CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 22  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0609
SER 770.0138
PRO 780.0111
VAL 790.0099
ALA 800.0157
GLY 810.0180
GLN 820.0146
LYS 830.0112
TYR 840.0077
ASP 850.0062
TYR 860.0044
ILE 870.0044
LEU 880.0046
VAL 890.0047
GLY 900.0053
GLY 910.0056
GLY 920.0041
THR 930.0042
ALA 940.0039
ALA 950.0034
CYS 960.0038
VAL 970.0039
LEU 980.0040
ALA 990.0041
ASN 1000.0067
ARG 1010.0062
LEU 1020.0057
SER 1030.0069
ALA 1040.0120
ASP 1050.0133
GLY 1060.0153
SER 1070.0128
LYS 1080.0103
ARG 1090.0098
VAL 1100.0066
LEU 1110.0059
VAL 1120.0051
LEU 1130.0046
GLU 1140.0048
ALA 1150.0050
GLY 1160.0048
PRO 1170.0046
ASP 1180.0043
ASN 1190.0031
THR 1200.0027
SER 1210.0020
ARG 1220.0020
ASP 1230.0017
VAL 1240.0022
LYS 1250.0049
ILE 1260.0054
PRO 1270.0069
ALA 1280.0050
ALA 1290.0044
ILE 1300.0044
THR 1310.0039
ARG 1320.0039
LEU 1330.0026
PHE 1340.0043
ARG 1350.0048
SER 1360.0044
PRO 1370.0047
LEU 1380.0039
ASP 1390.0045
TRP 1400.0058
ASN 1410.0057
LEU 1420.0054
PHE 1430.0053
SER 1440.0048
GLU 1450.0045
LEU 1460.0019
GLN 1470.0021
GLU 1480.0040
GLN 1490.0042
LEU 1500.0027
ALA 1510.0043
GLU 1520.0036
ARG 1530.0023
GLN 1540.0030
ILE 1550.0034
TYR 1560.0043
MET 1570.0047
ALA 1580.0051
ARG 1590.0049
GLY 1600.0050
ARG 1610.0041
LEU 1620.0039
LEU 1630.0039
GLY 1640.0029
GLY 1650.0036
SER 1660.0031
SER 1670.0030
ALA 1680.0024
THR 1690.0020
ASN 1700.0033
ALA 1710.0042
THR 1720.0048
LEU 1730.0043
TYR 1740.0042
HISD 1750.0036
ARG 1760.0035
GLY 1770.0040
ALA 1780.0049
ALA 1790.0061
GLY 1800.0069
ASP 1810.0069
TYR 1820.0056
ASP 1830.0073
ALA 1840.0080
TRP 1850.0076
GLY 1860.0081
VAL 1870.0075
GLU 1880.0040
GLY 1890.0037
TRP 1900.0037
SER 1910.0066
SER 1920.0055
GLU 1930.0071
ASP 1940.0062
VAL 1950.0046
LEU 1960.0058
SER 1970.0075
TRP 1980.0058
PHE 1990.0054
VAL 2000.0084
GLN 2010.0087
ALA 2020.0075
GLU 2030.0088
THR 2040.0115
ASN 2050.0130
ALA 2060.0167
ASP 2070.0163
PHE 2080.0169
GLY 2090.0207
PRO 2100.0204
GLY 2110.0207
ALA 2120.0173
TYR 2130.0129
HISH 2140.0137
GLY 2150.0120
SER 2160.0136
GLY 2170.0131
GLY 2180.0085
PRO 2190.0078
MET 2200.0073
ARG 2210.0089
VAL 2220.0083
GLU 2230.0085
ASN 2240.0076
PRO 2250.0083
ARG 2260.0094
TYR 2270.0103
THR 2280.0097
ASN 2290.0092
LYS 2300.0101
GLN 2310.0097
LEU 2320.0070
HISE 2330.0059
THR 2340.0064
ALA 2350.0063
PHE 2360.0038
PHE 2370.0041
LYS 2380.0066
ALA 2390.0057
ALA 2400.0049
GLU 2410.0071
GLU 2420.0086
VAL 2430.0079
GLY 2440.0082
LEU 2450.0073
THR 2460.0062
PRO 2470.0042
ASN 2480.0027
SER 2490.0031
ASP 2500.0039
PHE 2510.0030
ASN 2520.0046
ASP 2530.0054
TRP 2540.0060
SER 2550.0079
HISE 2560.0057
ASP 2570.0063
HISE 2580.0053
ALA 2590.0058
GLY 2600.0041
TYR 2610.0028
GLY 2620.0016
THR 2630.0039
PHE 2640.0040
