CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 90  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0772
SER 770.0457
PRO 780.0269
VAL 790.0139
ALA 800.0279
GLY 810.0364
GLN 820.0274
LYS 830.0112
TYR 840.0013
ASP 850.0039
TYR 860.0032
ILE 870.0030
LEU 880.0031
VAL 890.0023
GLY 900.0035
GLY 910.0051
GLY 920.0054
THR 930.0050
ALA 940.0046
ALA 950.0043
CYS 960.0048
VAL 970.0047
LEU 980.0027
ALA 990.0042
ASN 1000.0033
ARG 1010.0040
LEU 1020.0048
SER 1030.0047
ALA 1040.0052
ASP 1050.0069
GLY 1060.0092
SER 1070.0081
LYS 1080.0039
ARG 1090.0062
VAL 1100.0051
LEU 1110.0043
VAL 1120.0042
LEU 1130.0017
GLU 1140.0045
ALA 1150.0062
GLY 1160.0099
PRO 1170.0097
ASP 1180.0090
ASN 1190.0107
THR 1200.0146
SER 1210.0185
ARG 1220.0194
ASP 1230.0171
VAL 1240.0095
LYS 1250.0078
ILE 1260.0100
PRO 1270.0109
ALA 1280.0086
ALA 1290.0092
ILE 1300.0100
THR 1310.0098
ARG 1320.0100
LEU 1330.0106
PHE 1340.0048
ARG 1350.0031
SER 1360.0070
PRO 1370.0146
LEU 1380.0056
ASP 1390.0042
TRP 1400.0077
ASN 1410.0064
LEU 1420.0085
PHE 1430.0096
SER 1440.0081
GLU 1450.0078
LEU 1460.0077
GLN 1470.0061
GLU 1480.0059
GLN 1490.0036
LEU 1500.0038
ALA 1510.0045
GLU 1520.0071
ARG 1530.0073
GLN 1540.0072
ILE 1550.0080
TYR 1560.0070
MET 1570.0066
ALA 1580.0071
ARG 1590.0067
GLY 1600.0051
ARG 1610.0078
LEU 1620.0060
LEU 1630.0058
GLY 1640.0055
GLY 1650.0064
SER 1660.0071
SER 1670.0076
ALA 1680.0043
THR 1690.0063
ASN 1700.0072
ALA 1710.0078
THR 1720.0081
LEU 1730.0032
TYR 1740.0026
HISD 1750.0024
ARG 1760.0037
GLY 1770.0037
ALA 1780.0049
ALA 1790.0077
GLY 1800.0070
ASP 1810.0045
TYR 1820.0047
ASP 1830.0080
ALA 1840.0088
TRP 1850.0113
GLY 1860.0120
VAL 1870.0081
GLU 1880.0088
GLY 1890.0046
TRP 1900.0032
SER 1910.0085
SER 1920.0068
GLU 1930.0104
ASP 1940.0072
VAL 1950.0060
LEU 1960.0068
SER 1970.0046
TRP 1980.0028
PHE 1990.0027
VAL 2000.0036
GLN 2010.0029
ALA 2020.0044
GLU 2030.0043
THR 2040.0034
ASN 2050.0022
ALA 2060.0173
ASP 2070.0191
PHE 2080.0123
GLY 2090.0073
PRO 2100.0108
GLY 2110.0173
ALA 2120.0112
TYR 2130.0059
HISH 2140.0044
GLY 2150.0056
SER 2160.0060
GLY 2170.0049
GLY 2180.0062
PRO 2190.0069
MET 2200.0069
ARG 2210.0077
VAL 2220.0062
GLU 2230.0065
ASN 2240.0045
PRO 2250.0056
ARG 2260.0067
TYR 2270.0053
THR 2280.0051
ASN 2290.0051
LYS 2300.0054
GLN 2310.0049
LEU 2320.0047
HISE 2330.0031
THR 2340.0053
ALA 2350.0055
PHE 2360.0071
PHE 2370.0081
LYS 2380.0114
ALA 2390.0108
ALA 2400.0096
GLU 2410.0131
GLU 2420.0132
VAL 2430.0122
GLY 2440.0156
LEU 2450.0199
THR 2460.0247
PRO 2470.0226
ASN 2480.0104
SER 2490.0129
ASP 2500.0098
PHE 2510.0060
ASN 2520.0091
ASP 2530.0128
TRP 2540.0146
SER 2550.0195
HISE 2560.0165
ASP 2570.0065
HISE 2580.0060
ALA 2590.0078
GLY 2600.0107
TYR 2610.0079
GLY 2620.0079
THR 2630.0030
PHE 2640.0025
