CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0465
SER 770.0276
PRO 780.0217
VAL 790.0097
ALA 800.0060
GLY 810.0191
GLN 820.0187
LYS 830.0091
TYR 840.0093
ASP 850.0120
TYR 860.0023
ILE 870.0041
LEU 880.0074
VAL 890.0051
GLY 900.0068
GLY 910.0081
GLY 920.0051
THR 930.0036
ALA 940.0047
ALA 950.0092
CYS 960.0089
VAL 970.0093
LEU 980.0128
ALA 990.0119
ASN 1000.0113
ARG 1010.0092
LEU 1020.0082
SER 1030.0073
ALA 1040.0076
ASP 1050.0197
GLY 1060.0309
SER 1070.0307
LYS 1080.0171
ARG 1090.0086
VAL 1100.0067
LEU 1110.0071
VAL 1120.0086
LEU 1130.0051
GLU 1140.0064
ALA 1150.0063
GLY 1160.0036
PRO 1170.0042
ASP 1180.0053
ASN 1190.0063
THR 1200.0109
SER 1210.0106
ARG 1220.0131
ASP 1230.0034
VAL 1240.0041
LYS 1250.0075
ILE 1260.0047
PRO 1270.0040
ALA 1280.0050
ALA 1290.0048
ILE 1300.0081
THR 1310.0131
ARG 1320.0131
LEU 1330.0110
PHE 1340.0111
ARG 1350.0125
SER 1360.0161
PRO 1370.0113
LEU 1380.0046
ASP 1390.0024
TRP 1400.0045
ASN 1410.0063
LEU 1420.0065
PHE 1430.0048
SER 1440.0062
GLU 1450.0062
LEU 1460.0054
GLN 1470.0050
GLU 1480.0102
GLN 1490.0052
LEU 1500.0052
ALA 1510.0047
GLU 1520.0070
ARG 1530.0052
GLN 1540.0080
ILE 1550.0062
TYR 1560.0050
MET 1570.0033
ALA 1580.0014
ARG 1590.0014
GLY 1600.0023
ARG 1610.0042
LEU 1620.0031
LEU 1630.0034
GLY 1640.0012
GLY 1650.0020
SER 1660.0045
SER 1670.0060
ALA 1680.0061
THR 1690.0068
ASN 1700.0095
ALA 1710.0087
THR 1720.0078
LEU 1730.0049
TYR 1740.0040
HISD 1750.0046
ARG 1760.0085
GLY 1770.0091
ALA 1780.0081
ALA 1790.0068
GLY 1800.0075
ASP 1810.0046
TYR 1820.0073
ASP 1830.0116
ALA 1840.0094
TRP 1850.0125
GLY 1860.0128
VAL 1870.0121
GLU 1880.0091
GLY 1890.0078
TRP 1900.0108
SER 1910.0169
SER 1920.0087
GLU 1930.0214
ASP 1940.0135
VAL 1950.0110
LEU 1960.0094
SER 1970.0070
TRP 1980.0073
PHE 1990.0074
VAL 2000.0110
GLN 2010.0093
ALA 2020.0086
GLU 2030.0075
THR 2040.0054
ASN 2050.0056
ALA 2060.0100
ASP 2070.0121
PHE 2080.0071
GLY 2090.0043
PRO 2100.0121
GLY 2110.0154
ALA 2120.0100
TYR 2130.0110
HISH 2140.0112
GLY 2150.0117
SER 2160.0118
GLY 2170.0090
GLY 2180.0060
PRO 2190.0061
MET 2200.0040
ARG 2210.0038
VAL 2220.0049
GLU 2230.0076
ASN 2240.0052
PRO 2250.0040
ARG 2260.0048
TYR 2270.0036
THR 2280.0026
ASN 2290.0015
LYS 2300.0043
GLN 2310.0062
LEU 2320.0070
HISE 2330.0073
THR 2340.0073
ALA 2350.0067
PHE 2360.0091
PHE 2370.0101
LYS 2380.0106
ALA 2390.0118
ALA 2400.0107
GLU 2410.0117
GLU 2420.0120
VAL 2430.0104
GLY 2440.0102
LEU 2450.0115
THR 2460.0107
PRO 2470.0083
ASN 2480.0125
SER 2490.0154
ASP 2500.0133
PHE 2510.0083
ASN 2520.0092
ASP 2530.0115
TRP 2540.0108
SER 2550.0164
HISE 2560.0171
ASP 2570.0153
HISE 2580.0149
ALA 2590.0147
GLY 2600.0045
TYR 2610.0054
GLY 2620.0066
THR 2630.0010
PHE 2640.0017
GLN 2650.0038
VAL 2660.0069
