CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 15  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0386
SER 770.0162
PRO 780.0125
VAL 790.0087
ALA 800.0121
GLY 810.0106
GLN 820.0064
LYS 830.0042
TYR 840.0033
ASP 850.0056
TYR 860.0057
ILE 870.0041
LEU 880.0053
VAL 890.0049
GLY 900.0060
GLY 910.0069
GLY 920.0060
THR 930.0060
ALA 940.0062
ALA 950.0070
CYS 960.0069
VAL 970.0071
LEU 980.0086
ALA 990.0085
ASN 1000.0092
ARG 1010.0099
LEU 1020.0101
SER 1030.0106
ALA 1040.0139
ASP 1050.0149
GLY 1060.0147
SER 1070.0122
LYS 1080.0103
ARG 1090.0069
VAL 1100.0067
LEU 1110.0054
VAL 1120.0062
LEU 1130.0063
GLU 1140.0072
ALA 1150.0073
GLY 1160.0062
PRO 1170.0054
ASP 1180.0052
ASN 1190.0033
THR 1200.0026
SER 1210.0031
ARG 1220.0053
ASP 1230.0044
VAL 1240.0041
LYS 1250.0043
ILE 1260.0049
PRO 1270.0050
ALA 1280.0063
ALA 1290.0062
ILE 1300.0061
THR 1310.0075
ARG 1320.0078
LEU 1330.0081
PHE 1340.0039
ARG 1350.0044
SER 1360.0044
PRO 1370.0037
LEU 1380.0040
ASP 1390.0042
TRP 1400.0039
ASN 1410.0041
LEU 1420.0040
PHE 1430.0056
SER 1440.0062
GLU 1450.0078
LEU 1460.0120
GLN 1470.0104
GLU 1480.0131
GLN 1490.0102
LEU 1500.0091
ALA 1510.0110
GLU 1520.0132
ARG 1530.0110
GLN 1540.0093
ILE 1550.0036
TYR 1560.0021
MET 1570.0011
ALA 1580.0024
ARG 1590.0022
GLY 1600.0022
ARG 1610.0048
LEU 1620.0049
LEU 1630.0060
GLY 1640.0048
GLY 1650.0045
SER 1660.0042
SER 1670.0046
ALA 1680.0036
THR 1690.0036
ASN 1700.0044
ALA 1710.0049
THR 1720.0046
LEU 1730.0045
TYR 1740.0045
HISD 1750.0045
ARG 1760.0032
GLY 1770.0035
ALA 1780.0052
ALA 1790.0045
GLY 1800.0059
ASP 1810.0041
TYR 1820.0033
ASP 1830.0049
ALA 1840.0056
TRP 1850.0049
GLY 1860.0058
VAL 1870.0067
GLU 1880.0083
GLY 1890.0076
TRP 1900.0060
SER 1910.0049
SER 1920.0030
GLU 1930.0032
ASP 1940.0042
VAL 1950.0027
LEU 1960.0010
SER 1970.0012
TRP 1980.0025
PHE 1990.0015
VAL 2000.0013
GLN 2010.0026
ALA 2020.0036
GLU 2030.0041
THR 2040.0078
ASN 2050.0098
ALA 2060.0148
ASP 2070.0161
PHE 2080.0159
GLY 2090.0148
PRO 2100.0118
GLY 2110.0126
ALA 2120.0120
TYR 2130.0098
HISH 2140.0096
GLY 2150.0059
SER 2160.0060
GLY 2170.0080
GLY 2180.0042
PRO 2190.0053
MET 2200.0040
ARG 2210.0060
VAL 2220.0060
GLU 2230.0078
ASN 2240.0087
PRO 2250.0086
ARG 2260.0091
TYR 2270.0084
THR 2280.0068
ASN 2290.0053
LYS 2300.0058
GLN 2310.0045
LEU 2320.0038
HISE 2330.0043
THR 2340.0040
ALA 2350.0027
PHE 2360.0038
PHE 2370.0041
LYS 2380.0035
ALA 2390.0036
ALA 2400.0034
GLU 2410.0033
GLU 2420.0040
VAL 2430.0043
GLY 2440.0048
LEU 2450.0067
THR 2460.0087
PRO 2470.0100
ASN 2480.0127
SER 2490.0133
ASP 2500.0114
PHE 2510.0089
ASN 2520.0086
ASP 2530.0109
TRP 2540.0097
SER 2550.0136
HISE 2560.0152
ASP 2570.0132
HISE 2580.0105
ALA 2590.0098
GLY 2600.0084
TYR 2610.0079
GLY 2620.0091
THR 2630.0082
PHE 2640.0076
