CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 19  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0736
SER 770.0139
PRO 780.0134
VAL 790.0143
ALA 800.0180
GLY 810.0233
GLN 820.0223
LYS 830.0205
TYR 840.0178
ASP 850.0193
TYR 860.0124
ILE 870.0099
LEU 880.0091
VAL 890.0068
GLY 900.0075
GLY 910.0095
GLY 920.0086
THR 930.0088
ALA 940.0080
ALA 950.0093
CYS 960.0110
VAL 970.0103
LEU 980.0108
ALA 990.0131
ASN 1000.0157
ARG 1010.0149
LEU 1020.0146
SER 1030.0180
ALA 1040.0269
ASP 1050.0285
GLY 1060.0315
SER 1070.0303
LYS 1080.0250
ARG 1090.0217
VAL 1100.0160
LEU 1110.0127
VAL 1120.0111
LEU 1130.0077
GLU 1140.0076
ALA 1150.0062
GLY 1160.0077
PRO 1170.0083
ASP 1180.0092
ASN 1190.0098
THR 1200.0095
SER 1210.0095
ARG 1220.0071
ASP 1230.0073
VAL 1240.0074
LYS 1250.0065
ILE 1260.0054
PRO 1270.0050
ALA 1280.0053
ALA 1290.0057
ILE 1300.0059
THR 1310.0067
ARG 1320.0064
LEU 1330.0069
PHE 1340.0063
ARG 1350.0066
SER 1360.0080
PRO 1370.0077
LEU 1380.0076
ASP 1390.0071
TRP 1400.0055
ASN 1410.0059
LEU 1420.0051
PHE 1430.0043
SER 1440.0028
GLU 1450.0025
LEU 1460.0063
GLN 1470.0059
GLU 1480.0088
GLN 1490.0075
LEU 1500.0068
ALA 1510.0080
GLU 1520.0089
ARG 1530.0071
GLN 1540.0061
ILE 1550.0036
TYR 1560.0041
MET 1570.0035
ALA 1580.0050
ARG 1590.0049
GLY 1600.0056
ARG 1610.0085
LEU 1620.0086
LEU 1630.0091
GLY 1640.0082
GLY 1650.0078
SER 1660.0081
SER 1670.0081
ALA 1680.0072
THR 1690.0074
ASN 1700.0045
ALA 1710.0036
THR 1720.0033
LEU 1730.0031
TYR 1740.0028
HISD 1750.0028
ARG 1760.0051
GLY 1770.0060
ALA 1780.0070
ALA 1790.0080
GLY 1800.0075
ASP 1810.0072
TYR 1820.0072
ASP 1830.0080
ALA 1840.0079
TRP 1850.0074
GLY 1860.0075
VAL 1870.0066
GLU 1880.0101
GLY 1890.0093
TRP 1900.0091
SER 1910.0083
SER 1920.0085
GLU 1930.0086
ASP 1940.0070
VAL 1950.0060
LEU 1960.0067
SER 1970.0040
TRP 1980.0034
PHE 1990.0037
VAL 2000.0027
GLN 2010.0009
ALA 2020.0024
GLU 2030.0008
THR 2040.0005
ASN 2050.0015
ALA 2060.0019
ASP 2070.0031
PHE 2080.0045
GLY 2090.0042
PRO 2100.0052
GLY 2110.0070
ALA 2120.0071
TYR 2130.0066
HISH 2140.0053
GLY 2150.0025
SER 2160.0031
GLY 2170.0020
GLY 2180.0038
PRO 2190.0055
MET 2200.0051
ARG 2210.0015
VAL 2220.0010
GLU 2230.0010
ASN 2240.0027
PRO 2250.0030
ARG 2260.0031
TYR 2270.0065
THR 2280.0066
ASN 2290.0064
LYS 2300.0096
GLN 2310.0096
LEU 2320.0092
HISE 2330.0092
THR 2340.0101
ALA 2350.0095
PHE 2360.0093
PHE 2370.0096
LYS 2380.0097
ALA 2390.0100
ALA 2400.0097
GLU 2410.0095
GLU 2420.0100
VAL 2430.0097
GLY 2440.0093
LEU 2450.0082
THR 2460.0081
PRO 2470.0083
ASN 2480.0072
SER 2490.0072
ASP 2500.0074
PHE 2510.0066
ASN 2520.0067
ASP 2530.0063
TRP 2540.0071
SER 2550.0069
HISE 2560.0069
ASP 2570.0070
HISE 2580.0071
ALA 2590.0071
GLY 2600.0080
TYR 2610.0082
GLY 2620.0085
THR 2630.0041
PHE 2640.0044
