CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 91  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0813
SER 770.0176
PRO 780.0143
VAL 790.0059
ALA 800.0088
GLY 810.0037
GLN 820.0034
LYS 830.0056
TYR 840.0066
ASP 850.0074
TYR 860.0056
ILE 870.0047
LEU 880.0054
VAL 890.0032
GLY 900.0040
GLY 910.0052
GLY 920.0049
THR 930.0043
ALA 940.0052
ALA 950.0050
CYS 960.0028
VAL 970.0030
LEU 980.0046
ALA 990.0056
ASN 1000.0055
ARG 1010.0048
LEU 1020.0072
SER 1030.0085
ALA 1040.0117
ASP 1050.0128
GLY 1060.0117
SER 1070.0122
LYS 1080.0108
ARG 1090.0097
VAL 1100.0048
LEU 1110.0039
VAL 1120.0047
LEU 1130.0025
GLU 1140.0037
ALA 1150.0041
GLY 1160.0098
PRO 1170.0114
ASP 1180.0127
ASN 1190.0106
THR 1200.0121
SER 1210.0098
ARG 1220.0049
ASP 1230.0059
VAL 1240.0050
LYS 1250.0019
ILE 1260.0032
PRO 1270.0043
ALA 1280.0059
ALA 1290.0056
ILE 1300.0058
THR 1310.0070
ARG 1320.0046
LEU 1330.0050
PHE 1340.0069
ARG 1350.0115
SER 1360.0113
PRO 1370.0153
LEU 1380.0102
ASP 1390.0054
TRP 1400.0086
ASN 1410.0084
LEU 1420.0058
PHE 1430.0100
SER 1440.0098
GLU 1450.0095
LEU 1460.0115
GLN 1470.0080
GLU 1480.0142
GLN 1490.0047
LEU 1500.0074
ALA 1510.0099
GLU 1520.0112
ARG 1530.0074
GLN 1540.0117
ILE 1550.0122
TYR 1560.0106
MET 1570.0094
ALA 1580.0043
ARG 1590.0032
GLY 1600.0064
ARG 1610.0087
LEU 1620.0085
LEU 1630.0085
GLY 1640.0068
GLY 1650.0065
SER 1660.0053
SER 1670.0041
ALA 1680.0038
THR 1690.0035
ASN 1700.0037
ALA 1710.0035
THR 1720.0029
LEU 1730.0054
TYR 1740.0051
HISD 1750.0040
ARG 1760.0019
GLY 1770.0009
ALA 1780.0023
ALA 1790.0029
GLY 1800.0031
ASP 1810.0036
TYR 1820.0042
ASP 1830.0043
ALA 1840.0045
TRP 1850.0016
GLY 1860.0026
VAL 1870.0037
GLU 1880.0057
GLY 1890.0059
TRP 1900.0066
SER 1910.0061
SER 1920.0062
GLU 1930.0056
ASP 1940.0057
VAL 1950.0066
LEU 1960.0080
SER 1970.0081
TRP 1980.0068
PHE 1990.0061
VAL 2000.0099
GLN 2010.0107
ALA 2020.0117
GLU 2030.0142
THR 2040.0115
ASN 2050.0104
ALA 2060.0150
ASP 2070.0222
PHE 2080.0217
GLY 2090.0089
PRO 2100.0069
GLY 2110.0123
ALA 2120.0078
TYR 2130.0103
HISH 2140.0103
GLY 2150.0108
SER 2160.0095
GLY 2170.0112
GLY 2180.0121
PRO 2190.0106
MET 2200.0100
ARG 2210.0066
VAL 2220.0084
GLU 2230.0087
ASN 2240.0094
PRO 2250.0081
ARG 2260.0070
TYR 2270.0028
THR 2280.0021
ASN 2290.0012
LYS 2300.0076
GLN 2310.0047
LEU 2320.0040
HISE 2330.0027
THR 2340.0065
ALA 2350.0082
PHE 2360.0076
PHE 2370.0086
LYS 2380.0156
ALA 2390.0139
ALA 2400.0090
GLU 2410.0159
GLU 2420.0212
VAL 2430.0158
GLY 2440.0114
LEU 2450.0041
THR 2460.0064
PRO 2470.0066
ASN 2480.0078
SER 2490.0110
ASP 2500.0089
PHE 2510.0038
ASN 2520.0072
ASP 2530.0117
TRP 2540.0102
SER 2550.0170
HISE 2560.0200
ASP 2570.0061
HISE 2580.0030
ALA 2590.0031
GLY 2600.0044
TYR 2610.0026
GLY 2620.0058
THR 2630.0056
PHE 2640.0056