GLN 2650.0055
VAL 2660.0065
MET 2670.0068
GLN 2680.0074
ASP 2690.0089
LYS 2700.0092
GLY 2710.0094
THR 2720.0062
ARG 2730.0055
ALA 2740.0057
ASP 2750.0045
MET 2760.0046
TYR 2770.0038
ARG 2780.0055
GLN 2790.0061
TYR 2800.0061
LEU 2810.0059
LYS 2820.0054
PRO 2830.0077
VAL 2840.0103
LEU 2850.0083
GLY 2860.0105
ARG 2870.0141
ARG 2880.0163
ASN 2890.0130
LEU 2900.0085
GLN 2910.0078
VAL 2920.0066
LEU 2930.0056
THR 2940.0052
GLY 2950.0053
ALA 2960.0048
ALA 2970.0048
VAL 2980.0048
THR 2990.0035
LYS 3000.0044
VAL 3010.0055
ASN 3020.0073
ILE 3030.0149
ASP 3040.0241
GLN 3050.0372
ALA 3060.0453
ALA 3070.0559
GLY 3080.0413
LYS 3090.0348
ALA 3100.0300
GLN 3110.0252
ALA 3120.0143
LEU 3130.0110
GLY 3140.0046
VAL 3150.0040
GLU 3160.0035
PHE 3170.0055
SER 3180.0051
THR 3190.0043
ASP 3200.0066
GLY 3210.0108
PRO 3220.0148
THR 3230.0204
GLY 3240.0130
GLU 3250.0123
ARG 3260.0071
LEU 3270.0065
SER 3280.0075
ALA 3290.0075
GLU 3300.0081
LEU 3310.0059
ALA 3320.0089
PRO 3330.0113
GLY 3340.0059
GLY 3350.0049
GLU 3360.0063
VAL 3370.0065
ILE 3380.0060
MET 3390.0068
CYS 3400.0071
ALA 3410.0070
GLY 3420.0075
ALA 3430.0079
VAL 3440.0073
HISD 3450.0068
THR 3460.0075
PRO 3470.0077
PHE 3480.0065
LEU 3490.0068
LEU 3500.0081
LYS 3510.0067
HISE 3520.0081
SER 3530.0099
GLY 3540.0106
VAL 3550.0090
GLY 3560.0067
PRO 3570.0082
SER 3580.0119
ALA 3590.0214
GLU 3600.0201
LEU 3610.0183
LYS 3620.0285
GLU 3630.0337
PHE 3640.0287
GLY 3650.0328
ILE 3660.0251
PRO 3670.0262
VAL 3680.0169
VAL 3690.0185
SER 3700.0142
ASN 3710.0092
LEU 3720.0100
ALA 3730.0120
GLY 3740.0111
VAL 3750.0095
GLY 3760.0102
GLN 3770.0093
ASN 3780.0092
LEU 3790.0090
GLN 3800.0063
ASP 3810.0063
GLN 3820.0056
PRO 3830.0022
ALA 3840.0032
CYS 3850.0034
LEU 3860.0047
THR 3870.0045
ALA 3880.0045
ALA 3890.0017
PRO 3900.0003
VAL 3910.0027
LYS 3920.0075
GLU 3930.0135
LYS 3940.0125
TYR 3950.0102
ASP 3960.0115
GLY 3970.0119
ILE 3980.0078
ALA 3990.0069
ILE 4000.0084
SER 4010.0081
ASP 4020.0080
HISE 4030.0102
ILE 4040.0086
TYR 4050.0075
ASN 4060.0082
GLU 4070.0092
LYS 4080.0096
GLY 4090.0079
GLN 4100.0073
ILE 4110.0067
ARG 4120.0075
LYS 4130.0142
ARG 4140.0189
ALA 4150.0140
ILE 4160.0055
ALA 4170.0071
SER 4180.0122
TYR 4190.0090
LEU 4200.0096
LEU 4210.0107
GLY 4220.0136
GLY 4230.0127
ARG 4240.0120
GLY 4250.0107
GLY 4260.0097
LEU 4270.0091
THR 4280.0092
SER 4290.0082
THR 4300.0069
GLY 4310.0055
CYS 4320.0048
ASP 4330.0049
ARG 4340.0034
GLY 4350.0009
ALA 4360.0019
PHE 4370.0046
VAL 4380.0069
ARG 4390.0096
THR 4400.0089
ALA 4410.0100
GLY 4420.0132
GLN 4430.0224
ALA 4440.0156
LEU 4450.0088
PRO 4460.0072
ASP 4470.0068
LEU 4480.0051
GLN 4490.0031
VAL 4500.0023
ARG 4510.0013
PHE 4520.0025
VAL 4530.0039
PRO 4540.0044
GLY 4550.0052
MET 4560.0042
ALA 4570.0056
LEU 4580.0060