MET 2670.0069
GLN 2680.0077
ASP 2690.0104
LYS 2700.0097
GLY 2710.0102
THR 2720.0093
ARG 2730.0092
ALA 2740.0091
ASP 2750.0066
MET 2760.0045
TYR 2770.0061
ARG 2780.0097
GLN 2790.0096
TYR 2800.0089
LEU 2810.0132
LYS 2820.0160
PRO 2830.0226
VAL 2840.0167
LEU 2850.0158
GLY 2860.0173
ARG 2870.0050
ARG 2880.0068
ASN 2890.0110
LEU 2900.0105
GLN 2910.0114
VAL 2920.0106
LEU 2930.0071
THR 2940.0081
GLY 2950.0084
ALA 2960.0020
ALA 2970.0007
VAL 2980.0007
THR 2990.0035
LYS 3000.0020
VAL 3010.0015
ASN 3020.0044
ILE 3030.0040
ASP 3040.0052
GLN 3050.0125
ALA 3060.0060
ALA 3070.0150
GLY 3080.0024
LYS 3090.0023
ALA 3100.0045
GLN 3110.0032
ALA 3120.0036
LEU 3130.0048
GLY 3140.0044
VAL 3150.0028
GLU 3160.0038
PHE 3170.0051
SER 3180.0064
THR 3190.0058
ASP 3200.0162
GLY 3210.0189
PRO 3220.0209
THR 3230.0299
GLY 3240.0063
GLU 3250.0167
ARG 3260.0048
LEU 3270.0049
SER 3280.0053
ALA 3290.0059
GLU 3300.0083
LEU 3310.0108
ALA 3320.0236
PRO 3330.0465
GLY 3340.0465
GLY 3350.0117
GLU 3360.0067
VAL 3370.0060
ILE 3380.0064
MET 3390.0064
CYS 3400.0071
ALA 3410.0058
GLY 3420.0032
ALA 3430.0015
VAL 3440.0029
HISD 3450.0027
THR 3460.0040
PRO 3470.0046
PHE 3480.0028
LEU 3490.0024
LEU 3500.0038
LYS 3510.0039
HISE 3520.0028
SER 3530.0038
GLY 3540.0041
VAL 3550.0038
GLY 3560.0028
PRO 3570.0048
SER 3580.0081
ALA 3590.0164
GLU 3600.0131
LEU 3610.0043
LYS 3620.0059
GLU 3630.0148
PHE 3640.0147
GLY 3650.0069
ILE 3660.0094
PRO 3670.0130
VAL 3680.0069
VAL 3690.0071
SER 3700.0045
ASN 3710.0032
LEU 3720.0022
ALA 3730.0036
GLY 3740.0036
VAL 3750.0044
GLY 3760.0049
GLN 3770.0031
ASN 3780.0036
LEU 3790.0029
GLN 3800.0055
ASP 3810.0051
GLN 3820.0059
PRO 3830.0019
ALA 3840.0006
CYS 3850.0002
LEU 3860.0027
THR 3870.0020
ALA 3880.0038
ALA 3890.0080
PRO 3900.0089
VAL 3910.0090
LYS 3920.0066
GLU 3930.0065
LYS 3940.0096
TYR 3950.0141
ASP 3960.0173
GLY 3970.0190
ILE 3980.0081
ALA 3990.0092
ILE 4000.0089
SER 4010.0090
ASP 4020.0082
HISE 4030.0090
ILE 4040.0041
TYR 4050.0087
ASN 4060.0131
GLU 4070.0255
LYS 4080.0078
GLY 4090.0194
GLN 4100.0079
ILE 4110.0042
ARG 4120.0042
LYS 4130.0083
ARG 4140.0095
ALA 4150.0161
ILE 4160.0164
ALA 4170.0145
SER 4180.0155
TYR 4190.0138
LEU 4200.0178
LEU 4210.0129
GLY 4220.0095
GLY 4230.0099
ARG 4240.0117
GLY 4250.0090
GLY 4260.0089
LEU 4270.0090
THR 4280.0054
SER 4290.0029
THR 4300.0048
GLY 4310.0034
CYS 4320.0042
ASP 4330.0038
ARG 4340.0048
GLY 4350.0047
ALA 4360.0042
PHE 4370.0079
VAL 4380.0074
ARG 4390.0075
THR 4400.0123
ALA 4410.0128
GLY 4420.0121
GLN 4430.0155
ALA 4440.0176
LEU 4450.0177
PRO 4460.0088
ASP 4470.0061
LEU 4480.0069
GLN 4490.0042
VAL 4500.0026
ARG 4510.0022
PHE 4520.0063
VAL 4530.0068
PRO 4540.0059
GLY 4550.0080
MET 4560.0076
ALA 4570.0075
LEU 4580.0082
ASP 4590.0068
PRO 4600.0051
