CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 86  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0754
SER 770.0348
PRO 780.0287
VAL 790.0134
ALA 800.0190
GLY 810.0127
GLN 820.0116
LYS 830.0100
TYR 840.0123
ASP 850.0134
TYR 860.0072
ILE 870.0084
LEU 880.0089
VAL 890.0055
GLY 900.0054
GLY 910.0068
GLY 920.0073
THR 930.0068
ALA 940.0062
ALA 950.0065
CYS 960.0059
VAL 970.0044
LEU 980.0047
ALA 990.0047
ASN 1000.0022
ARG 1010.0038
LEU 1020.0070
SER 1030.0072
ALA 1040.0193
ASP 1050.0277
GLY 1060.0307
SER 1070.0221
LYS 1080.0170
ARG 1090.0101
VAL 1100.0067
LEU 1110.0091
VAL 1120.0094
LEU 1130.0067
GLU 1140.0039
ALA 1150.0015
GLY 1160.0049
PRO 1170.0080
ASP 1180.0113
ASN 1190.0106
THR 1200.0120
SER 1210.0130
ARG 1220.0079
ASP 1230.0080
VAL 1240.0091
LYS 1250.0050
ILE 1260.0044
PRO 1270.0056
ALA 1280.0016
ALA 1290.0021
ILE 1300.0049
THR 1310.0050
ARG 1320.0037
LEU 1330.0058
PHE 1340.0072
ARG 1350.0073
SER 1360.0083
PRO 1370.0072
LEU 1380.0078
ASP 1390.0080
TRP 1400.0060
ASN 1410.0075
LEU 1420.0067
PHE 1430.0051
SER 1440.0064
GLU 1450.0076
LEU 1460.0114
GLN 1470.0086
GLU 1480.0089
GLN 1490.0070
LEU 1500.0088
ALA 1510.0116
GLU 1520.0105
ARG 1530.0112
GLN 1540.0116
ILE 1550.0028
TYR 1560.0014
MET 1570.0029
ALA 1580.0051
ARG 1590.0049
GLY 1600.0050
ARG 1610.0058
LEU 1620.0065
LEU 1630.0072
GLY 1640.0081
GLY 1650.0076
SER 1660.0078
SER 1670.0085
ALA 1680.0087
THR 1690.0088
ASN 1700.0071
ALA 1710.0062
THR 1720.0046
LEU 1730.0025
TYR 1740.0022
HISD 1750.0022
ARG 1760.0044
GLY 1770.0059
ALA 1780.0064
ALA 1790.0083
GLY 1800.0097
ASP 1810.0087
TYR 1820.0077
ASP 1830.0106
ALA 1840.0130
TRP 1850.0100
GLY 1860.0105
VAL 1870.0088
GLU 1880.0038
GLY 1890.0027
TRP 1900.0034
SER 1910.0064
SER 1920.0056
GLU 1930.0040
ASP 1940.0022
VAL 1950.0029
LEU 1960.0022
SER 1970.0040
TRP 1980.0045
PHE 1990.0058
VAL 2000.0102
GLN 2010.0076
ALA 2020.0069
GLU 2030.0097
THR 2040.0084
ASN 2050.0081
ALA 2060.0117
ASP 2070.0082
PHE 2080.0096
GLY 2090.0160
PRO 2100.0222
GLY 2110.0250
ALA 2120.0142
TYR 2130.0139
HISH 2140.0104
GLY 2150.0131
SER 2160.0138
GLY 2170.0104
GLY 2180.0055
PRO 2190.0036
MET 2200.0054
ARG 2210.0052
VAL 2220.0064
GLU 2230.0073
ASN 2240.0055
PRO 2250.0067
ARG 2260.0092
TYR 2270.0069
THR 2280.0066
ASN 2290.0064
LYS 2300.0015
GLN 2310.0040
LEU 2320.0028
HISE 2330.0030
THR 2340.0062
ALA 2350.0064
PHE 2360.0083
PHE 2370.0087
LYS 2380.0095
ALA 2390.0084
ALA 2400.0085
GLU 2410.0114
GLU 2420.0119
VAL 2430.0115
GLY 2440.0142
LEU 2450.0102
THR 2460.0178
PRO 2470.0252
ASN 2480.0211
SER 2490.0178
ASP 2500.0147
PHE 2510.0106
ASN 2520.0070
ASP 2530.0061
TRP 2540.0105
SER 2550.0142
HISE 2560.0184
ASP 2570.0135
HISE 2580.0136
ALA 2590.0147
GLY 2600.0130
TYR 2610.0143
GLY 2620.0168
THR 2630.0025
PHE 2640.0017
