CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 96  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0425
SER 770.0098
PRO 780.0043
VAL 790.0030
ALA 800.0059
GLY 810.0104
GLN 820.0082
LYS 830.0036
TYR 840.0038
ASP 850.0056
TYR 860.0030
ILE 870.0019
LEU 880.0040
VAL 890.0038
GLY 900.0051
GLY 910.0061
GLY 920.0058
THR 930.0052
ALA 940.0049
ALA 950.0065
CYS 960.0058
VAL 970.0049
LEU 980.0036
ALA 990.0037
ASN 1000.0023
ARG 1010.0022
LEU 1020.0022
SER 1030.0022
ALA 1040.0110
ASP 1050.0169
GLY 1060.0185
SER 1070.0169
LYS 1080.0111
ARG 1090.0034
VAL 1100.0019
LEU 1110.0026
VAL 1120.0053
LEU 1130.0045
GLU 1140.0035
ALA 1150.0014
GLY 1160.0074
PRO 1170.0109
ASP 1180.0141
ASN 1190.0095
THR 1200.0148
SER 1210.0111
ARG 1220.0067
ASP 1230.0047
VAL 1240.0041
LYS 1250.0044
ILE 1260.0053
PRO 1270.0060
ALA 1280.0067
ALA 1290.0059
ILE 1300.0059
THR 1310.0059
ARG 1320.0052
LEU 1330.0063
PHE 1340.0089
ARG 1350.0094
SER 1360.0111
PRO 1370.0146
LEU 1380.0100
ASP 1390.0126
TRP 1400.0084
ASN 1410.0085
LEU 1420.0070
PHE 1430.0061
SER 1440.0058
GLU 1450.0074
LEU 1460.0194
GLN 1470.0164
GLU 1480.0299
GLN 1490.0127
LEU 1500.0127
ALA 1510.0153
GLU 1520.0253
ARG 1530.0156
GLN 1540.0086
ILE 1550.0037
TYR 1560.0028
MET 1570.0055
ALA 1580.0061
ARG 1590.0063
GLY 1600.0070
ARG 1610.0082
LEU 1620.0026
LEU 1630.0041
GLY 1640.0035
GLY 1650.0021
SER 1660.0043
SER 1670.0045
ALA 1680.0014
THR 1690.0038
ASN 1700.0047
ALA 1710.0044
THR 1720.0044
LEU 1730.0039
TYR 1740.0044
HISD 1750.0040
ARG 1760.0130
GLY 1770.0153
ALA 1780.0165
ALA 1790.0223
GLY 1800.0186
ASP 1810.0129
TYR 1820.0092
ASP 1830.0169
ALA 1840.0123
TRP 1850.0113
GLY 1860.0120
VAL 1870.0108
GLU 1880.0113
GLY 1890.0084
TRP 1900.0071
SER 1910.0157
SER 1920.0206
GLU 1930.0294
ASP 1940.0115
VAL 1950.0031
LEU 1960.0114
SER 1970.0041
TRP 1980.0043
PHE 1990.0092
VAL 2000.0091
GLN 2010.0092
ALA 2020.0118
GLU 2030.0117
THR 2040.0117
ASN 2050.0093
ALA 2060.0102
ASP 2070.0028
PHE 2080.0046
GLY 2090.0137
PRO 2100.0155
GLY 2110.0137
ALA 2120.0051
TYR 2130.0067
HISH 2140.0055
GLY 2150.0105
SER 2160.0133
GLY 2170.0158
GLY 2180.0084
PRO 2190.0080
MET 2200.0079
ARG 2210.0030
VAL 2220.0027
GLU 2230.0017
ASN 2240.0038
PRO 2250.0047
ARG 2260.0082
TYR 2270.0098
THR 2280.0077
ASN 2290.0057
LYS 2300.0135
GLN 2310.0175
LEU 2320.0124
HISE 2330.0066
THR 2340.0095
ALA 2350.0097
PHE 2360.0063
PHE 2370.0084
LYS 2380.0062
ALA 2390.0054
ALA 2400.0103
GLU 2410.0080
GLU 2420.0116
VAL 2430.0183
GLY 2440.0181
LEU 2450.0183
THR 2460.0186
PRO 2470.0171
ASN 2480.0187
SER 2490.0221
ASP 2500.0103
PHE 2510.0031
ASN 2520.0059
ASP 2530.0117
TRP 2540.0151
SER 2550.0238
HISE 2560.0220
ASP 2570.0096
HISE 2580.0023
ALA 2590.0078
GLY 2600.0132
TYR 2610.0132
GLY 2620.0126
THR 2630.0061
PHE 2640.0043
