CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607021800562097571

---  normal mode 99  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0378
SER 770.0171
PRO 780.0121
VAL 790.0040
ALA 800.0110
GLY 810.0201
GLN 820.0156
LYS 830.0049
TYR 840.0037
ASP 850.0053
TYR 860.0044
ILE 870.0029
LEU 880.0025
VAL 890.0037
GLY 900.0036
GLY 910.0032
GLY 920.0056
THR 930.0070
ALA 940.0054
ALA 950.0029
CYS 960.0040
VAL 970.0051
LEU 980.0019
ALA 990.0026
ASN 1000.0024
ARG 1010.0044
LEU 1020.0059
SER 1030.0097
ALA 1040.0201
ASP 1050.0248
GLY 1060.0270
SER 1070.0269
LYS 1080.0162
ARG 1090.0089
VAL 1100.0048
LEU 1110.0042
VAL 1120.0039
LEU 1130.0015
GLU 1140.0018
ALA 1150.0036
GLY 1160.0046
PRO 1170.0063
ASP 1180.0112
ASN 1190.0146
THR 1200.0134
SER 1210.0116
ARG 1220.0193
ASP 1230.0156
VAL 1240.0054
LYS 1250.0035
ILE 1260.0034
PRO 1270.0027
ALA 1280.0037
ALA 1290.0024
ILE 1300.0024
THR 1310.0036
ARG 1320.0014
LEU 1330.0019
PHE 1340.0048
ARG 1350.0086
SER 1360.0080
PRO 1370.0095
LEU 1380.0045
ASP 1390.0096
TRP 1400.0133
ASN 1410.0109
LEU 1420.0110
PHE 1430.0097
SER 1440.0105
GLU 1450.0131
LEU 1460.0087
GLN 1470.0077
GLU 1480.0058
GLN 1490.0043
LEU 1500.0017
ALA 1510.0019
GLU 1520.0050
ARG 1530.0050
GLN 1540.0054
ILE 1550.0088
TYR 1560.0070
MET 1570.0054
ALA 1580.0058
ARG 1590.0079
GLY 1600.0087
ARG 1610.0066
LEU 1620.0017
LEU 1630.0055
GLY 1640.0074
GLY 1650.0056
SER 1660.0068
SER 1670.0084
ALA 1680.0070
THR 1690.0049
ASN 1700.0036
ALA 1710.0032
THR 1720.0031
LEU 1730.0047
TYR 1740.0035
HISD 1750.0043
ARG 1760.0069
GLY 1770.0066
ALA 1780.0064
ALA 1790.0083
GLY 1800.0101
ASP 1810.0110
TYR 1820.0116
ASP 1830.0128
ALA 1840.0162
TRP 1850.0113
GLY 1860.0112
VAL 1870.0116
GLU 1880.0138
GLY 1890.0130
TRP 1900.0116
SER 1910.0137
SER 1920.0130
GLU 1930.0108
ASP 1940.0053
VAL 1950.0055
LEU 1960.0062
SER 1970.0034
TRP 1980.0034
PHE 1990.0040
VAL 2000.0038
GLN 2010.0051
ALA 2020.0048
GLU 2030.0041
THR 2040.0037
ASN 2050.0033
ALA 2060.0119
ASP 2070.0079
PHE 2080.0106
GLY 2090.0069
PRO 2100.0054
GLY 2110.0120
ALA 2120.0122
TYR 2130.0136
HISH 2140.0098
GLY 2150.0057
SER 2160.0052
GLY 2170.0051
GLY 2180.0023
PRO 2190.0037
MET 2200.0037
ARG 2210.0045
VAL 2220.0064
GLU 2230.0077
ASN 2240.0098
PRO 2250.0067
ARG 2260.0045
TYR 2270.0057
THR 2280.0062
ASN 2290.0090
LYS 2300.0134
GLN 2310.0127
LEU 2320.0050
HISE 2330.0031
THR 2340.0090
ALA 2350.0080
PHE 2360.0055
PHE 2370.0091
LYS 2380.0095
ALA 2390.0081
ALA 2400.0088
GLU 2410.0092
GLU 2420.0104
VAL 2430.0108
GLY 2440.0130
LEU 2450.0105
THR 2460.0148
PRO 2470.0136
ASN 2480.0074
SER 2490.0065
ASP 2500.0083
PHE 2510.0078
ASN 2520.0106
ASP 2530.0116
TRP 2540.0113
SER 2550.0195
HISE 2560.0151
ASP 2570.0115
HISE 2580.0109
ALA 2590.0105
GLY 2600.0048
TYR 2610.0044
GLY 2620.0073