GLN 2650.0076
VAL 2660.0060
MET 2670.0050
GLN 2680.0041
ASP 2690.0037
LYS 2700.0131
GLY 2710.0047
THR 2720.0013
ARG 2730.0016
ALA 2740.0039
ASP 2750.0040
MET 2760.0039
TYR 2770.0025
ARG 2780.0056
GLN 2790.0060
TYR 2800.0055
LEU 2810.0036
LYS 2820.0062
PRO 2830.0100
VAL 2840.0069
LEU 2850.0067
GLY 2860.0074
ARG 2870.0084
ARG 2880.0076
ASN 2890.0058
LEU 2900.0037
GLN 2910.0025
VAL 2920.0034
LEU 2930.0040
THR 2940.0042
GLY 2950.0047
ALA 2960.0059
ALA 2970.0062
VAL 2980.0049
THR 2990.0070
LYS 3000.0026
VAL 3010.0036
ASN 3020.0073
ILE 3030.0089
ASP 3040.0104
GLN 3050.0174
ALA 3060.0111
ALA 3070.0109
GLY 3080.0103
LYS 3090.0028
ALA 3100.0083
GLN 3110.0082
ALA 3120.0077
LEU 3130.0078
GLY 3140.0065
VAL 3150.0038
GLU 3160.0052
PHE 3170.0097
SER 3180.0106
THR 3190.0109
ASP 3200.0160
GLY 3210.0170
PRO 3220.0112
THR 3230.0251
GLY 3240.0115
GLU 3250.0119
ARG 3260.0087
LEU 3270.0070
SER 3280.0070
ALA 3290.0048
GLU 3300.0055
LEU 3310.0058
ALA 3320.0086
PRO 3330.0138
GLY 3340.0092
GLY 3350.0036
GLU 3360.0032
VAL 3370.0042
ILE 3380.0031
MET 3390.0039
CYS 3400.0049
ALA 3410.0063
GLY 3420.0046
ALA 3430.0044
VAL 3440.0064
HISD 3450.0071
THR 3460.0075
PRO 3470.0083
PHE 3480.0073
LEU 3490.0079
LEU 3500.0088
LYS 3510.0084
HISE 3520.0065
SER 3530.0084
GLY 3540.0107
VAL 3550.0126
GLY 3560.0169
PRO 3570.0207
SER 3580.0197
ALA 3590.0195
GLU 3600.0176
LEU 3610.0126
LYS 3620.0143
GLU 3630.0151
PHE 3640.0115
GLY 3650.0122
ILE 3660.0123
PRO 3670.0212
VAL 3680.0187
VAL 3690.0163
SER 3700.0164
ASN 3710.0120
LEU 3720.0095
ALA 3730.0128
GLY 3740.0056
VAL 3750.0054
GLY 3760.0037
GLN 3770.0032
ASN 3780.0059
LEU 3790.0063
GLN 3800.0070
ASP 3810.0070
GLN 3820.0066
PRO 3830.0047
ALA 3840.0047
CYS 3850.0032
LEU 3860.0030
THR 3870.0060
ALA 3880.0063
ALA 3890.0063
PRO 3900.0050
VAL 3910.0051
LYS 3920.0078
GLU 3930.0046
LYS 3940.0072
TYR 3950.0040
ASP 3960.0058
GLY 3970.0086
ILE 3980.0050
ALA 3990.0035
ILE 4000.0025
SER 4010.0035
ASP 4020.0030
HISE 4030.0033
ILE 4040.0035
TYR 4050.0030
ASN 4060.0025
GLU 4070.0034
LYS 4080.0076
GLY 4090.0100
GLN 4100.0045
ILE 4110.0052
ARG 4120.0053
LYS 4130.0097
ARG 4140.0116
ALA 4150.0124
ILE 4160.0075
ALA 4170.0055
SER 4180.0046
TYR 4190.0038
LEU 4200.0065
LEU 4210.0060
GLY 4220.0060
GLY 4230.0055
ARG 4240.0058
GLY 4250.0025
GLY 4260.0021
LEU 4270.0023
THR 4280.0052
SER 4290.0057
THR 4300.0060
GLY 4310.0048
CYS 4320.0050
ASP 4330.0049
ARG 4340.0028
GLY 4350.0033
ALA 4360.0035
PHE 4370.0059
VAL 4380.0068
ARG 4390.0076
THR 4400.0143
ALA 4410.0128
GLY 4420.0075
GLN 4430.0132
ALA 4440.0062
LEU 4450.0035
PRO 4460.0054
ASP 4470.0053
LEU 4480.0052
GLN 4490.0041
VAL 4500.0045
ARG 4510.0051
PHE 4520.0053
VAL 4530.0050
PRO 4540.0045
GLY 4550.0040
MET 4560.0025
ALA 4570.0010
LEU 4580.0057