GLN 2650.0009
VAL 2660.0052
MET 2670.0048
GLN 2680.0053
ASP 2690.0079
LYS 2700.0143
GLY 2710.0088
THR 2720.0029
ARG 2730.0042
ALA 2740.0053
ASP 2750.0071
MET 2760.0062
TYR 2770.0069
ARG 2780.0071
GLN 2790.0051
TYR 2800.0062
LEU 2810.0064
LYS 2820.0107
PRO 2830.0139
VAL 2840.0097
LEU 2850.0082
GLY 2860.0084
ARG 2870.0057
ARG 2880.0100
ASN 2890.0125
LEU 2900.0069
GLN 2910.0108
VAL 2920.0116
LEU 2930.0106
THR 2940.0050
GLY 2950.0022
ALA 2960.0075
ALA 2970.0083
VAL 2980.0093
THR 2990.0083
LYS 3000.0087
VAL 3010.0096
ASN 3020.0070
ILE 3030.0033
ASP 3040.0057
GLN 3050.0128
ALA 3060.0122
ALA 3070.0124
GLY 3080.0217
LYS 3090.0159
ALA 3100.0085
GLN 3110.0064
ALA 3120.0056
LEU 3130.0064
GLY 3140.0118
VAL 3150.0084
GLU 3160.0088
PHE 3170.0169
SER 3180.0159
THR 3190.0144
ASP 3200.0241
GLY 3210.0363
PRO 3220.0393
THR 3230.0446
GLY 3240.0329
GLU 3250.0231
ARG 3260.0177
LEU 3270.0157
SER 3280.0176
ALA 3290.0067
GLU 3300.0037
LEU 3310.0040
ALA 3320.0080
PRO 3330.0093
GLY 3340.0204
GLY 3350.0088
GLU 3360.0078
VAL 3370.0074
ILE 3380.0064
MET 3390.0053
CYS 3400.0063
ALA 3410.0051
GLY 3420.0052
ALA 3430.0035
VAL 3440.0024
HISD 3450.0027
THR 3460.0010
PRO 3470.0026
PHE 3480.0040
LEU 3490.0041
LEU 3500.0036
LYS 3510.0040
HISE 3520.0048
SER 3530.0024
GLY 3540.0027
VAL 3550.0032
GLY 3560.0074
PRO 3570.0089
SER 3580.0112
ALA 3590.0167
GLU 3600.0116
LEU 3610.0085
LYS 3620.0130
GLU 3630.0143
PHE 3640.0087
GLY 3650.0088
ILE 3660.0059
PRO 3670.0072
VAL 3680.0076
VAL 3690.0064
SER 3700.0044
ASN 3710.0065
LEU 3720.0039
ALA 3730.0047
GLY 3740.0030
VAL 3750.0024
GLY 3760.0026
GLN 3770.0022
ASN 3780.0021
LEU 3790.0013
GLN 3800.0006
ASP 3810.0020
GLN 3820.0033
PRO 3830.0033
ALA 3840.0032
CYS 3850.0024
LEU 3860.0020
THR 3870.0016
ALA 3880.0021
ALA 3890.0024
PRO 3900.0046
VAL 3910.0068
LYS 3920.0139
GLU 3930.0118
LYS 3940.0143
TYR 3950.0114
ASP 3960.0115
GLY 3970.0119
ILE 3980.0070
ALA 3990.0057
ILE 4000.0054
SER 4010.0056
ASP 4020.0053
HISE 4030.0051
ILE 4040.0037
TYR 4050.0047
ASN 4060.0059
GLU 4070.0075
LYS 4080.0127
GLY 4090.0061
GLN 4100.0034
ILE 4110.0042
ARG 4120.0049
LYS 4130.0102
ARG 4140.0109
ALA 4150.0101
ILE 4160.0056
ALA 4170.0046
SER 4180.0045
TYR 4190.0049
LEU 4200.0141
LEU 4210.0187
GLY 4220.0106
GLY 4230.0104
ARG 4240.0116
GLY 4250.0083
GLY 4260.0074
LEU 4270.0063
THR 4280.0058
SER 4290.0054
THR 4300.0055
GLY 4310.0023
CYS 4320.0016
ASP 4330.0011
ARG 4340.0034
GLY 4350.0062
ALA 4360.0089
PHE 4370.0097
VAL 4380.0084
ARG 4390.0077
THR 4400.0123
ALA 4410.0165
GLY 4420.0163
GLN 4430.0163
ALA 4440.0099
LEU 4450.0120
PRO 4460.0104
ASP 4470.0109
LEU 4480.0106
GLN 4490.0072
VAL 4500.0062
ARG 4510.0051
PHE 4520.0035
VAL 4530.0015
PRO 4540.0020
GLY 4550.0045
MET 4560.0044
ALA 4570.0042
LEU 4580.0064