GLN 2650.0023
VAL 2660.0019
MET 2670.0021
GLN 2680.0032
ASP 2690.0092
LYS 2700.0148
GLY 2710.0069
THR 2720.0014
ARG 2730.0021
ALA 2740.0027
ASP 2750.0046
MET 2760.0055
TYR 2770.0060
ARG 2780.0033
GLN 2790.0025
TYR 2800.0021
LEU 2810.0045
LYS 2820.0076
PRO 2830.0090
VAL 2840.0090
LEU 2850.0105
GLY 2860.0141
ARG 2870.0101
ARG 2880.0112
ASN 2890.0053
LEU 2900.0036
GLN 2910.0042
VAL 2920.0068
LEU 2930.0056
THR 2940.0052
GLY 2950.0040
ALA 2960.0029
ALA 2970.0025
VAL 2980.0022
THR 2990.0035
LYS 3000.0032
VAL 3010.0024
ASN 3020.0061
ILE 3030.0077
ASP 3040.0108
GLN 3050.0157
ALA 3060.0103
ALA 3070.0288
GLY 3080.0151
LYS 3090.0140
ALA 3100.0103
GLN 3110.0117
ALA 3120.0098
LEU 3130.0106
GLY 3140.0039
VAL 3150.0016
GLU 3160.0013
PHE 3170.0024
SER 3180.0018
THR 3190.0027
ASP 3200.0023
GLY 3210.0033
PRO 3220.0031
THR 3230.0042
GLY 3240.0023
GLU 3250.0051
ARG 3260.0029
LEU 3270.0016
SER 3280.0019
ALA 3290.0018
GLU 3300.0022
LEU 3310.0033
ALA 3320.0035
PRO 3330.0130
GLY 3340.0082
GLY 3350.0049
GLU 3360.0030
VAL 3370.0021
ILE 3380.0023
MET 3390.0037
CYS 3400.0058
ALA 3410.0059
GLY 3420.0056
ALA 3430.0050
VAL 3440.0036
HISD 3450.0034
THR 3460.0039
PRO 3470.0023
PHE 3480.0018
LEU 3490.0034
LEU 3500.0035
LYS 3510.0030
HISE 3520.0038
SER 3530.0042
GLY 3540.0047
VAL 3550.0046
GLY 3560.0043
PRO 3570.0039
SER 3580.0041
ALA 3590.0037
GLU 3600.0033
LEU 3610.0052
LYS 3620.0069
GLU 3630.0031
PHE 3640.0056
GLY 3650.0092
ILE 3660.0104
PRO 3670.0118
VAL 3680.0058
VAL 3690.0051
SER 3700.0051
ASN 3710.0033
LEU 3720.0037
ALA 3730.0047
GLY 3740.0050
VAL 3750.0034
GLY 3760.0011
GLN 3770.0033
ASN 3780.0049
LEU 3790.0027
GLN 3800.0047
ASP 3810.0049
GLN 3820.0043
PRO 3830.0044
ALA 3840.0047
CYS 3850.0026
LEU 3860.0056
THR 3870.0056
ALA 3880.0054
ALA 3890.0058
PRO 3900.0064
VAL 3910.0055
LYS 3920.0060
GLU 3930.0079
LYS 3940.0059
TYR 3950.0058
ASP 3960.0050
GLY 3970.0060
ILE 3980.0065
ALA 3990.0072
ILE 4000.0064
SER 4010.0035
ASP 4020.0032
HISE 4030.0034
ILE 4040.0032
TYR 4050.0027
ASN 4060.0048
GLU 4070.0237
LYS 4080.0161
GLY 4090.0076
GLN 4100.0054
ILE 4110.0030
ARG 4120.0032
LYS 4130.0096
ARG 4140.0082
ALA 4150.0082
ILE 4160.0069
ALA 4170.0047
SER 4180.0023
TYR 4190.0036
LEU 4200.0012
LEU 4210.0033
GLY 4220.0057
GLY 4230.0081
ARG 4240.0084
GLY 4250.0047
GLY 4260.0057
LEU 4270.0060
THR 4280.0079
SER 4290.0069
THR 4300.0068
GLY 4310.0041
CYS 4320.0046
ASP 4330.0036
ARG 4340.0044
GLY 4350.0071
ALA 4360.0092
PHE 4370.0084
VAL 4380.0076
ARG 4390.0065
THR 4400.0136
ALA 4410.0123
GLY 4420.0152
GLN 4430.0165
ALA 4440.0043
LEU 4450.0088
PRO 4460.0107
ASP 4470.0098
LEU 4480.0083
GLN 4490.0072
VAL 4500.0069
ARG 4510.0069
PHE 4520.0072
VAL 4530.0069
PRO 4540.0068
GLY 4550.0074
MET 4560.0060
ALA 4570.0054
LEU 4580.0037
