CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 81  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0364
SER 770.0319
PRO 780.0192
VAL 790.0073
ALA 800.0104
GLY 810.0077
GLN 820.0078
LYS 830.0104
TYR 840.0094
ASP 850.0103
TYR 860.0070
ILE 870.0074
LEU 880.0074
VAL 890.0053
GLY 900.0051
GLY 910.0063
GLY 920.0067
THR 930.0069
ALA 940.0060
ALA 950.0057
CYS 960.0049
VAL 970.0046
LEU 980.0039
ALA 990.0060
ASN 1000.0040
ARG 1010.0028
LEU 1020.0084
SER 1030.0089
ALA 1040.0076
ASP 1050.0095
GLY 1060.0114
SER 1070.0117
LYS 1080.0100
ARG 1090.0108
VAL 1100.0061
LEU 1110.0064
VAL 1120.0069
LEU 1130.0089
GLU 1140.0094
ALA 1150.0091
GLY 1160.0107
PRO 1170.0118
ASP 1180.0132
ASN 1190.0113
THR 1200.0122
SER 1210.0100
ARG 1220.0069
ASP 1230.0058
VAL 1240.0061
LYS 1250.0059
ILE 1260.0050
PRO 1270.0050
ALA 1280.0041
ALA 1290.0017
ILE 1300.0038
THR 1310.0079
ARG 1320.0066
LEU 1330.0064
PHE 1340.0121
ARG 1350.0143
SER 1360.0143
PRO 1370.0171
LEU 1380.0103
ASP 1390.0077
TRP 1400.0083
ASN 1410.0107
LEU 1420.0078
PHE 1430.0112
SER 1440.0069
GLU 1450.0066
LEU 1460.0117
GLN 1470.0053
GLU 1480.0090
GLN 1490.0039
LEU 1500.0033
ALA 1510.0046
GLU 1520.0064
ARG 1530.0041
GLN 1540.0088
ILE 1550.0087
TYR 1560.0104
MET 1570.0078
ALA 1580.0065
ARG 1590.0024
GLY 1600.0036
ARG 1610.0099
LEU 1620.0092
LEU 1630.0087
GLY 1640.0077
GLY 1650.0075
SER 1660.0061
SER 1670.0064
ALA 1680.0052
THR 1690.0045
ASN 1700.0043
ALA 1710.0032
THR 1720.0038
LEU 1730.0049
TYR 1740.0067
HISD 1750.0086
ARG 1760.0094
GLY 1770.0055
ALA 1780.0056
ALA 1790.0048
GLY 1800.0092
ASP 1810.0101
TYR 1820.0085
ASP 1830.0153
ALA 1840.0197
TRP 1850.0143
GLY 1860.0180
VAL 1870.0160
GLU 1880.0126
GLY 1890.0110
TRP 1900.0080
SER 1910.0160
SER 1920.0081
GLU 1930.0162
ASP 1940.0140
VAL 1950.0108
LEU 1960.0138
SER 1970.0175
TRP 1980.0159
PHE 1990.0171
VAL 2000.0204
GLN 2010.0203
ALA 2020.0211
GLU 2030.0203
THR 2040.0133
ASN 2050.0069
ALA 2060.0077
ASP 2070.0199
PHE 2080.0214
GLY 2090.0150
PRO 2100.0133
GLY 2110.0088
ALA 2120.0086
TYR 2130.0155
HISH 2140.0135
GLY 2150.0161
SER 2160.0170
GLY 2170.0192
GLY 2180.0175
PRO 2190.0164
MET 2200.0167
ARG 2210.0130
VAL 2220.0088
GLU 2230.0038
ASN 2240.0043
PRO 2250.0034
ARG 2260.0033
TYR 2270.0030
THR 2280.0029
ASN 2290.0041
LYS 2300.0128
GLN 2310.0066
LEU 2320.0041
HISE 2330.0018
THR 2340.0021
ALA 2350.0018
PHE 2360.0060
PHE 2370.0065
LYS 2380.0070
ALA 2390.0099
ALA 2400.0119
GLU 2410.0116
GLU 2420.0160
VAL 2430.0175
GLY 2440.0184
LEU 2450.0094
THR 2460.0081
PRO 2470.0119
ASN 2480.0149
SER 2490.0204
ASP 2500.0174
PHE 2510.0107
ASN 2520.0119
ASP 2530.0126
TRP 2540.0118
SER 2550.0156
HISE 2560.0189
ASP 2570.0057
HISE 2580.0034
ALA 2590.0034
GLY 2600.0092
TYR 2610.0106
GLY 2620.0115
THR 2630.0064
PHE 2640.0062