GLN 2650.0076
VAL 2660.0056
MET 2670.0049
GLN 2680.0058
ASP 2690.0072
LYS 2700.0096
GLY 2710.0075
THR 2720.0057
ARG 2730.0045
ALA 2740.0047
ASP 2750.0045
MET 2760.0050
TYR 2770.0047
ARG 2780.0064
GLN 2790.0053
TYR 2800.0064
LEU 2810.0073
LYS 2820.0071
PRO 2830.0080
VAL 2840.0112
LEU 2850.0101
GLY 2860.0115
ARG 2870.0127
ARG 2880.0127
ASN 2890.0098
LEU 2900.0078
GLN 2910.0065
VAL 2920.0076
LEU 2930.0085
THR 2940.0096
GLY 2950.0098
ALA 2960.0113
ALA 2970.0096
VAL 2980.0061
THR 2990.0047
LYS 3000.0018
VAL 3010.0017
ASN 3020.0042
ILE 3030.0062
ASP 3040.0098
GLN 3050.0146
ALA 3060.0204
ALA 3070.0264
GLY 3080.0226
LYS 3090.0153
ALA 3100.0118
GLN 3110.0092
ALA 3120.0056
LEU 3130.0070
GLY 3140.0054
VAL 3150.0040
GLU 3160.0068
PHE 3170.0091
SER 3180.0148
THR 3190.0177
ASP 3200.0311
GLY 3210.0310
PRO 3220.0286
THR 3230.0386
GLY 3240.0368
GLU 3250.0324
ARG 3260.0172
LEU 3270.0145
SER 3280.0111
ALA 3290.0068
GLU 3300.0065
LEU 3310.0051
ALA 3320.0064
PRO 3330.0110
GLY 3340.0110
GLY 3350.0041
GLU 3360.0043
VAL 3370.0033
ILE 3380.0058
MET 3390.0060
CYS 3400.0071
ALA 3410.0058
GLY 3420.0062
ALA 3430.0065
VAL 3440.0058
HISD 3450.0058
THR 3460.0061
PRO 3470.0077
PHE 3480.0072
LEU 3490.0052
LEU 3500.0060
LYS 3510.0071
HISE 3520.0046
SER 3530.0039
GLY 3540.0072
VAL 3550.0087
GLY 3560.0112
PRO 3570.0148
SER 3580.0154
ALA 3590.0197
GLU 3600.0168
LEU 3610.0130
LYS 3620.0162
GLU 3630.0161
PHE 3640.0116
GLY 3650.0116
ILE 3660.0097
PRO 3670.0118
VAL 3680.0122
VAL 3690.0108
SER 3700.0119
ASN 3710.0121
LEU 3720.0118
ALA 3730.0138
GLY 3740.0111
VAL 3750.0099
GLY 3760.0100
GLN 3770.0080
ASN 3780.0076
LEU 3790.0076
GLN 3800.0036
ASP 3810.0036
GLN 3820.0030
PRO 3830.0044
ALA 3840.0047
CYS 3850.0054
LEU 3860.0054
THR 3870.0046
ALA 3880.0036
ALA 3890.0020
PRO 3900.0040
VAL 3910.0068
LYS 3920.0096
GLU 3930.0149
LYS 3940.0164
TYR 3950.0142
ASP 3960.0168
GLY 3970.0158
ILE 3980.0088
ALA 3990.0078
ILE 4000.0095
SER 4010.0127
ASP 4020.0139
HISE 4030.0126
ILE 4040.0124
TYR 4050.0184
ASN 4060.0237
GLU 4070.0312
LYS 4080.0353
GLY 4090.0275
GLN 4100.0257
ILE 4110.0178
ARG 4120.0150
LYS 4130.0088
ARG 4140.0163
ALA 4150.0101
ILE 4160.0085
ALA 4170.0149
SER 4180.0152
TYR 4190.0113
LEU 4200.0168
LEU 4210.0225
GLY 4220.0164
GLY 4230.0114
ARG 4240.0106
GLY 4250.0089
GLY 4260.0085
LEU 4270.0070
THR 4280.0068
SER 4290.0070
THR 4300.0073
GLY 4310.0065
CYS 4320.0066
ASP 4330.0069
ARG 4340.0070
GLY 4350.0070
ALA 4360.0069
PHE 4370.0080
VAL 4380.0082
ARG 4390.0088
THR 4400.0077
ALA 4410.0082
GLY 4420.0111
GLN 4430.0175
ALA 4440.0144
LEU 4450.0102
PRO 4460.0082
ASP 4470.0065
LEU 4480.0054
GLN 4490.0056
VAL 4500.0055
ARG 4510.0056
PHE 4520.0041
VAL 4530.0052
PRO 4540.0049
GLY 4550.0059
MET 4560.0046
ALA 4570.0052
LEU 4580.0040