ASP 4610.0028
GLY 4620.0033
VAL 4630.0040
SER 4640.0039
THR 4650.0030
TYR 4660.0068
VAL 4670.0084
ARG 4680.0040
PHE 4690.0085
ALA 4700.0197
LYS 4710.0135
PHE 4720.0117
GLN 4730.0198
SER 4740.0194
GLN 4750.0170
GLY 4760.0106
LEU 4770.0116
LYS 4780.0156
TRP 4790.0121
PRO 4800.0095
SER 4810.0067
GLY 4820.0078
ILE 4830.0072
THR 4840.0072
MET 4850.0028
GLN 4860.0030
LEU 4870.0035
ILE 4880.0031
ALA 4890.0047
CYS 4900.0062
ARG 4910.0098
PRO 4920.0101
GLN 4930.0105
SER 4940.0103
THR 4950.0098
GLY 4960.0077
SER 4970.0035
VAL 4980.0044
GLY 4990.0056
LEU 5000.0097
LYS 5010.0168
SER 5020.0147
ALA 5030.0088
ASP 5040.0108
PRO 5050.0081
PHE 5060.0139
ALA 5070.0145
PRO 5080.0127
PRO 5090.0052
LYS 5100.0079
LEU 5110.0056
SER 5120.0054
PRO 5130.0052
GLY 5140.0057
TYR 5150.0070
LEU 5160.0061
THR 5170.0116
ASP 5180.0192
LYS 5190.0075
ASP 5200.0228
GLY 5210.0092
ALA 5220.0069
ASP 5230.0042
LEU 5240.0015
ALA 5250.0008
THR 5260.0024
LEU 5270.0028
ARG 5280.0022
LYS 5290.0056
GLY 5300.0060
ILE 5310.0049
HISE 5320.0068
TRP 5330.0077
ALA 5340.0057
ARG 5350.0064
ASP 5360.0096
VAL 5370.0076
ALA 5380.0024
ARG 5390.0063
SER 5400.0072
SER 5410.0049
ALA 5420.0027
LEU 5430.0035
SER 5440.0046
GLU 5450.0111
TYR 5460.0120
LEU 5470.0090
ASP 5480.0109
GLY 5490.0104
GLU 5500.0075
LEU 5510.0084
PHE 5520.0046
PRO 5530.0030
GLY 5540.0070
SER 5550.0042
GLY 5560.0072
VAL 5570.0026
VAL 5580.0029
SER 5590.0068
ASP 5600.0066
ASP 5610.0087
GLN 5620.0062
ILE 5630.0047
ASP 5640.0056
GLU 5650.0045
TYR 5660.0025
ILE 5670.0028
ARG 5680.0024
ARG 5690.0009
SER 5700.0018
ILE 5710.0022
HISD 5720.0014
SER 5730.0012
SER 5740.0036
ASN 5750.0046
ALA 5760.0054
ILE 5770.0040
THR 5780.0054
GLY 5790.0047
THR 5800.0034
CYS 5810.0044
LYS 5820.0046
MET 5830.0049
GLY 5840.0071
ASN 5850.0084
ALA 5860.0125
GLY 5870.0234
ASP 5880.0138
SER 5890.0093
SER 5900.0061
SER 5910.0048
VAL 5920.0027
VAL 5930.0037
ASP 5940.0043
ASN 5950.0058
GLN 5960.0099
LEU 5970.0106
ARG 5980.0116
VAL 5990.0022
HISE 6000.0031
GLY 6010.0049
VAL 6020.0016
GLU 6030.0027
GLY 6040.0035
LEU 6050.0053
ARG 6060.0065
VAL 6070.0068
VAL 6080.0066
ASP 6090.0045
ALA 6100.0025
SER 6110.0044
VAL 6120.0029
VAL 6130.0056
PRO 6140.0105
LYS 6150.0099
ILE 6160.0102
PRO 6170.0067
GLY 6180.0076
GLY 6190.0081
GLN 6200.0070
THR 6210.0066
GLY 6220.0063
ALA 6230.0038
PRO 6240.0023
VAL 6250.0012
VAL 6260.0057
MET 6270.0049
ILE 6280.0052
ALA 6290.0098
GLU 6300.0082
ARG 6310.0081
ALA 6320.0151
ALA 6330.0151
ALA 6340.0134
LEU 6350.0188
LEU 6360.0172
THR 6370.0169
GLY 6380.0270
LYS 6390.0167
ALA 6400.0146
THR 6410.0220
ILE 6420.0090
GLY 6430.0127
ALA 6440.0228
SER 6450.0049
ALA 6460.0067
ALA 6470.0071
ALA 6480.0202
PRO 6490.0052

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.