GLN 2650.0063
VAL 2660.0039
MET 2670.0071
GLN 2680.0056
ASP 2690.0144
LYS 2700.0170
GLY 2710.0070
THR 2720.0046
ARG 2730.0046
ALA 2740.0080
ASP 2750.0093
MET 2760.0092
TYR 2770.0073
ARG 2780.0067
GLN 2790.0080
TYR 2800.0071
LEU 2810.0061
LYS 2820.0068
PRO 2830.0056
VAL 2840.0063
LEU 2850.0062
GLY 2860.0064
ARG 2870.0120
ARG 2880.0127
ASN 2890.0101
LEU 2900.0069
GLN 2910.0062
VAL 2920.0070
LEU 2930.0096
THR 2940.0112
GLY 2950.0115
ALA 2960.0100
ALA 2970.0117
VAL 2980.0116
THR 2990.0128
LYS 3000.0092
VAL 3010.0059
ASN 3020.0060
ILE 3030.0052
ASP 3040.0063
GLN 3050.0089
ALA 3060.0167
ALA 3070.0171
GLY 3080.0263
LYS 3090.0153
ALA 3100.0070
GLN 3110.0076
ALA 3120.0065
LEU 3130.0058
GLY 3140.0053
VAL 3150.0083
GLU 3160.0119
PHE 3170.0153
SER 3180.0141
THR 3190.0112
ASP 3200.0067
GLY 3210.0127
PRO 3220.0088
THR 3230.0176
GLY 3240.0088
GLU 3250.0197
ARG 3260.0161
LEU 3270.0121
SER 3280.0117
ALA 3290.0048
GLU 3300.0040
LEU 3310.0065
ALA 3320.0155
PRO 3330.0235
GLY 3340.0224
GLY 3350.0072
GLU 3360.0074
VAL 3370.0072
ILE 3380.0034
MET 3390.0036
CYS 3400.0041
ALA 3410.0023
GLY 3420.0030
ALA 3430.0046
VAL 3440.0028
HISD 3450.0031
THR 3460.0042
PRO 3470.0053
PHE 3480.0041
LEU 3490.0035
LEU 3500.0069
LYS 3510.0075
HISE 3520.0070
SER 3530.0075
GLY 3540.0077
VAL 3550.0082
GLY 3560.0100
PRO 3570.0079
SER 3580.0098
ALA 3590.0103
GLU 3600.0109
LEU 3610.0139
LYS 3620.0182
GLU 3630.0163
PHE 3640.0196
GLY 3650.0214
ILE 3660.0189
PRO 3670.0183
VAL 3680.0098
VAL 3690.0055
SER 3700.0047
ASN 3710.0056
LEU 3720.0056
ALA 3730.0056
GLY 3740.0045
VAL 3750.0060
GLY 3760.0059
GLN 3770.0049
ASN 3780.0055
LEU 3790.0048
GLN 3800.0050
ASP 3810.0051
GLN 3820.0054
PRO 3830.0019
ALA 3840.0015
CYS 3850.0016
LEU 3860.0039
THR 3870.0035
ALA 3880.0046
ALA 3890.0047
PRO 3900.0047
VAL 3910.0055
LYS 3920.0148
GLU 3930.0109
LYS 3940.0106
TYR 3950.0036
ASP 3960.0044
GLY 3970.0068
ILE 3980.0041
ALA 3990.0041
ILE 4000.0052
SER 4010.0034
ASP 4020.0029
HISE 4030.0025
ILE 4040.0039
TYR 4050.0023
ASN 4060.0019
GLU 4070.0129
LYS 4080.0154
GLY 4090.0069
GLN 4100.0102
ILE 4110.0129
ARG 4120.0122
LYS 4130.0188
ARG 4140.0261
ALA 4150.0299
ILE 4160.0192
ALA 4170.0141
SER 4180.0165
TYR 4190.0087
LEU 4200.0095
LEU 4210.0120
GLY 4220.0044
GLY 4230.0062
ARG 4240.0098
GLY 4250.0089
GLY 4260.0091
LEU 4270.0090
THR 4280.0049
SER 4290.0028
THR 4300.0032
GLY 4310.0061
CYS 4320.0057
ASP 4330.0049
ARG 4340.0060
GLY 4350.0062
ALA 4360.0071
PHE 4370.0080
VAL 4380.0079
ARG 4390.0084
THR 4400.0092
ALA 4410.0092
GLY 4420.0102
GLN 4430.0080
ALA 4440.0079
LEU 4450.0078
PRO 4460.0082
ASP 4470.0076
LEU 4480.0071
GLN 4490.0056
VAL 4500.0053
ARG 4510.0051
PHE 4520.0048
VAL 4530.0052
PRO 4540.0050
GLY 4550.0058
MET 4560.0059
ALA 4570.0061
LEU 4580.0066
