0056
THR 4280.0026
SER 4290.0022
THR 4300.0041
GLY 4310.0060
CYS 4320.0050
ASP 4330.0033
ARG 4340.0054
GLY 4350.0050
ALA 4360.0039
PHE 4370.0013
VAL 4380.0057
ARG 4390.0081
THR 4400.0079
ALA 4410.0123
GLY 4420.0117
GLN 4430.0411
ALA 4440.0285
LEU 4450.0134
PRO 4460.0031
ASP 4470.0023
LEU 4480.0053
GLN 4490.0049
VAL 4500.0050
ARG 4510.0053
PHE 4520.0075
VAL 4530.0088
PRO 4540.0097
GLY 4550.0053
MET 4560.0065
ALA 4570.0101
LEU 4580.0101
ASP 4590.0089
PRO 4600.0070
ASP 4610.0069
GLY 4620.0065
VAL 4630.0069
SER 4640.0100
THR 4650.0094
TYR 4660.0090
VAL 4670.0102
ARG 4680.0088
PHE 4690.0068
ALA 4700.0073
LYS 4710.0037
PHE 4720.0010
GLN 4730.0066
SER 4740.0149
GLN 4750.0171
GLY 4760.0093
LEU 4770.0081
LYS 4780.0076
TRP 4790.0059
PRO 4800.0051
SER 4810.0051
GLY 4820.0060
ILE 4830.0054
THR 4840.0054
MET 4850.0032
GLN 4860.0029
LEU 4870.0050
ILE 4880.0082
ALA 4890.0080
CYS 4900.0074
ARG 4910.0059
PRO 4920.0100
GLN 4930.0132
SER 4940.0083
THR 4950.0093
GLY 4960.0090
SER 4970.0094
VAL 4980.0085
GLY 4990.0093
LEU 5000.0070
LYS 5010.0077
SER 5020.0047
ALA 5030.0035
ASP 5040.0043
PRO 5050.0097
PHE 5060.0081
ALA 5070.0046
PRO 5080.0101
PRO 5090.0097
LYS 5100.0124
LEU 5110.0122
SER 5120.0106
PRO 5130.0096
GLY 5140.0084
TYR 5150.0096
LEU 5160.0100
THR 5170.0095
ASP 5180.0187
LYS 5190.0208
ASP 5200.0173
GLY 5210.0167
ALA 5220.0163
ASP 5230.0135
LEU 5240.0125
ALA 5250.0136
THR 5260.0124
LEU 5270.0095
ARG 5280.0100
LYS 5290.0104
GLY 5300.0070
ILE 5310.0061
HISE 5320.0106
TRP 5330.0065
ALA 5340.0053
ARG 5350.0083
ASP 5360.0111
VAL 5370.0099
ALA 5380.0101
ARG 5390.0115
SER 5400.0095
SER 5410.0093
ALA 5420.0077
LEU 5430.0076
SER 5440.0053
GLU 5450.0139
TYR 5460.0080
LEU 5470.0080
ASP 5480.0184
GLY 5490.0175
GLU 5500.0123
LEU 5510.0111
PHE 5520.0078
PRO 5530.0080
GLY 5540.0088
SER 5550.0080
GLY 5560.0163
VAL 5570.0127
VAL 5580.0148
SER 5590.0126
ASP 5600.0099
ASP 5610.0099
GLN 5620.0115
ILE 5630.0078
ASP 5640.0080
GLU 5650.0094
TYR 5660.0085
ILE 5670.0087
ARG 5680.0091
ARG 5690.0066
SER 5700.0067
ILE 5710.0076
HISD 5720.0048
SER 5730.0041
SER 5740.0046
ASN 5750.0031
ALA 5760.0041
ILE 5770.0033
THR 5780.0051
GLY 5790.0061
THR 5800.0055
CYS 5810.0064
LYS 5820.0082
MET 5830.0084
GLY 5840.0101
ASN 5850.0146
ALA 5860.0200
GLY 5870.0157
ASP 5880.0168
SER 5890.0155
SER 5900.0130
SER 5910.0106
VAL 5920.0064
VAL 5930.0062
ASP 5940.0068
ASN 5950.0082
GLN 5960.0049
LEU 5970.0043
ARG 5980.0029
VAL 5990.0019
HISE 6000.0050
GLY 6010.0074
VAL 6020.0064
GLU 6030.0109
GLY 6040.0097
LEU 6050.0021
ARG 6060.0024
VAL 6070.0030
VAL 6080.0039
ASP 6090.0043
ALA 6100.0054
SER 6110.0056
VAL 6120.0066
VAL 6130.0074
PRO 6140.0090
LYS 6150.0065
ILE 6160.0066
PRO 6170.0080
GLY 6180.0070
GLY 6190.0074
GLN 6200.0061
THR 6210.0061
GLY 6220.0067
ALA 6230.0039
PRO 6240.0040
VAL 6250.0042
VAL 6260.0042
MET 6270.0034
ILE 6280.0037
ALA 6290.0051
GLU 6300.0051
ARG 6310.0043
ALA 6320.0051
ALA 6330.0047
ALA 6340.0042
LEU 6350.0037
LEU 6360.0029
THR 6370.0012
GLY 6380.0014
LYS 6390.0062
ALA 6400.0073
THR 6410.0075
ILE 6420.0070
GLY 6430.0066
ALA 6440.0064
SER 6450.0027
ALA 6460.0033
ALA 6470.0027
ALA 6480.0032
PRO 6490.0033

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.