CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 17  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0704
SER 770.0153
PRO 780.0138
VAL 790.0103
ALA 800.0107
GLY 810.0124
GLN 820.0117
LYS 830.0097
TYR 840.0076
ASP 850.0068
TYR 860.0042
ILE 870.0041
LEU 880.0036
VAL 890.0030
GLY 900.0029
GLY 910.0031
GLY 920.0035
THR 930.0029
ALA 940.0022
ALA 950.0033
CYS 960.0040
VAL 970.0033
LEU 980.0025
ALA 990.0038
ASN 1000.0038
ARG 1010.0028
LEU 1020.0031
SER 1030.0049
ALA 1040.0044
ASP 1050.0050
GLY 1060.0079
SER 1070.0091
LYS 1080.0076
ARG 1090.0083
VAL 1100.0061
LEU 1110.0061
VAL 1120.0057
LEU 1130.0047
GLU 1140.0041
ALA 1150.0045
GLY 1160.0049
PRO 1170.0055
ASP 1180.0053
ASN 1190.0073
THR 1200.0093
SER 1210.0103
ARG 1220.0097
ASP 1230.0095
VAL 1240.0088
LYS 1250.0100
ILE 1260.0086
PRO 1270.0089
ALA 1280.0072
ALA 1290.0071
ILE 1300.0074
THR 1310.0056
ARG 1320.0054
LEU 1330.0074
PHE 1340.0076
ARG 1350.0090
SER 1360.0099
PRO 1370.0102
LEU 1380.0079
ASP 1390.0067
TRP 1400.0055
ASN 1410.0069
LEU 1420.0070
PHE 1430.0103
SER 1440.0101
GLU 1450.0107
LEU 1460.0165
GLN 1470.0143
GLU 1480.0166
GLN 1490.0138
LEU 1500.0122
ALA 1510.0137
GLU 1520.0169
ARG 1530.0154
GLN 1540.0140
ILE 1550.0096
TYR 1560.0094
MET 1570.0084
ALA 1580.0057
ARG 1590.0053
GLY 1600.0054
ARG 1610.0047
LEU 1620.0046
LEU 1630.0038
GLY 1640.0045
GLY 1650.0049
SER 1660.0053
SER 1670.0058
ALA 1680.0067
THR 1690.0068
ASN 1700.0085
ALA 1710.0084
THR 1720.0080
LEU 1730.0082
TYR 1740.0064
HISD 1750.0037
ARG 1760.0036
GLY 1770.0022
ALA 1780.0051
ALA 1790.0075
GLY 1800.0077
ASP 1810.0057
TYR 1820.0066
ASP 1830.0095
ALA 1840.0092
TRP 1850.0075
GLY 1860.0093
VAL 1870.0080
GLU 1880.0094
GLY 1890.0090
TRP 1900.0072
SER 1910.0107
SER 1920.0099
GLU 1930.0125
ASP 1940.0110
VAL 1950.0090
LEU 1960.0112
SER 1970.0121
TRP 1980.0093
PHE 1990.0088
VAL 2000.0119
GLN 2010.0104
ALA 2020.0089
GLU 2030.0101
THR 2040.0141
ASN 2050.0168
ALA 2060.0212
ASP 2070.0225
PHE 2080.0232
GLY 2090.0255
PRO 2100.0241
GLY 2110.0255
ALA 2120.0236
TYR 2130.0179
HISH 2140.0182
GLY 2150.0151
SER 2160.0161
GLY 2170.0156
GLY 2180.0104
PRO 2190.0101
MET 2200.0100
ARG 2210.0114
VAL 2220.0109
GLU 2230.0109
ASN 2240.0103
PRO 2250.0093
ARG 2260.0093
TYR 2270.0103
THR 2280.0111
ASN 2290.0104
LYS 2300.0133
GLN 2310.0105
LEU 2320.0077
HISE 2330.0079
THR 2340.0087
ALA 2350.0058
PHE 2360.0056
PHE 2370.0068
LYS 2380.0058
ALA 2390.0048
ALA 2400.0061
GLU 2410.0065
GLU 2420.0051
VAL 2430.0059
GLY 2440.0071
LEU 2450.0053
THR 2460.0051
PRO 2470.0054
ASN 2480.0046
SER 2490.0080
ASP 2500.0072
PHE 2510.0035
ASN 2520.0056
ASP 2530.0092
TRP 2540.0100
SER 2550.0139
HISE 2560.0102
ASP 2570.0030
HISE 2580.0016
ALA 2590.0019
GLY 2600.0052
TYR 2610.0060
GLY 2620.0065
THR 2630.0073
PHE 2640.0078