GLN 2650.0016
VAL 2660.0063
MET 2670.0068
GLN 2680.0078
ASP 2690.0098
LYS 2700.0124
GLY 2710.0106
THR 2720.0083
ARG 2730.0079
ALA 2740.0086
ASP 2750.0065
MET 2760.0072
TYR 2770.0062
ARG 2780.0065
GLN 2790.0079
TYR 2800.0077
LEU 2810.0074
LYS 2820.0130
PRO 2830.0170
VAL 2840.0082
LEU 2850.0081
GLY 2860.0078
ARG 2870.0093
ARG 2880.0151
ASN 2890.0160
LEU 2900.0042
GLN 2910.0057
VAL 2920.0060
LEU 2930.0020
THR 2940.0043
GLY 2950.0046
ALA 2960.0034
ALA 2970.0046
VAL 2980.0044
THR 2990.0077
LYS 3000.0059
VAL 3010.0047
ASN 3020.0042
ILE 3030.0037
ASP 3040.0030
GLN 3050.0091
ALA 3060.0124
ALA 3070.0103
GLY 3080.0290
LYS 3090.0157
ALA 3100.0051
GLN 3110.0045
ALA 3120.0043
LEU 3130.0018
GLY 3140.0039
VAL 3150.0026
GLU 3160.0051
PHE 3170.0072
SER 3180.0076
THR 3190.0075
ASP 3200.0067
GLY 3210.0117
PRO 3220.0096
THR 3230.0225
GLY 3240.0081
GLU 3250.0114
ARG 3260.0078
LEU 3270.0020
SER 3280.0019
ALA 3290.0041
GLU 3300.0052
LEU 3310.0026
ALA 3320.0136
PRO 3330.0270
GLY 3340.0328
GLY 3350.0070
GLU 3360.0052
VAL 3370.0027
ILE 3380.0017
MET 3390.0013
CYS 3400.0018
ALA 3410.0007
GLY 3420.0017
ALA 3430.0032
VAL 3440.0038
HISD 3450.0035
THR 3460.0020
PRO 3470.0019
PHE 3480.0028
LEU 3490.0040
LEU 3500.0054
LYS 3510.0051
HISE 3520.0054
SER 3530.0076
GLY 3540.0057
VAL 3550.0055
GLY 3560.0071
PRO 3570.0042
SER 3580.0059
ALA 3590.0067
GLU 3600.0057
LEU 3610.0093
LYS 3620.0148
GLU 3630.0127
PHE 3640.0196
GLY 3650.0217
ILE 3660.0194
PRO 3670.0202
VAL 3680.0098
VAL 3690.0039
SER 3700.0026
ASN 3710.0044
LEU 3720.0066
ALA 3730.0059
GLY 3740.0055
VAL 3750.0052
GLY 3760.0038
GLN 3770.0056
ASN 3780.0053
LEU 3790.0043
GLN 3800.0048
ASP 3810.0049
GLN 3820.0036
PRO 3830.0024
ALA 3840.0019
CYS 3850.0011
LEU 3860.0047
THR 3870.0051
ALA 3880.0043
ALA 3890.0031
PRO 3900.0050
VAL 3910.0065
LYS 3920.0156
GLU 3930.0084
LYS 3940.0116
TYR 3950.0063
ASP 3960.0040
GLY 3970.0061
ILE 3980.0051
ALA 3990.0048
ILE 4000.0046
SER 4010.0068
ASP 4020.0056
HISE 4030.0057
ILE 4040.0091
TYR 4050.0087
ASN 4060.0092
GLU 4070.0056
LYS 4080.0092
GLY 4090.0100
GLN 4100.0097
ILE 4110.0119
ARG 4120.0125
LYS 4130.0116
ARG 4140.0073
ALA 4150.0150
ILE 4160.0130
ALA 4170.0083
SER 4180.0088
TYR 4190.0066
LEU 4200.0088
LEU 4210.0120
GLY 4220.0038
GLY 4230.0069
ARG 4240.0086
GLY 4250.0070
GLY 4260.0077
LEU 4270.0065
THR 4280.0031
SER 4290.0021
THR 4300.0029
GLY 4310.0011
CYS 4320.0014
ASP 4330.0024
ARG 4340.0022
GLY 4350.0026
ALA 4360.0032
PHE 4370.0064
VAL 4380.0067
ARG 4390.0058
THR 4400.0041
ALA 4410.0042
GLY 4420.0061
GLN 4430.0086
ALA 4440.0077
LEU 4450.0068
PRO 4460.0059
ASP 4470.0053
LEU 4480.0050
GLN 4490.0038
VAL 4500.0030
ARG 4510.0029
PHE 4520.0006
VAL 4530.0008
PRO 4540.0014
GLY 4550.0020
MET 4560.0019
ALA 4570.0029
LEU 4580.0029
