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***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0274
SER 770.0130
PRO 780.0099
VAL 790.0118
ALA 800.0164
GLY 810.0193
GLN 820.0170
LYS 830.0165
TYR 840.0129
ASP 850.0130
TYR 860.0082
ILE 870.0065
LEU 880.0031
VAL 890.0024
GLY 900.0022
GLY 910.0035
GLY 920.0057
THR 930.0064
ALA 940.0049
ALA 950.0035
CYS 960.0052
VAL 970.0058
LEU 980.0046
ALA 990.0050
ASN 1000.0074
ARG 1010.0079
LEU 1020.0075
SER 1030.0095
ALA 1040.0144
ASP 1050.0165
GLY 1060.0181
SER 1070.0188
LYS 1080.0150
ARG 1090.0132
VAL 1100.0085
LEU 1110.0060
VAL 1120.0024
LEU 1130.0014
GLU 1140.0029
ALA 1150.0061
GLY 1160.0080
PRO 1170.0085
ASP 1180.0086
ASN 1190.0098
THR 1200.0116
SER 1210.0126
ARG 1220.0127
ASP 1230.0116
VAL 1240.0106
LYS 1250.0106
ILE 1260.0102
PRO 1270.0086
ALA 1280.0078
ALA 1290.0091
ILE 1300.0088
THR 1310.0083
ARG 1320.0101
LEU 1330.0103
PHE 1340.0093
ARG 1350.0102
SER 1360.0108
PRO 1370.0108
LEU 1380.0102
ASP 1390.0098
TRP 1400.0084
ASN 1410.0089
LEU 1420.0087
PHE 1430.0076
SER 1440.0077
GLU 1450.0077
LEU 1460.0084
GLN 1470.0080
GLU 1480.0101
GLN 1490.0117
LEU 1500.0098
ALA 1510.0111
GLU 1520.0097
ARG 1530.0074
GLN 1540.0064
ILE 1550.0073
TYR 1560.0077
MET 1570.0078
ALA 1580.0087
ARG 1590.0088
GLY 1600.0089
ARG 1610.0084
LEU 1620.0079
LEU 1630.0071
GLY 1640.0077
GLY 1650.0079
SER 1660.0087
SER 1670.0088
ALA 1680.0092
THR 1690.0094
ASN 1700.0081
ALA 1710.0073
THR 1720.0075
LEU 1730.0059
TYR 1740.0061
HISD 1750.0060
ARG 1760.0070
GLY 1770.0073
ALA 1780.0077
ALA 1790.0090
GLY 1800.0093
ASP 1810.0089
TYR 1820.0087
ASP 1830.0094
ALA 1840.0095
TRP 1850.0088
GLY 1860.0084
VAL 1870.0068
GLU 1880.0057
GLY 1890.0061
TRP 1900.0070
SER 1910.0081
SER 1920.0085
GLU 1930.0086
ASP 1940.0075
VAL 1950.0072
LEU 1960.0075
SER 1970.0075
TRP 1980.0066
PHE 1990.0071
VAL 2000.0066
GLN 2010.0065
ALA 2020.0065
GLU 2030.0062
THR 2040.0062
ASN 2050.0057
ALA 2060.0053
ASP 2070.0053
PHE 2080.0053
GLY 2090.0056
PRO 2100.0056
GLY 2110.0051
ALA 2120.0049
TYR 2130.0051
HISH 2140.0053
GLY 2150.0061
SER 2160.0063
GLY 2170.0062
GLY 2180.0065
PRO 2190.0067
MET 2200.0070
ARG 2210.0064
VAL 2220.0060
GLU 2230.0059
ASN 2240.0055
PRO 2250.0059
ARG 2260.0072
TYR 2270.0078
THR 2280.0094
ASN 2290.0093
LYS 2300.0156
GLN 2310.0172
LEU 2320.0138
HISE 2330.0110
THR 2340.0154
ALA 2350.0155
PHE 2360.0107
PHE 2370.0117
LYS 2380.0149
ALA 2390.0132
ALA 2400.0104
GLU 2410.0128
GLU 2420.0151
VAL 2430.0118
GLY 2440.0104
LEU 2450.0063
THR 2460.0078
PRO 2470.0086
ASN 2480.0060
SER 2490.0065
ASP 2500.0063
PHE 2510.0054
ASN 2520.0063
ASP 2530.0070
TRP 2540.0071
SER 2550.0073
HISE 2560.0061
ASP 2570.0071
HISE 2580.0060
ALA 2590.0043
GLY 2600.0050
TYR 2610.0051
GLY 2620.0067
THR 2630.0038
PHE 2640.0041
