CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 94  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0474
SER 770.0084
PRO 780.0059
VAL 790.0043
ALA 800.0175
GLY 810.0241
GLN 820.0197
LYS 830.0084
TYR 840.0067
ASP 850.0079
TYR 860.0042
ILE 870.0042
LEU 880.0051
VAL 890.0041
GLY 900.0041
GLY 910.0049
GLY 920.0056
THR 930.0056
ALA 940.0056
ALA 950.0055
CYS 960.0054
VAL 970.0056
LEU 980.0045
ALA 990.0041
ASN 1000.0054
ARG 1010.0036
LEU 1020.0036
SER 1030.0037
ALA 1040.0055
ASP 1050.0054
GLY 1060.0060
SER 1070.0077
LYS 1080.0043
ARG 1090.0058
VAL 1100.0053
LEU 1110.0055
VAL 1120.0057
LEU 1130.0046
GLU 1140.0037
ALA 1150.0025
GLY 1160.0045
PRO 1170.0035
ASP 1180.0036
ASN 1190.0031
THR 1200.0045
SER 1210.0085
ARG 1220.0101
ASP 1230.0119
VAL 1240.0073
LYS 1250.0039
ILE 1260.0044
PRO 1270.0063
ALA 1280.0048
ALA 1290.0049
ILE 1300.0046
THR 1310.0037
ARG 1320.0048
LEU 1330.0051
PHE 1340.0057
ARG 1350.0053
SER 1360.0082
PRO 1370.0093
LEU 1380.0077
ASP 1390.0069
TRP 1400.0065
ASN 1410.0050
LEU 1420.0067
PHE 1430.0142
SER 1440.0142
GLU 1450.0181
LEU 1460.0215
GLN 1470.0043
GLU 1480.0018
GLN 1490.0185
LEU 1500.0153
ALA 1510.0181
GLU 1520.0131
ARG 1530.0147
GLN 1540.0173
ILE 1550.0058
TYR 1560.0040
MET 1570.0037
ALA 1580.0043
ARG 1590.0058
GLY 1600.0075
ARG 1610.0071
LEU 1620.0049
LEU 1630.0041
GLY 1640.0045
GLY 1650.0052
SER 1660.0059
SER 1670.0054
ALA 1680.0050
THR 1690.0055
ASN 1700.0022
ALA 1710.0026
THR 1720.0029
LEU 1730.0009
TYR 1740.0011
HISD 1750.0026
ARG 1760.0073
GLY 1770.0094
ALA 1780.0107
ALA 1790.0125
GLY 1800.0126
ASP 1810.0133
TYR 1820.0088
ASP 1830.0086
ALA 1840.0110
TRP 1850.0033
GLY 1860.0030
VAL 1870.0069
GLU 1880.0099
GLY 1890.0075
TRP 1900.0070
SER 1910.0056
SER 1920.0053
GLU 1930.0056
ASP 1940.0050
VAL 1950.0032
LEU 1960.0024
SER 1970.0040
TRP 1980.0026
PHE 1990.0011
VAL 2000.0052
GLN 2010.0060
ALA 2020.0051
GLU 2030.0072
THR 2040.0063
ASN 2050.0061
ALA 2060.0092
ASP 2070.0153
PHE 2080.0137
GLY 2090.0102
PRO 2100.0056
GLY 2110.0069
ALA 2120.0076
TYR 2130.0086
HISH 2140.0053
GLY 2150.0058
SER 2160.0059
GLY 2170.0075
GLY 2180.0075
PRO 2190.0078
MET 2200.0062
ARG 2210.0067
VAL 2220.0056
GLU 2230.0061
ASN 2240.0038
PRO 2250.0044
ARG 2260.0097
TYR 2270.0158
THR 2280.0145
ASN 2290.0118
LYS 2300.0226
GLN 2310.0218
LEU 2320.0096
HISE 2330.0021
THR 2340.0083
ALA 2350.0087
PHE 2360.0065
PHE 2370.0133
LYS 2380.0200
ALA 2390.0152
ALA 2400.0099
GLU 2410.0200
GLU 2420.0265
VAL 2430.0172
GLY 2440.0116
LEU 2450.0024
THR 2460.0060
PRO 2470.0098
ASN 2480.0023
SER 2490.0021
ASP 2500.0029
PHE 2510.0038
ASN 2520.0072
ASP 2530.0091
TRP 2540.0130
SER 2550.0140
HISE 2560.0117
ASP 2570.0103
HISE 2580.0092
ALA 2590.0078
GLY 2600.0055
TYR 2610.0046
GLY 2620.0108
THR 2630.0014
PHE 2640.0019