ASP 4590.0064
PRO 4600.0070
ASP 4610.0050
GLY 4620.0055
VAL 4630.0042
SER 4640.0061
THR 4650.0067
TYR 4660.0059
VAL 4670.0083
ARG 4680.0084
PHE 4690.0076
ALA 4700.0112
LYS 4710.0103
PHE 4720.0076
GLN 4730.0098
SER 4740.0119
GLN 4750.0116
GLY 4760.0069
LEU 4770.0044
LYS 4780.0055
TRP 4790.0055
PRO 4800.0056
SER 4810.0063
GLY 4820.0036
ILE 4830.0032
THR 4840.0022
MET 4850.0046
GLN 4860.0046
LEU 4870.0051
ILE 4880.0067
ALA 4890.0071
CYS 4900.0081
ARG 4910.0071
PRO 4920.0068
GLN 4930.0066
SER 4940.0035
THR 4950.0033
GLY 4960.0032
SER 4970.0034
VAL 4980.0036
GLY 4990.0049
LEU 5000.0046
LYS 5010.0044
SER 5020.0049
ALA 5030.0080
ASP 5040.0135
PRO 5050.0218
PHE 5060.0215
ALA 5070.0161
PRO 5080.0107
PRO 5090.0061
LYS 5100.0058
LEU 5110.0043
SER 5120.0050
PRO 5130.0047
GLY 5140.0047
TYR 5150.0038
LEU 5160.0034
THR 5170.0027
ASP 5180.0043
LYS 5190.0062
ASP 5200.0076
GLY 5210.0061
ALA 5220.0059
ASP 5230.0059
LEU 5240.0042
ALA 5250.0071
THR 5260.0093
LEU 5270.0055
ARG 5280.0046
LYS 5290.0071
GLY 5300.0064
ILE 5310.0038
HISE 5320.0058
TRP 5330.0079
ALA 5340.0062
ARG 5350.0061
ASP 5360.0093
VAL 5370.0089
ALA 5380.0087
ARG 5390.0097
SER 5400.0111
SER 5410.0135
ALA 5420.0082
LEU 5430.0085
SER 5440.0094
GLU 5450.0083
TYR 5460.0077
LEU 5470.0060
ASP 5480.0047
GLY 5490.0023
GLU 5500.0006
LEU 5510.0032
PHE 5520.0043
PRO 5530.0046
GLY 5540.0037
SER 5550.0139
GLY 5560.0068
VAL 5570.0095
VAL 5580.0100
SER 5590.0157
ASP 5600.0207
ASP 5610.0187
GLN 5620.0098
ILE 5630.0086
ASP 5640.0078
GLU 5650.0078
TYR 5660.0069
ILE 5670.0053
ARG 5680.0072
ARG 5690.0077
SER 5700.0062
ILE 5710.0064
HISD 5720.0044
SER 5730.0031
SER 5740.0030
ASN 5750.0022
ALA 5760.0023
ILE 5770.0022
THR 5780.0029
GLY 5790.0021
THR 5800.0013
CYS 5810.0039
LYS 5820.0050
MET 5830.0063
GLY 5840.0085
ASN 5850.0198
ALA 5860.0306
GLY 5870.0385
ASP 5880.0233
SER 5890.0146
SER 5900.0082
SER 5910.0063
VAL 5920.0027
VAL 5930.0058
ASP 5940.0065
ASN 5950.0055
GLN 5960.0038
LEU 5970.0044
ARG 5980.0061
VAL 5990.0032
HISE 6000.0040
GLY 6010.0058
VAL 6020.0074
GLU 6030.0115
GLY 6040.0122
LEU 6050.0049
ARG 6060.0051
VAL 6070.0050
VAL 6080.0064
ASP 6090.0063
ALA 6100.0061
SER 6110.0045
VAL 6120.0052
VAL 6130.0046
PRO 6140.0069
LYS 6150.0048
ILE 6160.0031
PRO 6170.0037
GLY 6180.0053
GLY 6190.0052
GLN 6200.0042
THR 6210.0036
GLY 6220.0046
ALA 6230.0030
PRO 6240.0026
VAL 6250.0039
VAL 6260.0048
MET 6270.0030
ILE 6280.0037
ALA 6290.0046
GLU 6300.0025
ARG 6310.0023
ALA 6320.0064
ALA 6330.0046
ALA 6340.0057
LEU 6350.0046
LEU 6360.0060
THR 6370.0049
GLY 6380.0078
LYS 6390.0123
ALA 6400.0099
THR 6410.0155
ILE 6420.0144
GLY 6430.0188
ALA 6440.0754
SER 6450.0215
ALA 6460.0268
ALA 6470.0178
ALA 6480.0284
PRO 6490.0179

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.