CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***    ***

Normal Mode Analysis for ID 2607021803312099038

Conformational change expected to be analysed

%Projmod-Wn> Eigenvector 14 Norm= 1.0001

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 3 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.0048 0.002 133.4795
mode 8 1.34 0.0047 0.004 135.6530
mode 9 2.51 0.0042 0.004 47.7696
mode 10 3.71 0.5815 0.004 -53.1962
mode 11 3.95 0.6033 0.007 -129.9029
mode 12 4.30 0.5762 0.011 189.7659
mode 13 4.35 0.0151 0.011 22.5548
mode 14 5.37 0.0201 0.031 -411.0634
mode 15 5.71 0.4292 0.039 -260.5742
mode 16 6.06 0.4417 0.039 -61.0754
mode 17 6.17 0.4678 0.048 -274.7143
mode 18 6.36 0.1844 0.049 -41.4377
mode 19 6.53 0.2760 0.087 571.8490
mode 20 6.66 0.3358 0.104 394.0202
mode 21 6.95 0.2130 0.121 375.9868
mode 22 7.09 0.3150 0.121 54.3184
mode 23 7.44 0.1189 0.124 167.1491
mode 24 7.56 0.4955 0.125 -38.9782
mode 25 7.66 0.3945 0.140 -357.7229
mode 26 7.73 0.3351 0.151 -311.3645
mode 27 7.85 0.5094 0.164 330.3894
mode 28 8.10 0.3153 0.164 -36.9094
mode 29 8.33 0.4933 0.169 208.3159
mode 30 8.34 0.4216 0.170 31.5350
mode 31 8.50 0.3100 0.188 -395.6759
mode 32 8.59 0.4601 0.190 133.4796
mode 33 8.63 0.4415 0.196 241.2971
mode 34 8.81 0.2133 0.205 266.7746
mode 35 8.97 0.2275 0.209 -187.3479
mode 36 9.01 0.3194 0.218 -278.0465
mode 37 9.08 0.3893 0.219 -89.1704
mode 38 9.24 0.3753 0.224 -219.2096
mode 39 9.34 0.4031 0.224 48.8684
mode 40 9.59 0.4812 0.246 434.4564
mode 41 9.77 0.2798 0.253 235.8134
mode 42 9.91 0.2136 0.254 101.4789
mode 43 9.99 0.2016 0.276 431.1756
mode 44 10.01 0.1736 0.276 -47.4274
mode 45 10.17 0.5756 0.276 -30.2719
mode 46 10.19 0.4514 0.276 -34.4561
mode 47 10.38 0.3530 0.280 -172.6731
mode 48 10.47 0.4174 0.280 -11.4966
mode 49 10.55 0.4130 0.280 -18.7190
mode 50 10.63 0.4029 0.285 -202.1474
mode 51 10.70 0.4019 0.289 -183.5686
mode 52 10.83 0.3554 0.296 -253.8336
mode 53 11.03 0.2861 0.304 254.7414
mode 54 11.06 0.3116 0.304 -20.8064
mode 55 11.17 0.2461 0.305 -76.0112
mode 56 11.21 0.3365 0.357 673.3564
mode 57 11.36 0.3413 0.357 35.2341
mode 58 11.44 0.1813 0.370 -319.3011
mode 59 11.54 0.3647 0.398 495.8670
mode 60 11.67 0.4644 0.402 -166.6573
mode 61 11.75 0.4047 0.416 -349.9789
mode 62 11.85 0.3335 0.416 -59.3124
mode 63 11.95 0.2544 0.465 -642.5118
mode 64 12.00 0.4362 0.516 -660.7594
mode 65 12.07 0.3384 0.549 -536.9708
mode 66 12.14 0.2016 0.555 211.1522
mode 67 12.23 0.2533 0.567 -333.3634
mode 68 12.26 0.4276 0.619 -665.7222
mode 69 12.37 0.3244 0.637 391.4915
mode 70 12.40 0.4637 0.677 -583.3727
mode 71 12.53 0.4499 0.724 628.4362
mode 72 12.60 0.3720 0.730 244.0763
mode 73 12.74 0.3403 0.733 -131.6974
mode 74 12.76 0.4336 0.733 -60.4498
mode 75 12.89 0.3329 0.733 50.8541
mode 76 12.96 0.4168 0.734 102.5723
mode 77 13.07 0.2407 0.757 -441.6196
mode 78 13.16 0.1082 0.761 197.1801
mode 79 13.18 0.3816 0.766 189.0561
mode 80 13.30 0.4479 0.775 -277.0654
mode 81 13.37 0.2911 0.775 69.3736
mode 82 13.44 0.3942 0.777 116.2003
mode 83 13.52 0.4413 0.780 -171.7682
mode 84 13.59 0.3387 0.780 -51.4454
mode 85 13.60 0.3615 0.781 72.6344
mode 86 13.66 0.3130 0.783 -126.8122
mode 87 13.84 0.3659 0.785 -118.1880
mode 88 13.90 0.4088 0.807 -434.3988
mode 89 14.03 0.3086 0.807 82.4265
mode 90 14.12 0.2259 0.808 -66.6840
mode 91 14.18 0.3472 0.811 -158.6056
mode 92 14.22 0.4383 0.842 -517.9071
mode 93 14.26 0.3192 0.847 194.7957
mode 94 14.32 0.2411 0.850 169.2347
mode 95 14.44 0.3732 0.854 175.9082
mode 96 14.46 0.4048 0.859 221.7021
mode 97 14.49 0.3268 0.859 -45.5405
mode 98 14.54 0.3863 0.861 -129.3692
mode 99 14.61 0.4336 0.861 32.8110
mode 100 14.63 0.4407 0.866 -190.2590
mode 101 14.70 0.4450 0.869 177.7726
mode 102 14.89 0.3118 0.869 17.5486
mode 103 14.93 0.3048 0.876 229.7400
mode 104 15.01 0.4633 0.876 64.0140
mode 105 15.11 0.3873 0.876 5.3187
mode 106 15.12 0.2961 0.878 -124.3326

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.