GLN 2650.0031
VAL 2660.0021
MET 2670.0021
GLN 2680.0025
ASP 2690.0036
LYS 2700.0058
GLY 2710.0060
THR 2720.0036
ARG 2730.0039
ALA 2740.0045
ASP 2750.0057
MET 2760.0058
TYR 2770.0056
ARG 2780.0066
GLN 2790.0062
TYR 2800.0062
LEU 2810.0062
LYS 2820.0095
PRO 2830.0134
VAL 2840.0088
LEU 2850.0087
GLY 2860.0112
ARG 2870.0014
ARG 2880.0067
ASN 2890.0077
LEU 2900.0062
GLN 2910.0070
VAL 2920.0067
LEU 2930.0063
THR 2940.0051
GLY 2950.0043
ALA 2960.0034
ALA 2970.0038
VAL 2980.0043
THR 2990.0058
LYS 3000.0032
VAL 3010.0022
ASN 3020.0074
ILE 3030.0117
ASP 3040.0203
GLN 3050.0189
ALA 3060.0208
ALA 3070.0424
GLY 3080.0169
LYS 3090.0190
ALA 3100.0175
GLN 3110.0140
ALA 3120.0112
LEU 3130.0130
GLY 3140.0030
VAL 3150.0026
GLU 3160.0044
PHE 3170.0086
SER 3180.0090
THR 3190.0075
ASP 3200.0121
GLY 3210.0202
PRO 3220.0178
THR 3230.0129
GLY 3240.0093
GLU 3250.0059
ARG 3260.0114
LEU 3270.0068
SER 3280.0068
ALA 3290.0048
GLU 3300.0069
LEU 3310.0086
ALA 3320.0125
PRO 3330.0256
GLY 3340.0192
GLY 3350.0084
GLU 3360.0057
VAL 3370.0039
ILE 3380.0039
MET 3390.0051
CYS 3400.0070
ALA 3410.0076
GLY 3420.0066
ALA 3430.0053
VAL 3440.0073
HISD 3450.0085
THR 3460.0072
PRO 3470.0061
PHE 3480.0062
LEU 3490.0063
LEU 3500.0056
LYS 3510.0041
HISE 3520.0038
SER 3530.0088
GLY 3540.0093
VAL 3550.0106
GLY 3560.0079
PRO 3570.0044
SER 3580.0071
ALA 3590.0139
GLU 3600.0094
LEU 3610.0041
LYS 3620.0080
GLU 3630.0130
PHE 3640.0126
GLY 3650.0066
ILE 3660.0085
PRO 3670.0115
VAL 3680.0089
VAL 3690.0129
SER 3700.0148
ASN 3710.0096
LEU 3720.0081
ALA 3730.0033
GLY 3740.0042
VAL 3750.0045
GLY 3760.0043
GLN 3770.0039
ASN 3780.0059
LEU 3790.0037
GLN 3800.0078
ASP 3810.0060
GLN 3820.0061
PRO 3830.0047
ALA 3840.0006
CYS 3850.0037
LEU 3860.0075
THR 3870.0095
ALA 3880.0102
ALA 3890.0081
PRO 3900.0075
VAL 3910.0067
LYS 3920.0080
GLU 3930.0092
LYS 3940.0070
TYR 3950.0061
ASP 3960.0057
GLY 3970.0050
ILE 3980.0046
ALA 3990.0019
ILE 4000.0034
SER 4010.0034
ASP 4020.0024
HISE 4030.0025
ILE 4040.0031
TYR 4050.0039
ASN 4060.0064
GLU 4070.0066
LYS 4080.0088
GLY 4090.0032
GLN 4100.0048
ILE 4110.0043
ARG 4120.0050
LYS 4130.0039
ARG 4140.0033
ALA 4150.0044
ILE 4160.0032
ALA 4170.0051
SER 4180.0062
TYR 4190.0052
LEU 4200.0023
LEU 4210.0075
GLY 4220.0178
GLY 4230.0168
ARG 4240.0113
GLY 4250.0075
GLY 4260.0066
LEU 4270.0081
THR 4280.0088
SER 4290.0078
THR 4300.0069
GLY 4310.0050
CYS 4320.0038
ASP 4330.0021
ARG 4340.0026
GLY 4350.0035
ALA 4360.0044
PHE 4370.0079
VAL 4380.0084
ARG 4390.0091
THR 4400.0104
ALA 4410.0054
GLY 4420.0034
GLN 4430.0100
ALA 4440.0068
LEU 4450.0094
PRO 4460.0088
ASP 4470.0055
LEU 4480.0065
GLN 4490.0056
VAL 4500.0066
ARG 4510.0070
PHE 4520.0060
VAL 4530.0056
PRO 4540.0050
GLY 4550.0063
MET 4560.0062
ALA 4570.0053
LEU 4580.0080