GLN 2650.0054
VAL 2660.0061
MET 2670.0071
GLN 2680.0076
ASP 2690.0075
LYS 2700.0088
GLY 2710.0086
THR 2720.0092
ARG 2730.0088
ALA 2740.0087
ASP 2750.0087
MET 2760.0076
TYR 2770.0079
ARG 2780.0083
GLN 2790.0080
TYR 2800.0077
LEU 2810.0073
LYS 2820.0087
PRO 2830.0107
VAL 2840.0110
LEU 2850.0086
GLY 2860.0096
ARG 2870.0124
ARG 2880.0138
ASN 2890.0122
LEU 2900.0084
GLN 2910.0064
VAL 2920.0030
LEU 2930.0010
THR 2940.0031
GLY 2950.0057
ALA 2960.0045
ALA 2970.0064
VAL 2980.0072
THR 2990.0103
LYS 3000.0106
VAL 3010.0100
ASN 3020.0142
ILE 3030.0157
ASP 3040.0199
GLN 3050.0217
ALA 3060.0235
ALA 3070.0252
GLY 3080.0206
LYS 3090.0166
ALA 3100.0169
GLN 3110.0172
ALA 3120.0141
LEU 3130.0159
GLY 3140.0126
VAL 3150.0102
GLU 3160.0111
PHE 3170.0095
SER 3180.0100
THR 3190.0078
ASP 3200.0120
GLY 3210.0137
PRO 3220.0166
THR 3230.0208
GLY 3240.0175
GLU 3250.0172
ARG 3260.0140
LEU 3270.0125
SER 3280.0130
ALA 3290.0123
GLU 3300.0149
LEU 3310.0146
ALA 3320.0176
PRO 3330.0213
GLY 3340.0185
GLY 3350.0129
GLU 3360.0094
VAL 3370.0073
ILE 3380.0027
MET 3390.0019
CYS 3400.0017
ALA 3410.0036
GLY 3420.0051
ALA 3430.0061
VAL 3440.0066
HISD 3450.0052
THR 3460.0038
PRO 3470.0058
PHE 3480.0074
LEU 3490.0060
LEU 3500.0072
LYS 3510.0100
HISE 3520.0104
SER 3530.0117
GLY 3540.0140
VAL 3550.0115
GLY 3560.0125
PRO 3570.0164
SER 3580.0195
ALA 3590.0239
GLU 3600.0215
LEU 3610.0193
LYS 3620.0237
GLU 3630.0250
PHE 3640.0208
GLY 3650.0230
ILE 3660.0193
PRO 3670.0205
VAL 3680.0189
VAL 3690.0164
SER 3700.0137
ASN 3710.0136
LEU 3720.0109
ALA 3730.0127
GLY 3740.0085
VAL 3750.0073
GLY 3760.0084
GLN 3770.0076
ASN 3780.0082
LEU 3790.0086
GLN 3800.0086
ASP 3810.0081
GLN 3820.0076
PRO 3830.0068
ALA 3840.0047
CYS 3850.0048
LEU 3860.0064
THR 3870.0084
ALA 3880.0096
ALA 3890.0140
PRO 3900.0155
VAL 3910.0166
LYS 3920.0226
GLU 3930.0274
LYS 3940.0235
TYR 3950.0195
ASP 3960.0157
GLY 3970.0124
ILE 3980.0117
ALA 3990.0078
ILE 4000.0033
SER 4010.0032
ASP 4020.0048
HISE 4030.0046
ILE 4040.0025
TYR 4050.0022
ASN 4060.0024
GLU 4070.0075
LYS 4080.0091
GLY 4090.0080
GLN 4100.0073
ILE 4110.0068
ARG 4120.0058
LYS 4130.0145
ARG 4140.0147
ALA 4150.0098
ILE 4160.0142
ALA 4170.0178
SER 4180.0152
TYR 4190.0134
LEU 4200.0185
LEU 4210.0207
GLY 4220.0165
GLY 4230.0135
ARG 4240.0106
GLY 4250.0083
GLY 4260.0047
LEU 4270.0074
THR 4280.0073
SER 4290.0054
THR 4300.0045
GLY 4310.0020
CYS 4320.0026
ASP 4330.0035
ARG 4340.0032
GLY 4350.0021
ALA 4360.0027
PHE 4370.0028
VAL 4380.0018
ARG 4390.0026
THR 4400.0020
ALA 4410.0048
GLY 4420.0065
GLN 4430.0083
ALA 4440.0082
LEU 4450.0070
PRO 4460.0045
ASP 4470.0043
LEU 4480.0028
GLN 4490.0023
VAL 4500.0008
ARG 4510.0008
PHE 4520.0039
VAL 4530.0034
PRO 4540.0058
GLY 4550.0064
MET 4560.0086
ALA 4570.0086
LEU 4580.0099
