CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 95  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0418
SER 770.0213
PRO 780.0178
VAL 790.0081
ALA 800.0163
GLY 810.0160
GLN 820.0137
LYS 830.0130
TYR 840.0120
ASP 850.0117
TYR 860.0056
ILE 870.0061
LEU 880.0063
VAL 890.0045
GLY 900.0041
GLY 910.0042
GLY 920.0032
THR 930.0029
ALA 940.0033
ALA 950.0026
CYS 960.0035
VAL 970.0028
LEU 980.0039
ALA 990.0045
ASN 1000.0044
ARG 1010.0049
LEU 1020.0052
SER 1030.0071
ALA 1040.0070
ASP 1050.0101
GLY 1060.0138
SER 1070.0132
LYS 1080.0130
ARG 1090.0143
VAL 1100.0085
LEU 1110.0087
VAL 1120.0098
LEU 1130.0066
GLU 1140.0050
ALA 1150.0042
GLY 1160.0021
PRO 1170.0037
ASP 1180.0054
ASN 1190.0058
THR 1200.0105
SER 1210.0111
ARG 1220.0113
ASP 1230.0069
VAL 1240.0050
LYS 1250.0057
ILE 1260.0053
PRO 1270.0060
ALA 1280.0065
ALA 1290.0065
ILE 1300.0063
THR 1310.0081
ARG 1320.0063
LEU 1330.0049
PHE 1340.0058
ARG 1350.0044
SER 1360.0058
PRO 1370.0041
LEU 1380.0049
ASP 1390.0050
TRP 1400.0048
ASN 1410.0051
LEU 1420.0072
PHE 1430.0075
SER 1440.0091
GLU 1450.0107
LEU 1460.0120
GLN 1470.0053
GLU 1480.0061
GLN 1490.0063
LEU 1500.0062
ALA 1510.0085
GLU 1520.0100
ARG 1530.0077
GLN 1540.0077
ILE 1550.0039
TYR 1560.0039
MET 1570.0053
ALA 1580.0051
ARG 1590.0048
GLY 1600.0045
ARG 1610.0045
LEU 1620.0017
LEU 1630.0009
GLY 1640.0015
GLY 1650.0024
SER 1660.0039
SER 1670.0041
ALA 1680.0041
THR 1690.0047
ASN 1700.0031
ALA 1710.0020
THR 1720.0023
LEU 1730.0057
TYR 1740.0048
HISD 1750.0050
ARG 1760.0116
GLY 1770.0116
ALA 1780.0118
ALA 1790.0131
GLY 1800.0101
ASP 1810.0065
TYR 1820.0030
ASP 1830.0091
ALA 1840.0036
TRP 1850.0120
GLY 1860.0149
VAL 1870.0155
GLU 1880.0175
GLY 1890.0149
TRP 1900.0145
SER 1910.0164
SER 1920.0117
GLU 1930.0284
ASP 1940.0155
VAL 1950.0059
LEU 1960.0120
SER 1970.0115
TRP 1980.0048
PHE 1990.0063
VAL 2000.0104
GLN 2010.0063
ALA 2020.0057
GLU 2030.0091
THR 2040.0073
ASN 2050.0069
ALA 2060.0014
ASP 2070.0032
PHE 2080.0048
GLY 2090.0067
PRO 2100.0126
GLY 2110.0162
ALA 2120.0135
TYR 2130.0126
HISH 2140.0116
GLY 2150.0124
SER 2160.0114
GLY 2170.0098
GLY 2180.0042
PRO 2190.0035
MET 2200.0045
ARG 2210.0017
VAL 2220.0024
GLU 2230.0026
ASN 2240.0047
PRO 2250.0059
ARG 2260.0067
TYR 2270.0065
THR 2280.0056
ASN 2290.0042
LYS 2300.0134
GLN 2310.0162
LEU 2320.0118
HISE 2330.0073
THR 2340.0093
ALA 2350.0118
PHE 2360.0062
PHE 2370.0033
LYS 2380.0039
ALA 2390.0074
ALA 2400.0082
GLU 2410.0083
GLU 2420.0079
VAL 2430.0126
GLY 2440.0142
LEU 2450.0190
THR 2460.0191
PRO 2470.0162
ASN 2480.0178
SER 2490.0189
ASP 2500.0079
PHE 2510.0015
ASN 2520.0049
ASP 2530.0105
TRP 2540.0109
SER 2550.0197
HISE 2560.0194
ASP 2570.0097
HISE 2580.0045
ALA 2590.0102
GLY 2600.0137
TYR 2610.0111
GLY 2620.0094
THR 2630.0052
PHE 2640.0041