ASP 4590.0054
PRO 4600.0060
ASP 4610.0043
GLY 4620.0041
VAL 4630.0042
SER 4640.0074
THR 4650.0059
TYR 4660.0068
VAL 4670.0118
ARG 4680.0111
PHE 4690.0107
ALA 4700.0169
LYS 4710.0196
PHE 4720.0186
GLN 4730.0231
SER 4740.0292
GLN 4750.0326
GLY 4760.0304
LEU 4770.0272
LYS 4780.0242
TRP 4790.0127
PRO 4800.0105
SER 4810.0097
GLY 4820.0043
ILE 4830.0030
THR 4840.0034
MET 4850.0043
GLN 4860.0048
LEU 4870.0052
ILE 4880.0043
ALA 4890.0044
CYS 4900.0050
ARG 4910.0050
PRO 4920.0047
GLN 4930.0064
SER 4940.0070
THR 4950.0070
GLY 4960.0080
SER 4970.0087
VAL 4980.0088
GLY 4990.0094
LEU 5000.0105
LYS 5010.0118
SER 5020.0095
ALA 5030.0058
ASP 5040.0039
PRO 5050.0051
PHE 5060.0092
ALA 5070.0088
PRO 5080.0128
PRO 5090.0084
LYS 5100.0093
LEU 5110.0081
SER 5120.0079
PRO 5130.0067
GLY 5140.0073
TYR 5150.0065
LEU 5160.0067
THR 5170.0086
ASP 5180.0098
LYS 5190.0089
ASP 5200.0075
GLY 5210.0074
ALA 5220.0067
ASP 5230.0053
LEU 5240.0055
ALA 5250.0046
THR 5260.0047
LEU 5270.0046
ARG 5280.0054
LYS 5290.0048
GLY 5300.0048
ILE 5310.0064
HISE 5320.0074
TRP 5330.0060
ALA 5340.0060
ARG 5350.0072
ASP 5360.0060
VAL 5370.0044
ALA 5380.0044
ARG 5390.0064
SER 5400.0068
SER 5410.0083
ALA 5420.0055
LEU 5430.0042
SER 5440.0063
GLU 5450.0087
TYR 5460.0070
LEU 5470.0048
ASP 5480.0060
GLY 5490.0060
GLU 5500.0052
LEU 5510.0048
PHE 5520.0061
PRO 5530.0080
GLY 5540.0110
SER 5550.0226
GLY 5560.0307
VAL 5570.0241
VAL 5580.0334
SER 5590.0315
ASP 5600.0198
ASP 5610.0198
GLN 5620.0212
ILE 5630.0116
ASP 5640.0104
GLU 5650.0145
TYR 5660.0100
ILE 5670.0077
ARG 5680.0092
ARG 5690.0087
SER 5700.0076
ILE 5710.0065
HISD 5720.0039
SER 5730.0033
SER 5740.0031
ASN 5750.0033
ALA 5760.0027
ILE 5770.0032
THR 5780.0059
GLY 5790.0059
THR 5800.0071
CYS 5810.0081
LYS 5820.0079
MET 5830.0074
GLY 5840.0073
ASN 5850.0079
ALA 5860.0094
GLY 5870.0082
ASP 5880.0092
SER 5890.0111
SER 5900.0104
SER 5910.0092
VAL 5920.0086
VAL 5930.0080
ASP 5940.0084
ASN 5950.0089
GLN 5960.0098
LEU 5970.0081
ARG 5980.0071
VAL 5990.0074
HISE 6000.0094
GLY 6010.0096
VAL 6020.0084
GLU 6030.0068
GLY 6040.0033
LEU 6050.0048
ARG 6060.0066
VAL 6070.0074
VAL 6080.0074
ASP 6090.0070
ALA 6100.0066
SER 6110.0072
VAL 6120.0071
VAL 6130.0059
PRO 6140.0051
LYS 6150.0031
ILE 6160.0027
PRO 6170.0018
GLY 6180.0030
GLY 6190.0032
GLN 6200.0016
THR 6210.0007
GLY 6220.0022
ALA 6230.0024
PRO 6240.0026
VAL 6250.0047
VAL 6260.0055
MET 6270.0050
ILE 6280.0056
ALA 6290.0078
GLU 6300.0075
ARG 6310.0076
ALA 6320.0092
ALA 6330.0098
ALA 6340.0109
LEU 6350.0109
LEU 6360.0104
THR 6370.0116
GLY 6380.0154
LYS 6390.0153
ALA 6400.0141
THR 6410.0138
ILE 6420.0138
GLY 6430.0169
ALA 6440.0265
SER 6450.0253
ALA 6460.0238
ALA 6470.0193
ALA 6480.0030
PRO 6490.0097

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.