GLN 2650.0042
VAL 2660.0010
MET 2670.0015
GLN 2680.0021
ASP 2690.0032
LYS 2700.0036
GLY 2710.0038
THR 2720.0058
ARG 2730.0062
ALA 2740.0064
ASP 2750.0101
MET 2760.0096
TYR 2770.0111
ARG 2780.0107
GLN 2790.0099
TYR 2800.0113
LEU 2810.0153
LYS 2820.0169
PRO 2830.0192
VAL 2840.0222
LEU 2850.0201
GLY 2860.0221
ARG 2870.0268
ARG 2880.0276
ASN 2890.0231
LEU 2900.0180
GLN 2910.0147
VAL 2920.0128
LEU 2930.0087
THR 2940.0087
GLY 2950.0067
ALA 2960.0042
ALA 2970.0037
VAL 2980.0033
THR 2990.0027
LYS 3000.0042
VAL 3010.0060
ASN 3020.0069
ILE 3030.0071
ASP 3040.0086
GLN 3050.0163
ALA 3060.0206
ALA 3070.0274
GLY 3080.0247
LYS 3090.0173
ALA 3100.0136
GLN 3110.0102
ALA 3120.0072
LEU 3130.0086
GLY 3140.0101
VAL 3150.0075
GLU 3160.0061
PHE 3170.0044
SER 3180.0043
THR 3190.0034
ASP 3200.0118
GLY 3210.0155
PRO 3220.0178
THR 3230.0271
GLY 3240.0208
GLU 3250.0189
ARG 3260.0096
LEU 3270.0092
SER 3280.0116
ALA 3290.0114
GLU 3300.0137
LEU 3310.0144
ALA 3320.0225
PRO 3330.0290
GLY 3340.0250
GLY 3350.0124
GLU 3360.0093
VAL 3370.0077
ILE 3380.0065
MET 3390.0060
CYS 3400.0069
ALA 3410.0047
GLY 3420.0046
ALA 3430.0044
VAL 3440.0039
HISD 3450.0036
THR 3460.0042
PRO 3470.0049
PHE 3480.0045
LEU 3490.0043
LEU 3500.0061
LYS 3510.0070
HISE 3520.0061
SER 3530.0072
GLY 3540.0098
VAL 3550.0096
GLY 3560.0109
PRO 3570.0137
SER 3580.0162
ALA 3590.0202
GLU 3600.0177
LEU 3610.0160
LYS 3620.0199
GLU 3630.0205
PHE 3640.0169
GLY 3650.0182
ILE 3660.0154
PRO 3670.0161
VAL 3680.0150
VAL 3690.0135
SER 3700.0120
ASN 3710.0122
LEU 3720.0102
ALA 3730.0104
GLY 3740.0066
VAL 3750.0061
GLY 3760.0058
GLN 3770.0041
ASN 3780.0028
LEU 3790.0022
GLN 3800.0032
ASP 3810.0032
GLN 3820.0030
PRO 3830.0054
ALA 3840.0061
CYS 3850.0063
LEU 3860.0086
THR 3870.0087
ALA 3880.0088
ALA 3890.0093
PRO 3900.0087
VAL 3910.0086
LYS 3920.0091
GLU 3930.0091
LYS 3940.0089
TYR 3950.0080
ASP 3960.0078
GLY 3970.0080
ILE 3980.0071
ALA 3990.0066
ILE 4000.0070
SER 4010.0060
ASP 4020.0046
HISE 4030.0052
ILE 4040.0048
TYR 4050.0052
ASN 4060.0044
GLU 4070.0048
LYS 4080.0070
GLY 4090.0072
GLN 4100.0075
ILE 4110.0069
ARG 4120.0050
LYS 4130.0132
ARG 4140.0095
ALA 4150.0019
ILE 4160.0087
ALA 4170.0085
SER 4180.0029
TYR 4190.0038
LEU 4200.0062
LEU 4210.0042
GLY 4220.0017
GLY 4230.0034
ARG 4240.0026
GLY 4250.0029
GLY 4260.0041
LEU 4270.0058
THR 4280.0043
SER 4290.0042
THR 4300.0040
GLY 4310.0053
CYS 4320.0052
ASP 4330.0048
ARG 4340.0066
GLY 4350.0070
ALA 4360.0077
PHE 4370.0069
VAL 4380.0067
ARG 4390.0065
THR 4400.0060
ALA 4410.0058
GLY 4420.0056
GLN 4430.0058
ALA 4440.0060
LEU 4450.0064
PRO 4460.0061
ASP 4470.0061
LEU 4480.0067
GLN 4490.0063
VAL 4500.0063
ARG 4510.0064
PHE 4520.0083
VAL 4530.0079
PRO 4540.0078
GLY 4550.0086
MET 4560.0080
ALA 4570.0079
LEU 4580.0057