ASP 4590.0018
PRO 4600.0025
ASP 4610.0052
GLY 4620.0047
VAL 4630.0033
SER 4640.0044
THR 4650.0031
TYR 4660.0032
VAL 4670.0090
ARG 4680.0092
PHE 4690.0081
ALA 4700.0137
LYS 4710.0152
PHE 4720.0108
GLN 4730.0126
SER 4740.0243
GLN 4750.0263
GLY 4760.0142
LEU 4770.0105
LYS 4780.0093
TRP 4790.0032
PRO 4800.0033
SER 4810.0041
GLY 4820.0068
ILE 4830.0066
THR 4840.0064
MET 4850.0026
GLN 4860.0032
LEU 4870.0025
ILE 4880.0058
ALA 4890.0064
CYS 4900.0089
ARG 4910.0091
PRO 4920.0072
GLN 4930.0057
SER 4940.0058
THR 4950.0037
GLY 4960.0045
SER 4970.0055
VAL 4980.0046
GLY 4990.0045
LEU 5000.0040
LYS 5010.0060
SER 5020.0048
ALA 5030.0058
ASP 5040.0059
PRO 5050.0063
PHE 5060.0062
ALA 5070.0057
PRO 5080.0079
PRO 5090.0070
LYS 5100.0071
LEU 5110.0072
SER 5120.0083
PRO 5130.0072
GLY 5140.0069
TYR 5150.0024
LEU 5160.0020
THR 5170.0060
ASP 5180.0274
LYS 5190.0144
ASP 5200.0240
GLY 5210.0196
ALA 5220.0168
ASP 5230.0118
LEU 5240.0114
ALA 5250.0142
THR 5260.0131
LEU 5270.0092
ARG 5280.0157
LYS 5290.0183
GLY 5300.0124
ILE 5310.0118
HISE 5320.0147
TRP 5330.0119
ALA 5340.0104
ARG 5350.0145
ASP 5360.0179
VAL 5370.0105
ALA 5380.0077
ARG 5390.0166
SER 5400.0170
SER 5410.0199
ALA 5420.0086
LEU 5430.0032
SER 5440.0062
GLU 5450.0089
TYR 5460.0089
LEU 5470.0052
ASP 5480.0032
GLY 5490.0021
GLU 5500.0087
LEU 5510.0101
PHE 5520.0121
PRO 5530.0151
GLY 5540.0108
SER 5550.0194
GLY 5560.0136
VAL 5570.0217
VAL 5580.0116
SER 5590.0164
ASP 5600.0245
ASP 5610.0164
GLN 5620.0138
ILE 5630.0170
ASP 5640.0139
GLU 5650.0172
TYR 5660.0106
ILE 5670.0064
ARG 5680.0064
ARG 5690.0073
SER 5700.0041
ILE 5710.0066
HISD 5720.0070
SER 5730.0071
SER 5740.0068
ASN 5750.0045
ALA 5760.0042
ILE 5770.0038
THR 5780.0064
GLY 5790.0070
THR 5800.0052
CYS 5810.0085
LYS 5820.0085
MET 5830.0089
GLY 5840.0085
ASN 5850.0276
ALA 5860.0425
GLY 5870.0285
ASP 5880.0150
SER 5890.0174
SER 5900.0079
SER 5910.0059
VAL 5920.0069
VAL 5930.0048
ASP 5940.0009
ASN 5950.0007
GLN 5960.0054
LEU 5970.0036
ARG 5980.0070
VAL 5990.0039
HISE 6000.0030
GLY 6010.0047
VAL 6020.0098
GLU 6030.0134
GLY 6040.0135
LEU 6050.0036
ARG 6060.0024
VAL 6070.0049
VAL 6080.0067
ASP 6090.0074
ALA 6100.0079
SER 6110.0082
VAL 6120.0087
VAL 6130.0088
PRO 6140.0111
LYS 6150.0097
ILE 6160.0083
PRO 6170.0069
GLY 6180.0065
GLY 6190.0062
GLN 6200.0041
THR 6210.0037
GLY 6220.0029
ALA 6230.0025
PRO 6240.0010
VAL 6250.0034
VAL 6260.0042
MET 6270.0037
ILE 6280.0042
ALA 6290.0063
GLU 6300.0064
ARG 6310.0063
ALA 6320.0045
ALA 6330.0043
ALA 6340.0055
LEU 6350.0047
LEU 6360.0035
THR 6370.0023
GLY 6380.0099
LYS 6390.0042
ALA 6400.0166
THR 6410.0301
ILE 6420.0152
GLY 6430.0208
ALA 6440.0065
SER 6450.0048
ALA 6460.0037
ALA 6470.0086
ALA 6480.0051
PRO 6490.0055

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.