CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0292
SER 770.0292
PRO 780.0250
VAL 790.0225
ALA 800.0257
GLY 810.0280
GLN 820.0250
LYS 830.0222
TYR 840.0182
ASP 850.0173
TYR 860.0118
ILE 870.0105
LEU 880.0071
VAL 890.0051
GLY 900.0054
GLY 910.0062
GLY 920.0050
THR 930.0044
ALA 940.0024
ALA 950.0029
CYS 960.0038
VAL 970.0016
LEU 980.0033
ALA 990.0058
ASN 1000.0052
ARG 1010.0057
LEU 1020.0088
SER 1030.0112
ALA 1040.0115
ASP 1050.0155
GLY 1060.0191
SER 1070.0209
LYS 1080.0180
ARG 1090.0180
VAL 1100.0133
LEU 1110.0126
VAL 1120.0099
LEU 1130.0085
GLU 1140.0085
ALA 1150.0102
GLY 1160.0088
PRO 1170.0096
ASP 1180.0089
ASN 1190.0062
THR 1200.0057
SER 1210.0059
ARG 1220.0067
ASP 1230.0059
VAL 1240.0065
LYS 1250.0069
ILE 1260.0070
PRO 1270.0068
ALA 1280.0062
ALA 1290.0064
ILE 1300.0059
THR 1310.0046
ARG 1320.0062
LEU 1330.0072
PHE 1340.0066
ARG 1350.0076
SER 1360.0068
PRO 1370.0079
LEU 1380.0073
ASP 1390.0075
TRP 1400.0087
ASN 1410.0094
LEU 1420.0094
PHE 1430.0107
SER 1440.0108
GLU 1450.0118
LEU 1460.0110
GLN 1470.0093
GLU 1480.0091
GLN 1490.0072
LEU 1500.0051
ALA 1510.0045
GLU 1520.0079
ARG 1530.0078
GLN 1540.0089
ILE 1550.0079
TYR 1560.0081
MET 1570.0081
ALA 1580.0081
ARG 1590.0078
GLY 1600.0077
ARG 1610.0079
LEU 1620.0076
LEU 1630.0063
GLY 1640.0058
GLY 1650.0062
SER 1660.0074
SER 1670.0067
ALA 1680.0069
THR 1690.0076
ASN 1700.0067
ALA 1710.0064
THR 1720.0070
LEU 1730.0065
TYR 1740.0071
HISD 1750.0069
ARG 1760.0073
GLY 1770.0071
ALA 1780.0073
ALA 1790.0070
GLY 1800.0072
ASP 1810.0068
TYR 1820.0058
ASP 1830.0063
ALA 1840.0074
TRP 1850.0083
GLY 1860.0089
VAL 1870.0076
GLU 1880.0096
GLY 1890.0072
TRP 1900.0059
SER 1910.0050
SER 1920.0053
GLU 1930.0046
ASP 1940.0042
VAL 1950.0039
LEU 1960.0050
SER 1970.0050
TRP 1980.0036
PHE 1990.0055
VAL 2000.0064
GLN 2010.0051
ALA 2020.0052
GLU 2030.0077
THR 2040.0092
ASN 2050.0103
ALA 2060.0121
ASP 2070.0124
PHE 2080.0129
GLY 2090.0130
PRO 2100.0124
GLY 2110.0129
ALA 2120.0122
TYR 2130.0105
HISH 2140.0105
GLY 2150.0089
SER 2160.0088
GLY 2170.0089
GLY 2180.0063
PRO 2190.0063
MET 2200.0068
ARG 2210.0089
VAL 2220.0086
GLU 2230.0091
ASN 2240.0082
PRO 2250.0066
ARG 2260.0071
TYR 2270.0055
THR 2280.0033
ASN 2290.0031
LYS 2300.0029
GLN 2310.0050
LEU 2320.0057
HISE 2330.0030
THR 2340.0040
ALA 2350.0064
PHE 2360.0049
PHE 2370.0047
LYS 2380.0071
ALA 2390.0082
ALA 2400.0076
GLU 2410.0086
GLU 2420.0112
VAL 2430.0115
GLY 2440.0118
LEU 2450.0083
THR 2460.0079
PRO 2470.0060
ASN 2480.0068
SER 2490.0077
ASP 2500.0082
PHE 2510.0071
ASN 2520.0084
ASP 2530.0095
TRP 2540.0086
SER 2550.0104
HISE 2560.0100
ASP 2570.0089
HISE 2580.0075
ALA 2590.0061
GLY 2600.0067
TYR 2610.0044
GLY 2620.0040
THR 2630.0050
PHE 2640.0057
GLN 2650.0074
VAL 2660.0075