GLN 2650.0028
VAL 2660.0027
MET 2670.0015
GLN 2680.0020
ASP 2690.0051
LYS 2700.0074
GLY 2710.0071
THR 2720.0038
ARG 2730.0025
ALA 2740.0025
ASP 2750.0025
MET 2760.0009
TYR 2770.0020
ARG 2780.0011
GLN 2790.0011
TYR 2800.0013
LEU 2810.0048
LYS 2820.0067
PRO 2830.0069
VAL 2840.0056
LEU 2850.0070
GLY 2860.0065
ARG 2870.0039
ARG 2880.0107
ASN 2890.0168
LEU 2900.0081
GLN 2910.0096
VAL 2920.0116
LEU 2930.0106
THR 2940.0076
GLY 2950.0060
ALA 2960.0077
ALA 2970.0078
VAL 2980.0084
THR 2990.0086
LYS 3000.0062
VAL 3010.0047
ASN 3020.0019
ILE 3030.0073
ASP 3040.0167
GLN 3050.0273
ALA 3060.0071
ALA 3070.0333
GLY 3080.0079
LYS 3090.0097
ALA 3100.0092
GLN 3110.0112
ALA 3120.0069
LEU 3130.0089
GLY 3140.0050
VAL 3150.0042
GLU 3160.0063
PHE 3170.0099
SER 3180.0102
THR 3190.0103
ASP 3200.0111
GLY 3210.0186
PRO 3220.0241
THR 3230.0306
GLY 3240.0132
GLU 3250.0131
ARG 3260.0071
LEU 3270.0070
SER 3280.0091
ALA 3290.0054
GLU 3300.0066
LEU 3310.0059
ALA 3320.0108
PRO 3330.0111
GLY 3340.0131
GLY 3350.0023
GLU 3360.0015
VAL 3370.0029
ILE 3380.0031
MET 3390.0033
CYS 3400.0043
ALA 3410.0050
GLY 3420.0045
ALA 3430.0043
VAL 3440.0035
HISD 3450.0042
THR 3460.0048
PRO 3470.0053
PHE 3480.0049
LEU 3490.0055
LEU 3500.0038
LYS 3510.0038
HISE 3520.0041
SER 3530.0055
GLY 3540.0061
VAL 3550.0044
GLY 3560.0047
PRO 3570.0095
SER 3580.0130
ALA 3590.0209
GLU 3600.0153
LEU 3610.0020
LYS 3620.0055
GLU 3630.0157
PHE 3640.0193
GLY 3650.0151
ILE 3660.0150
PRO 3670.0217
VAL 3680.0097
VAL 3690.0066
SER 3700.0082
ASN 3710.0037
LEU 3720.0041
ALA 3730.0060
GLY 3740.0046
VAL 3750.0049
GLY 3760.0070
GLN 3770.0069
ASN 3780.0076
LEU 3790.0068
GLN 3800.0053
ASP 3810.0031
GLN 3820.0029
PRO 3830.0021
ALA 3840.0020
CYS 3850.0031
LEU 3860.0054
THR 3870.0067
ALA 3880.0076
ALA 3890.0086
PRO 3900.0084
VAL 3910.0054
LYS 3920.0123
GLU 3930.0167
LYS 3940.0202
TYR 3950.0142
ASP 3960.0175
GLY 3970.0203
ILE 3980.0064
ALA 3990.0035
ILE 4000.0028
SER 4010.0006
ASP 4020.0024
HISE 4030.0020
ILE 4040.0043
TYR 4050.0021
ASN 4060.0034
GLU 4070.0249
LYS 4080.0143
GLY 4090.0116
GLN 4100.0030
ILE 4110.0031
ARG 4120.0024
LYS 4130.0109
ARG 4140.0087
ALA 4150.0088
ILE 4160.0100
ALA 4170.0079
SER 4180.0065
TYR 4190.0049
LEU 4200.0033
LEU 4210.0058
GLY 4220.0082
GLY 4230.0057
ARG 4240.0083
GLY 4250.0059
GLY 4260.0064
LEU 4270.0059
THR 4280.0063
SER 4290.0060
THR 4300.0060
GLY 4310.0028
CYS 4320.0039
ASP 4330.0044
ARG 4340.0033
GLY 4350.0045
ALA 4360.0055
PHE 4370.0073
VAL 4380.0094
ARG 4390.0093
THR 4400.0124
ALA 4410.0160
GLY 4420.0165
GLN 4430.0080
ALA 4440.0052
LEU 4450.0028
PRO 4460.0060
ASP 4470.0064
LEU 4480.0047
GLN 4490.0030
VAL 4500.0027
ARG 4510.0027
PHE 4520.0051
VAL 4530.0048
PRO 4540.0053
GLY 4550.0052
MET 4560.0049
ALA 4570.0046
LEU 4580.0047
