CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 76  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0400
SER 770.0062
PRO 780.0037
VAL 790.0012
ALA 800.0017
GLY 810.0019
GLN 820.0028
LYS 830.0041
TYR 840.0051
ASP 850.0063
TYR 860.0055
ILE 870.0050
LEU 880.0058
VAL 890.0027
GLY 900.0030
GLY 910.0031
GLY 920.0043
THR 930.0034
ALA 940.0034
ALA 950.0046
CYS 960.0033
VAL 970.0033
LEU 980.0062
ALA 990.0043
ASN 1000.0037
ARG 1010.0067
LEU 1020.0081
SER 1030.0065
ALA 1040.0102
ASP 1050.0126
GLY 1060.0112
SER 1070.0097
LYS 1080.0090
ARG 1090.0063
VAL 1100.0042
LEU 1110.0035
VAL 1120.0044
LEU 1130.0034
GLU 1140.0036
ALA 1150.0036
GLY 1160.0026
PRO 1170.0029
ASP 1180.0036
ASN 1190.0030
THR 1200.0028
SER 1210.0046
ARG 1220.0096
ASP 1230.0098
VAL 1240.0040
LYS 1250.0048
ILE 1260.0084
PRO 1270.0087
ALA 1280.0058
ALA 1290.0059
ILE 1300.0064
THR 1310.0039
ARG 1320.0045
LEU 1330.0041
PHE 1340.0022
ARG 1350.0033
SER 1360.0048
PRO 1370.0047
LEU 1380.0027
ASP 1390.0025
TRP 1400.0044
ASN 1410.0047
LEU 1420.0072
PHE 1430.0085
SER 1440.0091
GLU 1450.0097
LEU 1460.0137
GLN 1470.0091
GLU 1480.0123
GLN 1490.0065
LEU 1500.0050
ALA 1510.0069
GLU 1520.0097
ARG 1530.0073
GLN 1540.0088
ILE 1550.0033
TYR 1560.0031
MET 1570.0040
ALA 1580.0029
ARG 1590.0033
GLY 1600.0023
ARG 1610.0023
LEU 1620.0018
LEU 1630.0034
GLY 1640.0034
GLY 1650.0030
SER 1660.0025
SER 1670.0029
ALA 1680.0018
THR 1690.0023
ASN 1700.0044
ALA 1710.0043
THR 1720.0038
LEU 1730.0033
TYR 1740.0040
HISD 1750.0042
ARG 1760.0035
GLY 1770.0028
ALA 1780.0018
ALA 1790.0025
GLY 1800.0030
ASP 1810.0032
TYR 1820.0060
ASP 1830.0073
ALA 1840.0060
TRP 1850.0050
GLY 1860.0050
VAL 1870.0060
GLU 1880.0082
GLY 1890.0088
TRP 1900.0071
SER 1910.0098
SER 1920.0086
GLU 1930.0147
ASP 1940.0111
VAL 1950.0094
LEU 1960.0092
SER 1970.0082
TRP 1980.0073
PHE 1990.0064
VAL 2000.0062
GLN 2010.0045
ALA 2020.0058
GLU 2030.0090
THR 2040.0097
ASN 2050.0113
ALA 2060.0132
ASP 2070.0142
PHE 2080.0144
GLY 2090.0137
PRO 2100.0107
GLY 2110.0103
ALA 2120.0096
TYR 2130.0086
HISH 2140.0083
GLY 2150.0094
SER 2160.0085
GLY 2170.0095
GLY 2180.0054
PRO 2190.0056
MET 2200.0068
ARG 2210.0069
VAL 2220.0067
GLU 2230.0053
ASN 2240.0058
PRO 2250.0068
ARG 2260.0079
TYR 2270.0070
THR 2280.0059
ASN 2290.0020
LYS 2300.0103
GLN 2310.0019
LEU 2320.0059
HISE 2330.0060
THR 2340.0070
ALA 2350.0083
PHE 2360.0063
PHE 2370.0071
LYS 2380.0078
ALA 2390.0049
ALA 2400.0059
GLU 2410.0097
GLU 2420.0073
VAL 2430.0072
GLY 2440.0117
LEU 2450.0078
THR 2460.0105
PRO 2470.0127
ASN 2480.0082
SER 2490.0046
ASP 2500.0023
PHE 2510.0022
ASN 2520.0020
ASP 2530.0033
TRP 2540.0044
SER 2550.0092
HISE 2560.0132
ASP 2570.0131
HISE 2580.0093
ALA 2590.0104
GLY 2600.0076
TYR 2610.0082
GLY 2620.0092
THR 2630.0031
PHE 2640.0016