THR 2630.0054
PHE 2640.0056
GLN 2650.0066
VAL 2660.0061
MET 2670.0052
GLN 2680.0046
ASP 2690.0052
LYS 2700.0039
GLY 2710.0033
THR 2720.0011
ARG 2730.0026
ALA 2740.0052
ASP 2750.0108
MET 2760.0101
TYR 2770.0093
ARG 2780.0098
GLN 2790.0098
TYR 2800.0094
LEU 2810.0071
LYS 2820.0165
PRO 2830.0215
VAL 2840.0054
LEU 2850.0081
GLY 2860.0096
ARG 2870.0234
ARG 2880.0201
ASN 2890.0156
LEU 2900.0071
GLN 2910.0056
VAL 2920.0055
LEU 2930.0036
THR 2940.0036
GLY 2950.0056
ALA 2960.0028
ALA 2970.0019
VAL 2980.0030
THR 2990.0019
LYS 3000.0039
VAL 3010.0050
ASN 3020.0066
ILE 3030.0063
ASP 3040.0066
GLN 3050.0083
ALA 3060.0090
ALA 3070.0125
GLY 3080.0062
LYS 3090.0060
ALA 3100.0069
GLN 3110.0061
ALA 3120.0066
LEU 3130.0079
GLY 3140.0039
VAL 3150.0034
GLU 3160.0038
PHE 3170.0055
SER 3180.0067
THR 3190.0072
ASP 3200.0064
GLY 3210.0086
PRO 3220.0102
THR 3230.0157
GLY 3240.0085
GLU 3250.0136
ARG 3260.0082
LEU 3270.0064
SER 3280.0061
ALA 3290.0014
GLU 3300.0025
LEU 3310.0032
ALA 3320.0042
PRO 3330.0072
GLY 3340.0075
GLY 3350.0057
GLU 3360.0047
VAL 3370.0043
ILE 3380.0039
MET 3390.0049
CYS 3400.0046
ALA 3410.0067
GLY 3420.0058
ALA 3430.0047
VAL 3440.0066
HISD 3450.0071
THR 3460.0069
PRO 3470.0035
PHE 3480.0033
LEU 3490.0055
LEU 3500.0051
LYS 3510.0030
HISE 3520.0046
SER 3530.0059
GLY 3540.0041
VAL 3550.0031
GLY 3560.0030
PRO 3570.0060
SER 3580.0063
ALA 3590.0086
GLU 3600.0075
LEU 3610.0035
LYS 3620.0042
GLU 3630.0081
PHE 3640.0059
GLY 3650.0062
ILE 3660.0061
PRO 3670.0075
VAL 3680.0054
VAL 3690.0057
SER 3700.0013
ASN 3710.0055
LEU 3720.0052
ALA 3730.0095
GLY 3740.0058
VAL 3750.0052
GLY 3760.0053
GLN 3770.0040
ASN 3780.0030
LEU 3790.0040
GLN 3800.0019
ASP 3810.0024
GLN 3820.0030
PRO 3830.0041
ALA 3840.0047
CYS 3850.0054
LEU 3860.0065
THR 3870.0072
ALA 3880.0074
ALA 3890.0115
PRO 3900.0123
VAL 3910.0096
LYS 3920.0157
GLU 3930.0137
LYS 3940.0101
TYR 3950.0173
ASP 3960.0246
GLY 3970.0269
ILE 3980.0131
ALA 3990.0133
ILE 4000.0133
SER 4010.0132
ASP 4020.0135
HISE 4030.0123
ILE 4040.0035
TYR 4050.0037
ASN 4060.0085
GLU 4070.0158
LYS 4080.0092
GLY 4090.0059
GLN 4100.0045
ILE 4110.0060
ARG 4120.0087
LYS 4130.0028
ARG 4140.0044
ALA 4150.0072
ILE 4160.0032
ALA 4170.0033
SER 4180.0033
TYR 4190.0026
LEU 4200.0042
LEU 4210.0067
GLY 4220.0099
GLY 4230.0080
ARG 4240.0026
GLY 4250.0025
GLY 4260.0031
LEU 4270.0023
THR 4280.0034
SER 4290.0050
THR 4300.0063
GLY 4310.0055
CYS 4320.0071
ASP 4330.0069
ARG 4340.0053
GLY 4350.0038
ALA 4360.0024
PHE 4370.0085
VAL 4380.0108
ARG 4390.0121
THR 4400.0229
ALA 4410.0319
GLY 4420.0342
GLN 4430.0197
ALA 4440.0116
LEU 4450.0101
PRO 4460.0121
ASP 4470.0135
LEU 4480.0113
GLN 4490.0057
VAL 4500.0052
ARG 4510.0058
PHE 4520.0077
VAL 4530.0080
PRO 4540.0065
GLY 4550.0080
MET 4560.0083
ALA 4570.0072
