CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0366
SER 770.0175
PRO 780.0137
VAL 790.0107
ALA 800.0133
GLY 810.0104
GLN 820.0078
LYS 830.0031
TYR 840.0022
ASP 850.0023
TYR 860.0012
ILE 870.0037
LEU 880.0052
VAL 890.0063
GLY 900.0070
GLY 910.0065
GLY 920.0079
THR 930.0072
ALA 940.0068
ALA 950.0064
CYS 960.0057
VAL 970.0042
LEU 980.0025
ALA 990.0037
ASN 1000.0035
ARG 1010.0028
LEU 1020.0033
SER 1030.0071
ALA 1040.0123
ASP 1050.0158
GLY 1060.0193
SER 1070.0151
LYS 1080.0098
ARG 1090.0069
VAL 1100.0039
LEU 1110.0055
VAL 1120.0072
LEU 1130.0068
GLU 1140.0073
ALA 1150.0083
GLY 1160.0082
PRO 1170.0085
ASP 1180.0082
ASN 1190.0081
THR 1200.0088
SER 1210.0076
ARG 1220.0075
ASP 1230.0058
VAL 1240.0045
LYS 1250.0062
ILE 1260.0061
PRO 1270.0044
ALA 1280.0027
ALA 1290.0029
ILE 1300.0019
THR 1310.0022
ARG 1320.0021
LEU 1330.0010
PHE 1340.0044
ARG 1350.0042
SER 1360.0048
PRO 1370.0053
LEU 1380.0042
ASP 1390.0044
TRP 1400.0067
ASN 1410.0066
LEU 1420.0075
PHE 1430.0108
SER 1440.0093
GLU 1450.0100
LEU 1460.0254
GLN 1470.0200
GLU 1480.0305
GLN 1490.0219
LEU 1500.0172
ALA 1510.0240
GLU 1520.0316
ARG 1530.0255
GLN 1540.0203
ILE 1550.0092
TYR 1560.0097
MET 1570.0085
ALA 1580.0076
ARG 1590.0067
GLY 1600.0063
ARG 1610.0062
LEU 1620.0063
LEU 1630.0064
GLY 1640.0055
GLY 1650.0064
SER 1660.0059
SER 1670.0050
ALA 1680.0050
THR 1690.0034
ASN 1700.0045
ALA 1710.0031
THR 1720.0031
LEU 1730.0038
TYR 1740.0039
HISD 1750.0050
ARG 1760.0075
GLY 1770.0081
ALA 1780.0083
ALA 1790.0087
GLY 1800.0097
ASP 1810.0103
TYR 1820.0097
ASP 1830.0103
ALA 1840.0115
TRP 1850.0118
GLY 1860.0117
VAL 1870.0099
GLU 1880.0091
GLY 1890.0082
TRP 1900.0085
SER 1910.0097
SER 1920.0084
GLU 1930.0086
ASP 1940.0098
VAL 1950.0082
LEU 1960.0078
SER 1970.0088
TRP 1980.0083
PHE 1990.0076
VAL 2000.0096
GLN 2010.0099
ALA 2020.0074
GLU 2030.0073
THR 2040.0081
ASN 2050.0107
ALA 2060.0134
ASP 2070.0167
PHE 2080.0193
GLY 2090.0204
PRO 2100.0209
GLY 2110.0240
ALA 2120.0210
TYR 2130.0153
HISH 2140.0139
GLY 2150.0122
SER 2160.0141
GLY 2170.0108
GLY 2180.0054
PRO 2190.0037
MET 2200.0035
ARG 2210.0029
VAL 2220.0033
GLU 2230.0052
ASN 2240.0046
PRO 2250.0058
ARG 2260.0085
TYR 2270.0071
THR 2280.0079
ASN 2290.0073
LYS 2300.0112
GLN 2310.0104
LEU 2320.0066
HISE 2330.0065
THR 2340.0088
ALA 2350.0078
PHE 2360.0050
PHE 2370.0068
LYS 2380.0091
ALA 2390.0071
ALA 2400.0067
GLU 2410.0096
GLU 2420.0099
VAL 2430.0091
GLY 2440.0104
LEU 2450.0061
THR 2460.0063
PRO 2470.0045
ASN 2480.0051
SER 2490.0059
ASP 2500.0052
PHE 2510.0051
ASN 2520.0060
ASP 2530.0074