ASP 4590.0105
PRO 4600.0094
ASP 4610.0067
GLY 4620.0041
VAL 4630.0069
SER 4640.0091
THR 4650.0070
TYR 4660.0064
VAL 4670.0095
ARG 4680.0093
PHE 4690.0068
ALA 4700.0094
LYS 4710.0123
PHE 4720.0103
GLN 4730.0101
SER 4740.0147
GLN 4750.0164
GLY 4760.0127
LEU 4770.0125
LYS 4780.0106
TRP 4790.0085
PRO 4800.0109
SER 4810.0104
GLY 4820.0112
ILE 4830.0088
THR 4840.0071
MET 4850.0047
GLN 4860.0029
LEU 4870.0030
ILE 4880.0041
ALA 4890.0051
CYS 4900.0062
ARG 4910.0082
PRO 4920.0085
GLN 4930.0100
SER 4940.0093
THR 4950.0089
GLY 4960.0083
SER 4970.0079
VAL 4980.0076
GLY 4990.0077
LEU 5000.0110
LYS 5010.0127
SER 5020.0122
ALA 5030.0140
ASP 5040.0142
PRO 5050.0124
PHE 5060.0110
ALA 5070.0120
PRO 5080.0111
PRO 5090.0068
LYS 5100.0081
LEU 5110.0086
SER 5120.0074
PRO 5130.0079
GLY 5140.0087
TYR 5150.0089
LEU 5160.0092
THR 5170.0115
ASP 5180.0139
LYS 5190.0141
ASP 5200.0132
GLY 5210.0111
ALA 5220.0085
ASP 5230.0076
LEU 5240.0088
ALA 5250.0072
THR 5260.0049
LEU 5270.0056
ARG 5280.0075
LYS 5290.0051
GLY 5300.0046
ILE 5310.0076
HISE 5320.0088
TRP 5330.0074
ALA 5340.0086
ARG 5350.0116
ASP 5360.0124
VAL 5370.0115
ALA 5380.0131
ARG 5390.0169
SER 5400.0169
SER 5410.0198
ALA 5420.0186
LEU 5430.0160
SER 5440.0188
GLU 5450.0224
TYR 5460.0190
LEU 5470.0183
ASP 5480.0207
GLY 5490.0204
GLU 5500.0173
LEU 5510.0153
PHE 5520.0129
PRO 5530.0142
GLY 5540.0190
SER 5550.0242
GLY 5560.0256
VAL 5570.0208
VAL 5580.0241
SER 5590.0230
ASP 5600.0180
ASP 5610.0196
GLN 5620.0193
ILE 5630.0136
ASP 5640.0133
GLU 5650.0158
TYR 5660.0121
ILE 5670.0098
ARG 5680.0118
ARG 5690.0105
SER 5700.0077
ILE 5710.0075
HISD 5720.0066
SER 5730.0072
SER 5740.0062
ASN 5750.0080
ALA 5760.0081
ILE 5770.0081
THR 5780.0078
GLY 5790.0071
THR 5800.0064
CYS 5810.0052
LYS 5820.0056
MET 5830.0044
GLY 5840.0047
ASN 5850.0041
ALA 5860.0033
GLY 5870.0052
ASP 5880.0067
SER 5890.0084
SER 5900.0084
SER 5910.0057
VAL 5920.0046
VAL 5930.0024
ASP 5940.0011
ASN 5950.0020
GLN 5960.0027
LEU 5970.0007
ARG 5980.0028
VAL 5990.0045
HISE 6000.0067
GLY 6010.0108
VAL 6020.0114
GLU 6030.0119
GLY 6040.0106
LEU 6050.0061
ARG 6060.0030
VAL 6070.0009
VAL 6080.0028
ASP 6090.0044
ALA 6100.0062
SER 6110.0056
VAL 6120.0051
VAL 6130.0068
PRO 6140.0079
LYS 6150.0086
ILE 6160.0085
PRO 6170.0082
GLY 6180.0076
GLY 6190.0071
GLN 6200.0073
THR 6210.0076
GLY 6220.0076
ALA 6230.0074
PRO 6240.0073
VAL 6250.0067
VAL 6260.0067
MET 6270.0067
ILE 6280.0057
ALA 6290.0049
GLU 6300.0060
ARG 6310.0054
ALA 6320.0035
ALA 6330.0053
ALA 6340.0066
LEU 6350.0060
LEU 6360.0070
THR 6370.0099
GLY 6380.0094
LYS 6390.0099
ALA 6400.0069
THR 6410.0063
ILE 6420.0044
GLY 6430.0043
ALA 6440.0033
SER 6450.0038
ALA 6460.0039
ALA 6470.0054
ALA 6480.0034
PRO 6490.0056

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.