GLN 2650.0091
VAL 2660.0091
MET 2670.0095
GLN 2680.0102
ASP 2690.0115
LYS 2700.0113
GLY 2710.0096
THR 2720.0103
ARG 2730.0096
ALA 2740.0098
ASP 2750.0081
MET 2760.0065
TYR 2770.0071
ARG 2780.0101
GLN 2790.0089
TYR 2800.0071
LEU 2810.0058
LYS 2820.0080
PRO 2830.0080
VAL 2840.0059
LEU 2850.0075
GLY 2860.0087
ARG 2870.0094
ARG 2880.0113
ASN 2890.0092
LEU 2900.0072
GLN 2910.0079
VAL 2920.0078
LEU 2930.0068
THR 2940.0065
GLY 2950.0069
ALA 2960.0092
ALA 2970.0081
VAL 2980.0059
THR 2990.0090
LYS 3000.0065
VAL 3010.0037
ASN 3020.0039
ILE 3030.0044
ASP 3040.0062
GLN 3050.0104
ALA 3060.0127
ALA 3070.0184
GLY 3080.0146
LYS 3090.0094
ALA 3100.0074
GLN 3110.0055
ALA 3120.0022
LEU 3130.0014
GLY 3140.0011
VAL 3150.0025
GLU 3160.0057
PHE 3170.0083
SER 3180.0127
THR 3190.0159
ASP 3200.0240
GLY 3210.0283
PRO 3220.0292
THR 3230.0367
GLY 3240.0293
GLU 3250.0194
ARG 3260.0127
LEU 3270.0077
SER 3280.0029
ALA 3290.0049
GLU 3300.0045
LEU 3310.0050
ALA 3320.0088
PRO 3330.0103
GLY 3340.0090
GLY 3350.0051
GLU 3360.0031
VAL 3370.0021
ILE 3380.0018
MET 3390.0018
CYS 3400.0023
ALA 3410.0033
GLY 3420.0033
ALA 3430.0031
VAL 3440.0044
HISD 3450.0040
THR 3460.0031
PRO 3470.0022
PHE 3480.0047
LEU 3490.0049
LEU 3500.0045
LYS 3510.0068
HISE 3520.0091
SER 3530.0074
GLY 3540.0083
VAL 3550.0065
GLY 3560.0074
PRO 3570.0116
SER 3580.0158
ALA 3590.0206
GLU 3600.0173
LEU 3610.0160
LYS 3620.0211
GLU 3630.0233
PHE 3640.0207
GLY 3650.0219
ILE 3660.0170
PRO 3670.0157
VAL 3680.0131
VAL 3690.0097
SER 3700.0095
ASN 3710.0103
LEU 3720.0057
ALA 3730.0046
GLY 3740.0018
VAL 3750.0010
GLY 3760.0022
GLN 3770.0036
ASN 3780.0045
LEU 3790.0054
GLN 3800.0066
ASP 3810.0072
GLN 3820.0075
PRO 3830.0087
ALA 3840.0078
CYS 3850.0071
LEU 3860.0061
THR 3870.0046
ALA 3880.0032
ALA 3890.0029
PRO 3900.0039
VAL 3910.0052
LYS 3920.0099
GLU 3930.0172
LYS 3940.0179
TYR 3950.0139
ASP 3960.0159
GLY 3970.0155
ILE 3980.0091
ALA 3990.0066
ILE 4000.0076
SER 4010.0064
ASP 4020.0085
HISE 4030.0107
ILE 4040.0093
TYR 4050.0083
ASN 4060.0111
GLU 4070.0119
LYS 4080.0131
GLY 4090.0090
GLN 4100.0114
ILE 4110.0112
ARG 4120.0128
LYS 4130.0255
ARG 4140.0268
ALA 4150.0147
ILE 4160.0123
ALA 4170.0177
SER 4180.0175
TYR 4190.0095
LEU 4200.0102
LEU 4210.0181
GLY 4220.0151
GLY 4230.0101
ARG 4240.0104
GLY 4250.0119
GLY 4260.0089
LEU 4270.0074
THR 4280.0091
SER 4290.0088
THR 4300.0080
GLY 4310.0083
CYS 4320.0084
ASP 4330.0088
ARG 4340.0078
GLY 4350.0072
ALA 4360.0071
PHE 4370.0046
VAL 4380.0040
ARG 4390.0038
THR 4400.0065
ALA 4410.0076
GLY 4420.0068
GLN 4430.0031
ALA 4440.0029
LEU 4450.0021
PRO 4460.0042
ASP 4470.0057
LEU 4480.0062
GLN 4490.0063
VAL 4500.0063
ARG 4510.0069
PHE 4520.0069
VAL 4530.0063
PRO 4540.0055
GLY 4550.0046
MET 4560.0027
ALA 4570.0026
LEU 4580.0021