ASP 4590.0058
PRO 4600.0055
ASP 4610.0041
GLY 4620.0039
VAL 4630.0038
SER 4640.0089
THR 4650.0082
TYR 4660.0095
VAL 4670.0160
ARG 4680.0141
PHE 4690.0132
ALA 4700.0195
LYS 4710.0204
PHE 4720.0178
GLN 4730.0156
SER 4740.0244
GLN 4750.0307
GLY 4760.0168
LEU 4770.0163
LYS 4780.0163
TRP 4790.0061
PRO 4800.0032
SER 4810.0048
GLY 4820.0064
ILE 4830.0067
THR 4840.0069
MET 4850.0049
GLN 4860.0036
LEU 4870.0024
ILE 4880.0015
ALA 4890.0021
CYS 4900.0022
ARG 4910.0013
PRO 4920.0035
GLN 4930.0060
SER 4940.0073
THR 4950.0075
GLY 4960.0063
SER 4970.0050
VAL 4980.0049
GLY 4990.0046
LEU 5000.0013
LYS 5010.0031
SER 5020.0072
ALA 5030.0070
ASP 5040.0104
PRO 5050.0138
PHE 5060.0121
ALA 5070.0117
PRO 5080.0080
PRO 5090.0045
LYS 5100.0053
LEU 5110.0062
SER 5120.0065
PRO 5130.0067
GLY 5140.0066
TYR 5150.0049
LEU 5160.0065
THR 5170.0080
ASP 5180.0032
LYS 5190.0103
ASP 5200.0036
GLY 5210.0051
ALA 5220.0051
ASP 5230.0052
LEU 5240.0047
ALA 5250.0036
THR 5260.0054
LEU 5270.0023
ARG 5280.0018
LYS 5290.0035
GLY 5300.0034
ILE 5310.0038
HISE 5320.0043
TRP 5330.0015
ALA 5340.0023
ARG 5350.0026
ASP 5360.0062
VAL 5370.0049
ALA 5380.0051
ARG 5390.0054
SER 5400.0073
SER 5410.0079
ALA 5420.0076
LEU 5430.0060
SER 5440.0022
GLU 5450.0110
TYR 5460.0048
LEU 5470.0050
ASP 5480.0096
GLY 5490.0092
GLU 5500.0093
LEU 5510.0088
PHE 5520.0077
PRO 5530.0083
GLY 5540.0085
SER 5550.0083
GLY 5560.0098
VAL 5570.0068
VAL 5580.0055
SER 5590.0099
ASP 5600.0089
ASP 5610.0122
GLN 5620.0103
ILE 5630.0069
ASP 5640.0065
GLU 5650.0082
TYR 5660.0060
ILE 5670.0031
ARG 5680.0038
ARG 5690.0051
SER 5700.0036
ILE 5710.0030
HISD 5720.0034
SER 5730.0031
SER 5740.0028
ASN 5750.0029
ALA 5760.0031
ILE 5770.0038
THR 5780.0062
GLY 5790.0062
THR 5800.0066
CYS 5810.0079
LYS 5820.0078
MET 5830.0070
GLY 5840.0099
ASN 5850.0077
ALA 5860.0123
GLY 5870.0383
ASP 5880.0149
SER 5890.0217
SER 5900.0097
SER 5910.0047
VAL 5920.0027
VAL 5930.0037
ASP 5940.0056
ASN 5950.0076
GLN 5960.0127
LEU 5970.0058
ARG 5980.0079
VAL 5990.0036
HISE 6000.0076
GLY 6010.0109
VAL 6020.0083
GLU 6030.0100
GLY 6040.0093
LEU 6050.0029
ARG 6060.0037
VAL 6070.0044
VAL 6080.0058
ASP 6090.0059
ALA 6100.0051
SER 6110.0072
VAL 6120.0068
VAL 6130.0068
PRO 6140.0094
LYS 6150.0063
ILE 6160.0042
PRO 6170.0035
GLY 6180.0039
GLY 6190.0040
GLN 6200.0026
THR 6210.0018
GLY 6220.0012
ALA 6230.0029
PRO 6240.0006
VAL 6250.0035
VAL 6260.0043
MET 6270.0032
ILE 6280.0062
ALA 6290.0082
GLU 6300.0071
ARG 6310.0080
ALA 6320.0060
ALA 6330.0083
ALA 6340.0095
LEU 6350.0070
LEU 6360.0034
THR 6370.0069
GLY 6380.0067
LYS 6390.0185
ALA 6400.0220
THR 6410.0351
ILE 6420.0199
GLY 6430.0296
ALA 6440.0418
SER 6450.0116
ALA 6460.0162
ALA 6470.0181
ALA 6480.0260
PRO 6490.0175

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.