ASP 4590.0039
PRO 4600.0044
ASP 4610.0038
GLY 4620.0053
VAL 4630.0057
SER 4640.0036
THR 4650.0038
TYR 4660.0047
VAL 4670.0027
ARG 4680.0024
PHE 4690.0018
ALA 4700.0012
LYS 4710.0018
PHE 4720.0022
GLN 4730.0025
SER 4740.0013
GLN 4750.0026
GLY 4760.0050
LEU 4770.0042
LYS 4780.0034
TRP 4790.0035
PRO 4800.0040
SER 4810.0040
GLY 4820.0027
ILE 4830.0013
THR 4840.0015
MET 4850.0024
GLN 4860.0017
LEU 4870.0013
ILE 4880.0042
ALA 4890.0036
CYS 4900.0039
ARG 4910.0021
PRO 4920.0014
GLN 4930.0040
SER 4940.0028
THR 4950.0042
GLY 4960.0052
SER 4970.0030
VAL 4980.0018
GLY 4990.0022
LEU 5000.0060
LYS 5010.0058
SER 5020.0040
ALA 5030.0101
ASP 5040.0063
PRO 5050.0140
PHE 5060.0146
ALA 5070.0101
PRO 5080.0109
PRO 5090.0043
LYS 5100.0045
LEU 5110.0041
SER 5120.0055
PRO 5130.0053
GLY 5140.0058
TYR 5150.0021
LEU 5160.0019
THR 5170.0033
ASP 5180.0147
LYS 5190.0043
ASP 5200.0088
GLY 5210.0108
ALA 5220.0095
ASP 5230.0061
LEU 5240.0049
ALA 5250.0065
THR 5260.0059
LEU 5270.0049
ARG 5280.0067
LYS 5290.0071
GLY 5300.0079
ILE 5310.0082
HISE 5320.0087
TRP 5330.0078
ALA 5340.0088
ARG 5350.0112
ASP 5360.0122
VAL 5370.0097
ALA 5380.0095
ARG 5390.0146
SER 5400.0136
SER 5410.0141
ALA 5420.0058
LEU 5430.0050
SER 5440.0066
GLU 5450.0102
TYR 5460.0076
LEU 5470.0070
ASP 5480.0090
GLY 5490.0044
GLU 5500.0073
LEU 5510.0062
PHE 5520.0088
PRO 5530.0106
GLY 5540.0081
SER 5550.0100
GLY 5560.0122
VAL 5570.0107
VAL 5580.0027
SER 5590.0038
ASP 5600.0079
ASP 5610.0087
GLN 5620.0091
ILE 5630.0080
ASP 5640.0074
GLU 5650.0106
TYR 5660.0067
ILE 5670.0050
ARG 5680.0046
ARG 5690.0019
SER 5700.0019
ILE 5710.0018
HISD 5720.0042
SER 5730.0052
SER 5740.0059
ASN 5750.0065
ALA 5760.0063
ILE 5770.0063
THR 5780.0040
GLY 5790.0045
THR 5800.0044
CYS 5810.0051
LYS 5820.0039
MET 5830.0029
GLY 5840.0068
ASN 5850.0482
ALA 5860.0772
GLY 5870.0469
ASP 5880.0270
SER 5890.0283
SER 5900.0130
SER 5910.0062
VAL 5920.0060
VAL 5930.0080
ASP 5940.0088
ASN 5950.0095
GLN 5960.0091
LEU 5970.0085
ARG 5980.0122
VAL 5990.0036
HISE 6000.0035
GLY 6010.0066
VAL 6020.0066
GLU 6030.0059
GLY 6040.0036
LEU 6050.0013
ARG 6060.0023
VAL 6070.0029
VAL 6080.0010
ASP 6090.0014
ALA 6100.0022
SER 6110.0036
VAL 6120.0025
VAL 6130.0031
PRO 6140.0068
LYS 6150.0049
ILE 6160.0033
PRO 6170.0009
GLY 6180.0026
GLY 6190.0053
GLN 6200.0046
THR 6210.0044
GLY 6220.0050
ALA 6230.0025
PRO 6240.0020
VAL 6250.0022
VAL 6260.0022
MET 6270.0011
ILE 6280.0025
ALA 6290.0015
GLU 6300.0027
ARG 6310.0049
ALA 6320.0035
ALA 6330.0059
ALA 6340.0110
LEU 6350.0091
LEU 6360.0069
THR 6370.0153
GLY 6380.0234
LYS 6390.0366
ALA 6400.0351
THR 6410.0227
ILE 6420.0225
GLY 6430.0380
ALA 6440.0378
SER 6450.0102
ALA 6460.0151
ALA 6470.0137
ALA 6480.0136
PRO 6490.0129

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.