MET 2670.0080
GLN 2680.0084
ASP 2690.0099
LYS 2700.0102
GLY 2710.0090
THR 2720.0079
ARG 2730.0076
ALA 2740.0081
ASP 2750.0066
MET 2760.0045
TYR 2770.0054
ARG 2780.0063
GLN 2790.0049
TYR 2800.0035
LEU 2810.0051
LYS 2820.0077
PRO 2830.0069
VAL 2840.0091
LEU 2850.0115
GLY 2860.0153
ARG 2870.0166
ARG 2880.0206
ASN 2890.0185
LEU 2900.0145
GLN 2910.0154
VAL 2920.0136
LEU 2930.0131
THR 2940.0130
GLY 2950.0144
ALA 2960.0136
ALA 2970.0112
VAL 2980.0085
THR 2990.0079
LYS 3000.0050
VAL 3010.0059
ASN 3020.0089
ILE 3030.0095
ASP 3040.0121
GLN 3050.0146
ALA 3060.0209
ALA 3070.0254
GLY 3080.0248
LYS 3090.0194
ALA 3100.0154
GLN 3110.0153
ALA 3120.0125
LEU 3130.0148
GLY 3140.0128
VAL 3150.0101
GLU 3160.0112
PHE 3170.0127
SER 3180.0171
THR 3190.0204
ASP 3200.0253
GLY 3210.0234
PRO 3220.0214
THR 3230.0251
GLY 3240.0260
GLU 3250.0251
ARG 3260.0179
LEU 3270.0187
SER 3280.0167
ALA 3290.0168
GLU 3300.0177
LEU 3310.0176
ALA 3320.0215
PRO 3330.0237
GLY 3340.0217
GLY 3350.0162
GLU 3360.0123
VAL 3370.0089
ILE 3380.0050
MET 3390.0016
CYS 3400.0023
ALA 3410.0043
GLY 3420.0053
ALA 3430.0066
VAL 3440.0079
HISD 3450.0065
THR 3460.0044
PRO 3470.0058
PHE 3480.0067
LEU 3490.0036
LEU 3500.0029
LYS 3510.0055
HISE 3520.0037
SER 3530.0010
GLY 3540.0046
VAL 3550.0070
GLY 3560.0099
PRO 3570.0140
SER 3580.0139
ALA 3590.0165
GLU 3600.0148
LEU 3610.0103
LYS 3620.0113
GLU 3630.0135
PHE 3640.0107
GLY 3650.0070
ILE 3660.0044
PRO 3670.0058
VAL 3680.0090
VAL 3690.0101
SER 3700.0123
ASN 3710.0136
LEU 3720.0128
ALA 3730.0149
GLY 3740.0118
VAL 3750.0089
GLY 3760.0100
GLN 3770.0103
ASN 3780.0100
LEU 3790.0098
GLN 3800.0077
ASP 3810.0075
GLN 3820.0072
PRO 3830.0047
ALA 3840.0027
CYS 3850.0011
LEU 3860.0031
THR 3870.0058
ALA 3880.0072
ALA 3890.0104
PRO 3900.0122
VAL 3910.0131
LYS 3920.0172
GLU 3930.0198
LYS 3940.0189
TYR 3950.0158
ASP 3960.0154
GLY 3970.0128
ILE 3980.0095
ALA 3990.0085
ILE 4000.0078
SER 4010.0100
ASP 4020.0118
HISE 4030.0104
ILE 4040.0111
TYR 4050.0139
ASN 4060.0174
GLU 4070.0197
LYS 4080.0217
GLY 4090.0179
GLN 4100.0188
ILE 4110.0169
ARG 4120.0164
LYS 4130.0185
ARG 4140.0146
ALA 4150.0121
ILE 4160.0153
ALA 4170.0156
SER 4180.0116
TYR 4190.0119
LEU 4200.0165
LEU 4210.0168
GLY 4220.0120
GLY 4230.0113
ARG 4240.0082
GLY 4250.0074
GLY 4260.0067
LEU 4270.0084
THR 4280.0072
SER 4290.0055
THR 4300.0046
GLY 4310.0034
CYS 4320.0030
ASP 4330.0041
ARG 4340.0021
GLY 4350.0025
ALA 4360.0041
PHE 4370.0048
VAL 4380.0058
ARG 4390.0074
THR 4400.0088
ALA 4410.0104
GLY 4420.0109
GLN 4430.0104
ALA 4440.0089
LEU 4450.0064
PRO 4460.0065
ASP 4470.0066
LEU 4480.0049
GLN 4490.0043
VAL 4500.0028
ARG 4510.0014
PHE 4520.0019
VAL 4530.0029
PRO 4540.0050
GLY 4550.0074
MET 4560.0083
ALA 4570.0066
LEU 4580.0065
ASP 4590.0052
PRO 4600.0042