GLN 2650.0030
VAL 2660.0040
MET 2670.0045
GLN 2680.0031
ASP 2690.0033
LYS 2700.0053
GLY 2710.0088
THR 2720.0025
ARG 2730.0025
ALA 2740.0029
ASP 2750.0033
MET 2760.0031
TYR 2770.0044
ARG 2780.0047
GLN 2790.0041
TYR 2800.0037
LEU 2810.0041
LYS 2820.0089
PRO 2830.0117
VAL 2840.0087
LEU 2850.0084
GLY 2860.0098
ARG 2870.0116
ARG 2880.0124
ASN 2890.0076
LEU 2900.0049
GLN 2910.0035
VAL 2920.0046
LEU 2930.0045
THR 2940.0047
GLY 2950.0047
ALA 2960.0031
ALA 2970.0034
VAL 2980.0033
THR 2990.0047
LYS 3000.0028
VAL 3010.0030
ASN 3020.0069
ILE 3030.0072
ASP 3040.0087
GLN 3050.0104
ALA 3060.0117
ALA 3070.0173
GLY 3080.0152
LYS 3090.0143
ALA 3100.0111
GLN 3110.0090
ALA 3120.0088
LEU 3130.0101
GLY 3140.0039
VAL 3150.0024
GLU 3160.0017
PHE 3170.0033
SER 3180.0035
THR 3190.0036
ASP 3200.0034
GLY 3210.0040
PRO 3220.0026
THR 3230.0133
GLY 3240.0041
GLU 3250.0079
ARG 3260.0039
LEU 3270.0023
SER 3280.0024
ALA 3290.0025
GLU 3300.0029
LEU 3310.0034
ALA 3320.0023
PRO 3330.0121
GLY 3340.0089
GLY 3350.0048
GLU 3360.0054
VAL 3370.0050
ILE 3380.0038
MET 3390.0035
CYS 3400.0034
ALA 3410.0036
GLY 3420.0043
ALA 3430.0049
VAL 3440.0060
HISD 3450.0051
THR 3460.0036
PRO 3470.0062
PHE 3480.0067
LEU 3490.0054
LEU 3500.0067
LYS 3510.0066
HISE 3520.0070
SER 3530.0067
GLY 3540.0060
VAL 3550.0056
GLY 3560.0086
PRO 3570.0087
SER 3580.0089
ALA 3590.0109
GLU 3600.0123
LEU 3610.0116
LYS 3620.0129
GLU 3630.0152
PHE 3640.0166
GLY 3650.0126
ILE 3660.0122
PRO 3670.0102
VAL 3680.0074
VAL 3690.0085
SER 3700.0070
ASN 3710.0061
LEU 3720.0035
ALA 3730.0019
GLY 3740.0018
VAL 3750.0029
GLY 3760.0042
GLN 3770.0035
ASN 3780.0033
LEU 3790.0034
GLN 3800.0032
ASP 3810.0030
GLN 3820.0027
PRO 3830.0044
ALA 3840.0022
CYS 3850.0017
LEU 3860.0042
THR 3870.0051
ALA 3880.0068
ALA 3890.0049
PRO 3900.0034
VAL 3910.0043
LYS 3920.0061
GLU 3930.0060
LYS 3940.0062
TYR 3950.0046
ASP 3960.0060
GLY 3970.0076
ILE 3980.0043
ALA 3990.0049
ILE 4000.0051
SER 4010.0059
ASP 4020.0059
HISE 4030.0067
ILE 4040.0093
TYR 4050.0080
ASN 4060.0082
GLU 4070.0129
LYS 4080.0188
GLY 4090.0108
GLN 4100.0160
ILE 4110.0170
ARG 4120.0149
LYS 4130.0266
ARG 4140.0317
ALA 4150.0062
ILE 4160.0061
ALA 4170.0092
SER 4180.0092
TYR 4190.0150
LEU 4200.0266
LEU 4210.0344
GLY 4220.0195
GLY 4230.0186
ARG 4240.0117
GLY 4250.0076
GLY 4260.0068
LEU 4270.0085
THR 4280.0077
SER 4290.0073
THR 4300.0071
GLY 4310.0026
CYS 4320.0026
ASP 4330.0027
ARG 4340.0043
GLY 4350.0049
ALA 4360.0054
PHE 4370.0070
VAL 4380.0100
ARG 4390.0116
THR 4400.0128
ALA 4410.0159
GLY 4420.0152
GLN 4430.0400
ALA 4440.0254
LEU 4450.0119
PRO 4460.0075
ASP 4470.0084
LEU 4480.0076
GLN 4490.0038
VAL 4500.0033
ARG 4510.0023
PHE 4520.0030
VAL 4530.0029
PRO 4540.0030
GLY 4550.0072
MET 4560.0063
ALA 4570.0071
LEU 4580.0105