LEU 4580.0080
ASP 4590.0087
PRO 4600.0081
ASP 4610.0113
GLY 4620.0114
VAL 4630.0113
SER 4640.0102
THR 4650.0108
TYR 4660.0102
VAL 4670.0066
ARG 4680.0076
PHE 4690.0072
ALA 4700.0077
LYS 4710.0083
PHE 4720.0084
GLN 4730.0058
SER 4740.0095
GLN 4750.0122
GLY 4760.0052
LEU 4770.0048
LYS 4780.0057
TRP 4790.0058
PRO 4800.0078
SER 4810.0092
GLY 4820.0095
ILE 4830.0076
THR 4840.0084
MET 4850.0064
GLN 4860.0057
LEU 4870.0056
ILE 4880.0076
ALA 4890.0080
CYS 4900.0071
ARG 4910.0009
PRO 4920.0057
GLN 4930.0165
SER 4940.0095
THR 4950.0093
GLY 4960.0088
SER 4970.0084
VAL 4980.0049
GLY 4990.0051
LEU 5000.0059
LYS 5010.0140
SER 5020.0144
ALA 5030.0055
ASP 5040.0084
PRO 5050.0076
PHE 5060.0108
ALA 5070.0107
PRO 5080.0148
PRO 5090.0089
LYS 5100.0102
LEU 5110.0076
SER 5120.0088
PRO 5130.0089
GLY 5140.0084
TYR 5150.0077
LEU 5160.0086
THR 5170.0106
ASP 5180.0267
LYS 5190.0314
ASP 5200.0378
GLY 5210.0269
ALA 5220.0210
ASP 5230.0116
LEU 5240.0137
ALA 5250.0144
THR 5260.0161
LEU 5270.0099
ARG 5280.0096
LYS 5290.0091
GLY 5300.0082
ILE 5310.0070
HISE 5320.0076
TRP 5330.0066
ALA 5340.0044
ARG 5350.0071
ASP 5360.0074
VAL 5370.0063
ALA 5380.0067
ARG 5390.0058
SER 5400.0067
SER 5410.0099
ALA 5420.0087
LEU 5430.0045
SER 5440.0039
GLU 5450.0091
TYR 5460.0066
LEU 5470.0044
ASP 5480.0134
GLY 5490.0151
GLU 5500.0107
LEU 5510.0070
PHE 5520.0059
PRO 5530.0078
GLY 5540.0109
SER 5550.0114
GLY 5560.0084
VAL 5570.0102
VAL 5580.0063
SER 5590.0103
ASP 5600.0154
ASP 5610.0085
GLN 5620.0061
ILE 5630.0099
ASP 5640.0121
GLU 5650.0121
TYR 5660.0081
ILE 5670.0072
ARG 5680.0074
ARG 5690.0084
SER 5700.0054
ILE 5710.0030
HISD 5720.0060
SER 5730.0053
SER 5740.0063
ASN 5750.0056
ALA 5760.0048
ILE 5770.0035
THR 5780.0011
GLY 5790.0008
THR 5800.0024
CYS 5810.0031
LYS 5820.0033
MET 5830.0037
GLY 5840.0050
ASN 5850.0129
ALA 5860.0363
GLY 5870.0284
ASP 5880.0220
SER 5890.0157
SER 5900.0095
SER 5910.0084
VAL 5920.0054
VAL 5930.0047
ASP 5940.0045
ASN 5950.0069
GLN 5960.0061
LEU 5970.0022
ARG 5980.0059
VAL 5990.0042
HISE 6000.0023
GLY 6010.0010
VAL 6020.0038
GLU 6030.0047
GLY 6040.0061
LEU 6050.0047
ARG 6060.0034
VAL 6070.0044
VAL 6080.0042
ASP 6090.0042
ALA 6100.0044
SER 6110.0008
VAL 6120.0019
VAL 6130.0038
PRO 6140.0090
LYS 6150.0060
ILE 6160.0034
PRO 6170.0048
GLY 6180.0034
GLY 6190.0069
GLN 6200.0035
THR 6210.0038
GLY 6220.0064
ALA 6230.0062
PRO 6240.0062
VAL 6250.0070
VAL 6260.0069
MET 6270.0066
ILE 6280.0068
ALA 6290.0054
GLU 6300.0054
ARG 6310.0063
ALA 6320.0009
ALA 6330.0022
ALA 6340.0047
LEU 6350.0059
LEU 6360.0075
THR 6370.0100
GLY 6380.0189
LYS 6390.0171
ALA 6400.0184
THR 6410.0371
ILE 6420.0210
GLY 6430.0218
ALA 6440.0245
SER 6450.0081
ALA 6460.0072
ALA 6470.0075
ALA 6480.0085
PRO 6490.0055

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.