ASP 4590.0060
PRO 4600.0067
ASP 4610.0062
GLY 4620.0086
VAL 4630.0083
SER 4640.0077
THR 4650.0076
TYR 4660.0082
VAL 4670.0085
ARG 4680.0062
PHE 4690.0067
ALA 4700.0094
LYS 4710.0099
PHE 4720.0073
GLN 4730.0092
SER 4740.0214
GLN 4750.0240
GLY 4760.0091
LEU 4770.0077
LYS 4780.0063
TRP 4790.0029
PRO 4800.0041
SER 4810.0046
GLY 4820.0042
ILE 4830.0040
THR 4840.0040
MET 4850.0046
GLN 4860.0045
LEU 4870.0045
ILE 4880.0021
ALA 4890.0024
CYS 4900.0032
ARG 4910.0036
PRO 4920.0037
GLN 4930.0051
SER 4940.0034
THR 4950.0036
GLY 4960.0041
SER 4970.0047
VAL 4980.0051
GLY 4990.0057
LEU 5000.0097
LYS 5010.0088
SER 5020.0078
ALA 5030.0099
ASP 5040.0044
PRO 5050.0123
PHE 5060.0132
ALA 5070.0079
PRO 5080.0095
PRO 5090.0033
LYS 5100.0032
LEU 5110.0019
SER 5120.0015
PRO 5130.0034
GLY 5140.0031
TYR 5150.0040
LEU 5160.0035
THR 5170.0053
ASP 5180.0120
LYS 5190.0043
ASP 5200.0117
GLY 5210.0095
ALA 5220.0074
ASP 5230.0032
LEU 5240.0038
ALA 5250.0059
THR 5260.0056
LEU 5270.0039
ARG 5280.0048
LYS 5290.0053
GLY 5300.0059
ILE 5310.0042
HISE 5320.0045
TRP 5330.0091
ALA 5340.0065
ARG 5350.0058
ASP 5360.0131
VAL 5370.0103
ALA 5380.0060
ARG 5390.0085
SER 5400.0112
SER 5410.0116
ALA 5420.0031
LEU 5430.0020
SER 5440.0046
GLU 5450.0127
TYR 5460.0078
LEU 5470.0066
ASP 5480.0087
GLY 5490.0066
GLU 5500.0062
LEU 5510.0064
PHE 5520.0060
PRO 5530.0056
GLY 5540.0111
SER 5550.0165
GLY 5560.0107
VAL 5570.0098
VAL 5580.0093
SER 5590.0106
ASP 5600.0155
ASP 5610.0156
GLN 5620.0115
ILE 5630.0071
ASP 5640.0072
GLU 5650.0070
TYR 5660.0057
ILE 5670.0053
ARG 5680.0046
ARG 5690.0039
SER 5700.0045
ILE 5710.0043
HISD 5720.0034
SER 5730.0036
SER 5740.0036
ASN 5750.0047
ALA 5760.0050
ILE 5770.0041
THR 5780.0051
GLY 5790.0059
THR 5800.0052
CYS 5810.0042
LYS 5820.0045
MET 5830.0051
GLY 5840.0086
ASN 5850.0172
ALA 5860.0175
GLY 5870.0308
ASP 5880.0169
SER 5890.0098
SER 5900.0042
SER 5910.0034
VAL 5920.0034
VAL 5930.0045
ASP 5940.0055
ASN 5950.0061
GLN 5960.0037
LEU 5970.0046
ARG 5980.0058
VAL 5990.0029
HISE 6000.0057
GLY 6010.0087
VAL 6020.0071
GLU 6030.0056
GLY 6040.0021
LEU 6050.0027
ARG 6060.0025
VAL 6070.0025
VAL 6080.0026
ASP 6090.0034
ALA 6100.0047
SER 6110.0043
VAL 6120.0045
VAL 6130.0050
PRO 6140.0084
LYS 6150.0089
ILE 6160.0075
PRO 6170.0043
GLY 6180.0041
GLY 6190.0046
GLN 6200.0038
THR 6210.0045
GLY 6220.0064
ALA 6230.0093
PRO 6240.0064
VAL 6250.0056
VAL 6260.0092
MET 6270.0083
ILE 6280.0032
ALA 6290.0029
GLU 6300.0059
ARG 6310.0052
ALA 6320.0039
ALA 6330.0072
ALA 6340.0094
LEU 6350.0093
LEU 6360.0120
THR 6370.0155
GLY 6380.0265
LYS 6390.0254
ALA 6400.0227
THR 6410.0169
ILE 6420.0126
GLY 6430.0161
ALA 6440.0364
SER 6450.0097
ALA 6460.0146
ALA 6470.0093
ALA 6480.0105
PRO 6490.0088

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.