ASP 4590.0034
PRO 4600.0049
ASP 4610.0065
GLY 4620.0066
VAL 4630.0069
SER 4640.0054
THR 4650.0045
TYR 4660.0054
VAL 4670.0036
ARG 4680.0017
PHE 4690.0025
ALA 4700.0019
LYS 4710.0017
PHE 4720.0035
GLN 4730.0053
SER 4740.0052
GLN 4750.0081
GLY 4760.0104
LEU 4770.0097
LYS 4780.0090
TRP 4790.0047
PRO 4800.0045
SER 4810.0050
GLY 4820.0032
ILE 4830.0034
THR 4840.0041
MET 4850.0055
GLN 4860.0066
LEU 4870.0071
ILE 4880.0075
ALA 4890.0072
CYS 4900.0067
ARG 4910.0060
PRO 4920.0080
GLN 4930.0097
SER 4940.0091
THR 4950.0085
GLY 4960.0087
SER 4970.0046
VAL 4980.0037
GLY 4990.0025
LEU 5000.0075
LYS 5010.0092
SER 5020.0141
ALA 5030.0174
ASP 5040.0188
PRO 5050.0170
PHE 5060.0144
ALA 5070.0126
PRO 5080.0083
PRO 5090.0047
LYS 5100.0027
LEU 5110.0054
SER 5120.0094
PRO 5130.0094
GLY 5140.0098
TYR 5150.0113
LEU 5160.0110
THR 5170.0131
ASP 5180.0150
LYS 5190.0145
ASP 5200.0141
GLY 5210.0123
ALA 5220.0106
ASP 5230.0093
LEU 5240.0103
ALA 5250.0103
THR 5260.0089
LEU 5270.0084
ARG 5280.0085
LYS 5290.0087
GLY 5300.0079
ILE 5310.0067
HISE 5320.0080
TRP 5330.0071
ALA 5340.0052
ARG 5350.0055
ASP 5360.0060
VAL 5370.0047
ALA 5380.0034
ARG 5390.0039
SER 5400.0031
SER 5410.0017
ALA 5420.0034
LEU 5430.0027
SER 5440.0022
GLU 5450.0044
TYR 5460.0052
LEU 5470.0037
ASP 5480.0059
GLY 5490.0068
GLU 5500.0056
LEU 5510.0040
PHE 5520.0041
PRO 5530.0057
GLY 5540.0076
SER 5550.0141
GLY 5560.0162
VAL 5570.0130
VAL 5580.0202
SER 5590.0198
ASP 5600.0194
ASP 5610.0155
GLN 5620.0104
ILE 5630.0090
ASP 5640.0102
GLU 5650.0074
TYR 5660.0059
ILE 5670.0072
ARG 5680.0086
ARG 5690.0070
SER 5700.0065
ILE 5710.0083
HISD 5720.0081
SER 5730.0084
SER 5740.0079
ASN 5750.0068
ALA 5760.0060
ILE 5770.0058
THR 5780.0043
GLY 5790.0036
THR 5800.0033
CYS 5810.0028
LYS 5820.0031
MET 5830.0034
GLY 5840.0049
ASN 5850.0059
ALA 5860.0058
GLY 5870.0065
ASP 5880.0045
SER 5890.0037
SER 5900.0025
SER 5910.0020
VAL 5920.0017
VAL 5930.0038
ASP 5940.0045
ASN 5950.0046
GLN 5960.0044
LEU 5970.0032
ARG 5980.0042
VAL 5990.0008
HISE 6000.0023
GLY 6010.0054
VAL 6020.0044
GLU 6030.0038
GLY 6040.0022
LEU 6050.0015
ARG 6060.0017
VAL 6070.0019
VAL 6080.0015
ASP 6090.0015
ALA 6100.0020
SER 6110.0026
VAL 6120.0026
VAL 6130.0026
PRO 6140.0046
LYS 6150.0047
ILE 6160.0040
PRO 6170.0023
GLY 6180.0031
GLY 6190.0043
GLN 6200.0042
THR 6210.0038
GLY 6220.0050
ALA 6230.0034
PRO 6240.0021
VAL 6250.0017
VAL 6260.0037
MET 6270.0043
ILE 6280.0028
ALA 6290.0027
GLU 6300.0046
ARG 6310.0050
ALA 6320.0028
ALA 6330.0023
ALA 6340.0043
LEU 6350.0040
LEU 6360.0030
THR 6370.0029
GLY 6380.0080
LYS 6390.0091
ALA 6400.0103
THR 6410.0118
ILE 6420.0153
GLY 6430.0271
ALA 6440.0704
SER 6450.0529
ALA 6460.0372
ALA 6470.0446
ALA 6480.0321
PRO 6490.0275

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.