ASP 4590.0065
PRO 4600.0078
ASP 4610.0051
GLY 4620.0053
VAL 4630.0053
SER 4640.0065
THR 4650.0064
TYR 4660.0060
VAL 4670.0070
ARG 4680.0070
PHE 4690.0071
ALA 4700.0078
LYS 4710.0082
PHE 4720.0073
GLN 4730.0079
SER 4740.0091
GLN 4750.0095
GLY 4760.0083
LEU 4770.0073
LYS 4780.0056
TRP 4790.0053
PRO 4800.0050
SER 4810.0065
GLY 4820.0086
ILE 4830.0090
THR 4840.0090
MET 4850.0081
GLN 4860.0079
LEU 4870.0076
ILE 4880.0053
ALA 4890.0051
CYS 4900.0050
ARG 4910.0053
PRO 4920.0050
GLN 4930.0051
SER 4940.0041
THR 4950.0030
GLY 4960.0022
SER 4970.0026
VAL 4980.0035
GLY 4990.0043
LEU 5000.0075
LYS 5010.0079
SER 5020.0067
ALA 5030.0084
ASP 5040.0026
PRO 5050.0027
PHE 5060.0024
ALA 5070.0023
PRO 5080.0045
PRO 5090.0040
LYS 5100.0036
LEU 5110.0026
SER 5120.0013
PRO 5130.0016
GLY 5140.0030
TYR 5150.0050
LEU 5160.0055
THR 5170.0062
ASP 5180.0076
LYS 5190.0077
ASP 5200.0073
GLY 5210.0062
ALA 5220.0056
ASP 5230.0054
LEU 5240.0060
ALA 5250.0053
THR 5260.0056
LEU 5270.0063
ARG 5280.0062
LYS 5290.0059
GLY 5300.0071
ILE 5310.0080
HISE 5320.0075
TRP 5330.0081
ALA 5340.0089
ARG 5350.0092
ASP 5360.0095
VAL 5370.0097
ALA 5380.0101
ARG 5390.0105
SER 5400.0107
SER 5410.0109
ALA 5420.0105
LEU 5430.0104
SER 5440.0103
GLU 5450.0102
TYR 5460.0098
LEU 5470.0097
ASP 5480.0097
GLY 5490.0096
GLU 5500.0096
LEU 5510.0091
PHE 5520.0093
PRO 5530.0094
GLY 5540.0111
SER 5550.0200
GLY 5560.0254
VAL 5570.0177
VAL 5580.0214
SER 5590.0189
ASP 5600.0110
ASP 5610.0114
GLN 5620.0144
ILE 5630.0088
ASP 5640.0082
GLU 5650.0109
TYR 5660.0088
ILE 5670.0079
ARG 5680.0083
ARG 5690.0073
SER 5700.0074
ILE 5710.0067
HISD 5720.0045
SER 5730.0043
SER 5740.0040
ASN 5750.0013
ALA 5760.0008
ILE 5770.0010
THR 5780.0031
GLY 5790.0029
THR 5800.0031
CYS 5810.0045
LYS 5820.0039
MET 5830.0040
GLY 5840.0044
ASN 5850.0058
ALA 5860.0080
GLY 5870.0098
ASP 5880.0078
SER 5890.0090
SER 5900.0063
SER 5910.0053
VAL 5920.0058
VAL 5930.0045
ASP 5940.0047
ASN 5950.0059
GLN 5960.0047
LEU 5970.0039
ARG 5980.0045
VAL 5990.0067
HISE 6000.0086
GLY 6010.0113
VAL 6020.0094
GLU 6030.0093
GLY 6040.0078
LEU 6050.0050
ARG 6060.0048
VAL 6070.0053
VAL 6080.0046
ASP 6090.0052
ALA 6100.0054
SER 6110.0043
VAL 6120.0036
VAL 6130.0043
PRO 6140.0049
LYS 6150.0047
ILE 6160.0046
PRO 6170.0051
GLY 6180.0047
GLY 6190.0052
GLN 6200.0020
THR 6210.0024
GLY 6220.0026
ALA 6230.0041
PRO 6240.0039
VAL 6250.0042
VAL 6260.0057
MET 6270.0038
ILE 6280.0033
ALA 6290.0059
GLU 6300.0053
ARG 6310.0021
ALA 6320.0041
ALA 6330.0070
ALA 6340.0056
LEU 6350.0041
LEU 6360.0073
THR 6370.0112
GLY 6380.0070
LYS 6390.0065
ALA 6400.0051
THR 6410.0135
ILE 6420.0165
GLY 6430.0244
ALA 6440.0475
SER 6450.0430
ALA 6460.0382
ALA 6470.0528
ALA 6480.0579
PRO 6490.0736

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.