ASP 4590.0058
PRO 4600.0054
ASP 4610.0038
GLY 4620.0039
VAL 4630.0044
SER 4640.0050
THR 4650.0045
TYR 4660.0048
VAL 4670.0073
ARG 4680.0069
PHE 4690.0063
ALA 4700.0081
LYS 4710.0095
PHE 4720.0088
GLN 4730.0092
SER 4740.0126
GLN 4750.0136
GLY 4760.0106
LEU 4770.0096
LYS 4780.0078
TRP 4790.0051
PRO 4800.0042
SER 4810.0039
GLY 4820.0019
ILE 4830.0023
THR 4840.0032
MET 4850.0028
GLN 4860.0031
LEU 4870.0034
ILE 4880.0036
ALA 4890.0040
CYS 4900.0048
ARG 4910.0049
PRO 4920.0036
GLN 4930.0032
SER 4940.0043
THR 4950.0055
GLY 4960.0065
SER 4970.0077
VAL 4980.0073
GLY 4990.0063
LEU 5000.0062
LYS 5010.0071
SER 5020.0081
ALA 5030.0110
ASP 5040.0075
PRO 5050.0097
PHE 5060.0066
ALA 5070.0055
PRO 5080.0046
PRO 5090.0061
LYS 5100.0058
LEU 5110.0059
SER 5120.0055
PRO 5130.0056
GLY 5140.0045
TYR 5150.0022
LEU 5160.0025
THR 5170.0044
ASP 5180.0080
LYS 5190.0080
ASP 5200.0080
GLY 5210.0050
ALA 5220.0034
ASP 5230.0021
LEU 5240.0027
ALA 5250.0020
THR 5260.0032
LEU 5270.0027
ARG 5280.0035
LYS 5290.0043
GLY 5300.0049
ILE 5310.0050
HISE 5320.0059
TRP 5330.0048
ALA 5340.0048
ARG 5350.0049
ASP 5360.0046
VAL 5370.0036
ALA 5380.0031
ARG 5390.0042
SER 5400.0055
SER 5410.0074
ALA 5420.0067
LEU 5430.0046
SER 5440.0054
GLU 5450.0076
TYR 5460.0061
LEU 5470.0042
ASP 5480.0022
GLY 5490.0026
GLU 5500.0037
LEU 5510.0064
PHE 5520.0062
PRO 5530.0063
GLY 5540.0103
SER 5550.0140
GLY 5560.0153
VAL 5570.0182
VAL 5580.0308
SER 5590.0300
ASP 5600.0202
ASP 5610.0189
GLN 5620.0166
ILE 5630.0089
ASP 5640.0068
GLU 5650.0090
TYR 5660.0056
ILE 5670.0036
ARG 5680.0036
ARG 5690.0033
SER 5700.0032
ILE 5710.0014
HISD 5720.0025
SER 5730.0034
SER 5740.0043
ASN 5750.0062
ALA 5760.0063
ILE 5770.0064
THR 5780.0083
GLY 5790.0083
THR 5800.0090
CYS 5810.0103
LYS 5820.0110
MET 5830.0102
GLY 5840.0128
ASN 5850.0138
ALA 5860.0186
GLY 5870.0289
ASP 5880.0250
SER 5890.0216
SER 5900.0183
SER 5910.0160
VAL 5920.0130
VAL 5930.0121
ASP 5940.0103
ASN 5950.0083
GLN 5960.0086
LEU 5970.0096
ARG 5980.0100
VAL 5990.0152
HISE 6000.0167
GLY 6010.0174
VAL 6020.0207
GLU 6030.0222
GLY 6040.0158
LEU 6050.0092
ARG 6060.0095
VAL 6070.0097
VAL 6080.0064
ASP 6090.0071
ALA 6100.0078
SER 6110.0092
VAL 6120.0086
VAL 6130.0083
PRO 6140.0073
LYS 6150.0074
ILE 6160.0073
PRO 6170.0050
GLY 6180.0051
GLY 6190.0052
GLN 6200.0026
THR 6210.0026
GLY 6220.0029
ALA 6230.0036
PRO 6240.0016
VAL 6250.0032
VAL 6260.0029
MET 6270.0018
ILE 6280.0016
ALA 6290.0021
GLU 6300.0023
ARG 6310.0008
ALA 6320.0034
ALA 6330.0023
ALA 6340.0024
LEU 6350.0022
LEU 6360.0025
THR 6370.0038
GLY 6380.0061
LYS 6390.0060
ALA 6400.0047
THR 6410.0051
ILE 6420.0069
GLY 6430.0161
ALA 6440.0359
SER 6450.0356
ALA 6460.0288
ALA 6470.0423
ALA 6480.0377
PRO 6490.0609

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.