ASP 4590.0092
PRO 4600.0093
ASP 4610.0040
GLY 4620.0026
VAL 4630.0032
SER 4640.0080
THR 4650.0064
TYR 4660.0057
VAL 4670.0117
ARG 4680.0103
PHE 4690.0075
ALA 4700.0097
LYS 4710.0092
PHE 4720.0046
GLN 4730.0073
SER 4740.0188
GLN 4750.0221
GLY 4760.0131
LEU 4770.0097
LYS 4780.0074
TRP 4790.0040
PRO 4800.0032
SER 4810.0025
GLY 4820.0063
ILE 4830.0070
THR 4840.0079
MET 4850.0079
GLN 4860.0066
LEU 4870.0060
ILE 4880.0026
ALA 4890.0029
CYS 4900.0072
ARG 4910.0118
PRO 4920.0114
GLN 4930.0156
SER 4940.0146
THR 4950.0127
GLY 4960.0076
SER 4970.0047
VAL 4980.0067
GLY 4990.0095
LEU 5000.0080
LYS 5010.0068
SER 5020.0047
ALA 5030.0110
ASP 5040.0149
PRO 5050.0219
PHE 5060.0179
ALA 5070.0133
PRO 5080.0133
PRO 5090.0115
LYS 5100.0129
LEU 5110.0112
SER 5120.0060
PRO 5130.0041
GLY 5140.0065
TYR 5150.0113
LEU 5160.0136
THR 5170.0177
ASP 5180.0222
LYS 5190.0173
ASP 5200.0107
GLY 5210.0179
ALA 5220.0135
ASP 5230.0104
LEU 5240.0081
ALA 5250.0082
THR 5260.0049
LEU 5270.0052
ARG 5280.0104
LYS 5290.0117
GLY 5300.0090
ILE 5310.0092
HISE 5320.0123
TRP 5330.0087
ALA 5340.0063
ARG 5350.0073
ASP 5360.0075
VAL 5370.0050
ALA 5380.0058
ARG 5390.0133
SER 5400.0143
SER 5410.0188
ALA 5420.0134
LEU 5430.0075
SER 5440.0121
GLU 5450.0046
TYR 5460.0025
LEU 5470.0049
ASP 5480.0044
GLY 5490.0044
GLU 5500.0054
LEU 5510.0133
PHE 5520.0117
PRO 5530.0125
GLY 5540.0048
SER 5550.0155
GLY 5560.0115
VAL 5570.0144
VAL 5580.0136
SER 5590.0111
ASP 5600.0104
ASP 5610.0130
GLN 5620.0137
ILE 5630.0144
ASP 5640.0126
GLU 5650.0200
TYR 5660.0144
ILE 5670.0087
ARG 5680.0113
ARG 5690.0117
SER 5700.0074
ILE 5710.0066
HISD 5720.0017
SER 5730.0028
SER 5740.0042
ASN 5750.0033
ALA 5760.0045
ILE 5770.0025
THR 5780.0038
GLY 5790.0036
THR 5800.0005
CYS 5810.0041
LYS 5820.0027
MET 5830.0025
GLY 5840.0095
ASN 5850.0306
ALA 5860.0474
GLY 5870.0355
ASP 5880.0158
SER 5890.0168
SER 5900.0013
SER 5910.0042
VAL 5920.0075
VAL 5930.0066
ASP 5940.0054
ASN 5950.0038
GLN 5960.0051
LEU 5970.0022
ARG 5980.0073
VAL 5990.0102
HISE 6000.0126
GLY 6010.0172
VAL 6020.0163
GLU 6030.0115
GLY 6040.0055
LEU 6050.0050
ARG 6060.0029
VAL 6070.0054
VAL 6080.0051
ASP 6090.0054
ALA 6100.0048
SER 6110.0030
VAL 6120.0026
VAL 6130.0038
PRO 6140.0054
LYS 6150.0097
ILE 6160.0105
PRO 6170.0097
GLY 6180.0093
GLY 6190.0077
GLN 6200.0043
THR 6210.0042
GLY 6220.0041
ALA 6230.0030
PRO 6240.0027
VAL 6250.0029
VAL 6260.0038
MET 6270.0037
ILE 6280.0039
ALA 6290.0051
GLU 6300.0048
ARG 6310.0057
ALA 6320.0043
ALA 6330.0043
ALA 6340.0045
LEU 6350.0045
LEU 6360.0035
THR 6370.0026
GLY 6380.0109
LYS 6390.0021
ALA 6400.0126
THR 6410.0276
ILE 6420.0144
GLY 6430.0182
ALA 6440.0065
SER 6450.0043
ALA 6460.0047
ALA 6470.0086
ALA 6480.0066
PRO 6490.0065

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.