ASP 4610.0017
GLY 4620.0024
VAL 4630.0044
SER 4640.0033
THR 4650.0036
TYR 4660.0046
VAL 4670.0057
ARG 4680.0062
PHE 4690.0072
ALA 4700.0091
LYS 4710.0106
PHE 4720.0120
GLN 4730.0136
SER 4740.0162
GLN 4750.0185
GLY 4760.0194
LEU 4770.0180
LYS 4780.0171
TRP 4790.0124
PRO 4800.0124
SER 4810.0117
GLY 4820.0099
ILE 4830.0070
THR 4840.0052
MET 4850.0034
GLN 4860.0013
LEU 4870.0025
ILE 4880.0036
ALA 4890.0047
CYS 4900.0058
ARG 4910.0063
PRO 4920.0067
GLN 4930.0083
SER 4940.0076
THR 4950.0090
GLY 4960.0099
SER 4970.0114
VAL 4980.0108
GLY 4990.0112
LEU 5000.0118
LYS 5010.0152
SER 5020.0139
ALA 5030.0101
ASP 5040.0119
PRO 5050.0105
PHE 5060.0134
ALA 5070.0146
PRO 5080.0158
PRO 5090.0117
LYS 5100.0130
LEU 5110.0121
SER 5120.0113
PRO 5130.0100
GLY 5140.0097
TYR 5150.0072
LEU 5160.0069
THR 5170.0091
ASP 5180.0107
LYS 5190.0094
ASP 5200.0113
GLY 5210.0102
ALA 5220.0093
ASP 5230.0067
LEU 5240.0077
ALA 5250.0096
THR 5260.0079
LEU 5270.0062
ARG 5280.0083
LYS 5290.0094
GLY 5300.0073
ILE 5310.0075
HISE 5320.0104
TRP 5330.0095
ALA 5340.0079
ARG 5350.0106
ASP 5360.0122
VAL 5370.0097
ALA 5380.0099
ARG 5390.0130
SER 5400.0125
SER 5410.0134
ALA 5420.0105
LEU 5430.0098
SER 5440.0128
GLU 5450.0140
TYR 5460.0122
LEU 5470.0127
ASP 5480.0152
GLY 5490.0151
GLU 5500.0123
LEU 5510.0106
PHE 5520.0083
PRO 5530.0091
GLY 5540.0126
SER 5550.0166
GLY 5560.0168
VAL 5570.0144
VAL 5580.0184
SER 5590.0174
ASP 5600.0163
ASP 5610.0131
GLN 5620.0113
ILE 5630.0096
ASP 5640.0080
GLU 5650.0057
TYR 5660.0050
ILE 5670.0039
ARG 5680.0026
ARG 5690.0013
SER 5700.0014
ILE 5710.0024
HISD 5720.0038
SER 5730.0060
SER 5740.0059
ASN 5750.0072
ALA 5760.0075
ILE 5770.0082
THR 5780.0072
GLY 5790.0072
THR 5800.0077
CYS 5810.0060
LYS 5820.0073
MET 5830.0072
GLY 5840.0109
ASN 5850.0136
ALA 5860.0173
GLY 5870.0206
ASP 5880.0184
SER 5890.0168
SER 5900.0147
SER 5910.0119
VAL 5920.0094
VAL 5930.0082
ASP 5940.0098
ASN 5950.0088
GLN 5960.0086
LEU 5970.0068
ARG 5980.0088
VAL 5990.0090
HISE 6000.0127
GLY 6010.0145
VAL 6020.0127
GLU 6030.0149
GLY 6040.0135
LEU 6050.0078
ARG 6060.0058
VAL 6070.0029
VAL 6080.0012
ASP 6090.0026
ALA 6100.0050
SER 6110.0050
VAL 6120.0046
VAL 6130.0055
PRO 6140.0054
LYS 6150.0066
ILE 6160.0070
PRO 6170.0065
GLY 6180.0066
GLY 6190.0067
GLN 6200.0065
THR 6210.0065
GLY 6220.0065
ALA 6230.0058
PRO 6240.0052
VAL 6250.0043
VAL 6260.0032
MET 6270.0032
ILE 6280.0028
ALA 6290.0012
GLU 6300.0014
ARG 6310.0029
ALA 6320.0046
ALA 6330.0053
ALA 6340.0073
LEU 6350.0100
LEU 6360.0098
THR 6370.0117
GLY 6380.0126
LYS 6390.0121
ALA 6400.0118
THR 6410.0107
ILE 6420.0108
GLY 6430.0123
ALA 6440.0096
SER 6450.0052
ALA 6460.0108
ALA 6470.0167
ALA 6480.0127
PRO 6490.0160

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.