ASP 4590.0085
PRO 4600.0057
ASP 4610.0103
GLY 4620.0109
VAL 4630.0140
SER 4640.0123
THR 4650.0080
TYR 4660.0091
VAL 4670.0088
ARG 4680.0058
PHE 4690.0042
ALA 4700.0061
LYS 4710.0052
PHE 4720.0072
GLN 4730.0097
SER 4740.0093
GLN 4750.0092
GLY 4760.0108
LEU 4770.0087
LYS 4780.0075
TRP 4790.0044
PRO 4800.0052
SER 4810.0053
GLY 4820.0042
ILE 4830.0048
THR 4840.0050
MET 4850.0044
GLN 4860.0041
LEU 4870.0039
ILE 4880.0023
ALA 4890.0030
CYS 4900.0033
ARG 4910.0053
PRO 4920.0066
GLN 4930.0080
SER 4940.0067
THR 4950.0072
GLY 4960.0082
SER 4970.0038
VAL 4980.0034
GLY 4990.0065
LEU 5000.0110
LYS 5010.0122
SER 5020.0133
ALA 5030.0168
ASP 5040.0186
PRO 5050.0187
PHE 5060.0188
ALA 5070.0190
PRO 5080.0204
PRO 5090.0139
LYS 5100.0084
LEU 5110.0046
SER 5120.0063
PRO 5130.0076
GLY 5140.0078
TYR 5150.0055
LEU 5160.0042
THR 5170.0044
ASP 5180.0099
LYS 5190.0022
ASP 5200.0125
GLY 5210.0106
ALA 5220.0085
ASP 5230.0080
LEU 5240.0102
ALA 5250.0111
THR 5260.0090
LEU 5270.0081
ARG 5280.0132
LYS 5290.0135
GLY 5300.0094
ILE 5310.0090
HISE 5320.0111
TRP 5330.0079
ALA 5340.0055
ARG 5350.0060
ASP 5360.0076
VAL 5370.0066
ALA 5380.0069
ARG 5390.0101
SER 5400.0100
SER 5410.0124
ALA 5420.0093
LEU 5430.0070
SER 5440.0092
GLU 5450.0059
TYR 5460.0049
LEU 5470.0044
ASP 5480.0065
GLY 5490.0074
GLU 5500.0083
LEU 5510.0133
PHE 5520.0107
PRO 5530.0137
GLY 5540.0159
SER 5550.0190
GLY 5560.0219
VAL 5570.0193
VAL 5580.0078
SER 5590.0127
ASP 5600.0217
ASP 5610.0173
GLN 5620.0122
ILE 5630.0144
ASP 5640.0129
GLU 5650.0133
TYR 5660.0111
ILE 5670.0084
ARG 5680.0065
ARG 5690.0104
SER 5700.0060
ILE 5710.0056
HISD 5720.0093
SER 5730.0096
SER 5740.0094
ASN 5750.0094
ALA 5760.0089
ILE 5770.0067
THR 5780.0064
GLY 5790.0067
THR 5800.0053
CYS 5810.0043
LYS 5820.0079
MET 5830.0091
GLY 5840.0123
ASN 5850.0444
ALA 5860.0813
GLY 5870.0287
ASP 5880.0258
SER 5890.0391
SER 5900.0205
SER 5910.0135
VAL 5920.0050
VAL 5930.0061
ASP 5940.0109
ASN 5950.0139
GLN 5960.0126
LEU 5970.0079
ARG 5980.0094
VAL 5990.0010
HISE 6000.0036
GLY 6010.0029
VAL 6020.0058
GLU 6030.0043
GLY 6040.0042
LEU 6050.0031
ARG 6060.0021
VAL 6070.0021
VAL 6080.0054
ASP 6090.0043
ALA 6100.0044
SER 6110.0054
VAL 6120.0067
VAL 6130.0074
PRO 6140.0078
LYS 6150.0079
ILE 6160.0073
PRO 6170.0039
GLY 6180.0044
GLY 6190.0036
GLN 6200.0041
THR 6210.0031
GLY 6220.0021
ALA 6230.0026
PRO 6240.0032
VAL 6250.0028
VAL 6260.0055
MET 6270.0060
ILE 6280.0063
ALA 6290.0062
GLU 6300.0056
ARG 6310.0078
ALA 6320.0083
ALA 6330.0060
ALA 6340.0074
LEU 6350.0101
LEU 6360.0083
THR 6370.0061
GLY 6380.0119
LYS 6390.0058
ALA 6400.0183
THR 6410.0368
ILE 6420.0233
GLY 6430.0266
ALA 6440.0247
SER 6450.0080
ALA 6460.0117
ALA 6470.0144
ALA 6480.0146
PRO 6490.0124

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.