ASP 4590.0087
PRO 4600.0070
ASP 4610.0055
GLY 4620.0047
VAL 4630.0036
SER 4640.0061
THR 4650.0074
TYR 4660.0066
VAL 4670.0099
ARG 4680.0118
PHE 4690.0121
ALA 4700.0151
LYS 4710.0164
PHE 4720.0152
GLN 4730.0125
SER 4740.0177
GLN 4750.0157
GLY 4760.0079
LEU 4770.0063
LYS 4780.0079
TRP 4790.0094
PRO 4800.0067
SER 4810.0051
GLY 4820.0043
ILE 4830.0050
THR 4840.0049
MET 4850.0019
GLN 4860.0012
LEU 4870.0016
ILE 4880.0040
ALA 4890.0067
CYS 4900.0060
ARG 4910.0083
PRO 4920.0100
GLN 4930.0152
SER 4940.0075
THR 4950.0050
GLY 4960.0053
SER 4970.0059
VAL 4980.0077
GLY 4990.0094
LEU 5000.0140
LYS 5010.0149
SER 5020.0144
ALA 5030.0170
ASP 5040.0161
PRO 5050.0148
PHE 5060.0122
ALA 5070.0134
PRO 5080.0143
PRO 5090.0111
LYS 5100.0110
LEU 5110.0094
SER 5120.0038
PRO 5130.0038
GLY 5140.0033
TYR 5150.0049
LEU 5160.0068
THR 5170.0112
ASP 5180.0262
LYS 5190.0077
ASP 5200.0205
GLY 5210.0223
ALA 5220.0209
ASP 5230.0144
LEU 5240.0113
ALA 5250.0152
THR 5260.0141
LEU 5270.0087
ARG 5280.0108
LYS 5290.0131
GLY 5300.0090
ILE 5310.0082
HISE 5320.0130
TRP 5330.0064
ALA 5340.0050
ARG 5350.0083
ASP 5360.0066
VAL 5370.0032
ALA 5380.0059
ARG 5390.0072
SER 5400.0051
SER 5410.0087
ALA 5420.0084
LEU 5430.0080
SER 5440.0085
GLU 5450.0107
TYR 5460.0084
LEU 5470.0055
ASP 5480.0051
GLY 5490.0056
GLU 5500.0075
LEU 5510.0093
PHE 5520.0087
PRO 5530.0088
GLY 5540.0149
SER 5550.0142
GLY 5560.0119
VAL 5570.0082
VAL 5580.0091
SER 5590.0055
ASP 5600.0106
ASP 5610.0104
GLN 5620.0089
ILE 5630.0067
ASP 5640.0044
GLU 5650.0042
TYR 5660.0055
ILE 5670.0035
ARG 5680.0006
ARG 5690.0049
SER 5700.0037
ILE 5710.0013
HISD 5720.0026
SER 5730.0025
SER 5740.0024
ASN 5750.0038
ALA 5760.0043
ILE 5770.0043
THR 5780.0039
GLY 5790.0041
THR 5800.0035
CYS 5810.0036
LYS 5820.0032
MET 5830.0034
GLY 5840.0063
ASN 5850.0060
ALA 5860.0092
GLY 5870.0295
ASP 5880.0130
SER 5890.0061
SER 5900.0028
SER 5910.0029
VAL 5920.0032
VAL 5930.0091
ASP 5940.0095
ASN 5950.0085
GLN 5960.0123
LEU 5970.0105
ARG 5980.0128
VAL 5990.0045
HISE 6000.0041
GLY 6010.0059
VAL 6020.0084
GLU 6030.0101
GLY 6040.0104
LEU 6050.0058
ARG 6060.0052
VAL 6070.0051
VAL 6080.0047
ASP 6090.0040
ALA 6100.0040
SER 6110.0040
VAL 6120.0037
VAL 6130.0038
PRO 6140.0042
LYS 6150.0041
ILE 6160.0040
PRO 6170.0026
GLY 6180.0016
GLY 6190.0010
GLN 6200.0027
THR 6210.0033
GLY 6220.0039
ALA 6230.0041
PRO 6240.0038
VAL 6250.0048
VAL 6260.0049
MET 6270.0044
ILE 6280.0062
ALA 6290.0081
GLU 6300.0070
ARG 6310.0088
ALA 6320.0133
ALA 6330.0122
ALA 6340.0134
LEU 6350.0140
LEU 6360.0120
THR 6370.0117
GLY 6380.0109
LYS 6390.0192
ALA 6400.0183
THR 6410.0249
ILE 6420.0185
GLY 6430.0203
ALA 6440.0108
SER 6450.0052
ALA 6460.0064
ALA 6470.0065
ALA 6480.0015
PRO 6490.0047

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.