TRP 2540.0085
SER 2550.0100
HISE 2560.0086
ASP 2570.0076
HISE 2580.0062
ALA 2590.0050
GLY 2600.0047
TYR 2610.0031
GLY 2620.0012
THR 2630.0025
PHE 2640.0013
GLN 2650.0015
VAL 2660.0023
MET 2670.0029
GLN 2680.0043
ASP 2690.0054
LYS 2700.0090
GLY 2710.0085
THR 2720.0057
ARG 2730.0044
ALA 2740.0040
ASP 2750.0054
MET 2760.0052
TYR 2770.0066
ARG 2780.0061
GLN 2790.0038
TYR 2800.0046
LEU 2810.0054
LYS 2820.0082
PRO 2830.0084
VAL 2840.0112
LEU 2850.0132
GLY 2860.0172
ARG 2870.0221
ARG 2880.0254
ASN 2890.0147
LEU 2900.0090
GLN 2910.0099
VAL 2920.0110
LEU 2930.0094
THR 2940.0098
GLY 2950.0106
ALA 2960.0064
ALA 2970.0059
VAL 2980.0064
THR 2990.0062
LYS 3000.0048
VAL 3010.0037
ASN 3020.0017
ILE 3030.0020
ASP 3040.0025
GLN 3050.0094
ALA 3060.0105
ALA 3070.0184
GLY 3080.0129
LYS 3090.0089
ALA 3100.0061
GLN 3110.0036
ALA 3120.0035
LEU 3130.0036
GLY 3140.0037
VAL 3150.0050
GLU 3160.0066
PHE 3170.0075
SER 3180.0093
THR 3190.0101
ASP 3200.0147
GLY 3210.0056
PRO 3220.0080
THR 3230.0182
GLY 3240.0194
GLU 3250.0251
ARG 3260.0128
LEU 3270.0112
SER 3280.0095
ALA 3290.0068
GLU 3300.0052
LEU 3310.0029
ALA 3320.0026
PRO 3330.0075
GLY 3340.0084
GLY 3350.0031
GLU 3360.0038
VAL 3370.0046
ILE 3380.0054
MET 3390.0068
CYS 3400.0078
ALA 3410.0092
GLY 3420.0100
ALA 3430.0098
VAL 3440.0087
HISD 3450.0084
THR 3460.0079
PRO 3470.0054
PHE 3480.0052
LEU 3490.0049
LEU 3500.0021
LYS 3510.0022
HISE 3520.0067
SER 3530.0059
GLY 3540.0059
VAL 3550.0035
GLY 3560.0079
PRO 3570.0181
SER 3580.0249
ALA 3590.0358
GLU 3600.0258
LEU 3610.0226
LYS 3620.0355
GLU 3630.0366
PHE 3640.0288
GLY 3650.0359
ILE 3660.0257
PRO 3670.0263
VAL 3680.0176
VAL 3690.0111
SER 3700.0125
ASN 3710.0148
LEU 3720.0103
ALA 3730.0105
GLY 3740.0083
VAL 3750.0059
GLY 3760.0061
GLN 3770.0054
ASN 3780.0070
LEU 3790.0072
GLN 3800.0071
ASP 3810.0072
GLN 3820.0064
PRO 3830.0028
ALA 3840.0047
CYS 3850.0043
LEU 3860.0046
THR 3870.0043
ALA 3880.0042
ALA 3890.0036
PRO 3900.0033
VAL 3910.0025
LYS 3920.0067
GLU 3930.0143
LYS 3940.0152
TYR 3950.0083
ASP 3960.0079
GLY 3970.0054
ILE 3980.0041
ALA 3990.0030
ILE 4000.0028
SER 4010.0019
ASP 4020.0017
HISE 4030.0015
ILE 4040.0005
TYR 4050.0027
ASN 4060.0057
GLU 4070.0068
LYS 4080.0087
GLY 4090.0059
GLN 4100.0090
ILE 4110.0070
ARG 4120.0064
LYS 4130.0214
ARG 4140.0175
ALA 4150.0064
ILE 4160.0073
ALA 4170.0038
SER 4180.0115
TYR 4190.0115
LEU 4200.0187
LEU 4210.0234
GLY 4220.0203
GLY 4230.0163
ARG 4240.0121
GLY 4250.0075
GLY 4260.0054
LEU 4270.0068
THR 4280.0064
SER 4290.0043
THR 4300.0025
GLY 4310.0028
CYS 4320.0015
ASP 4330.0013
ARG 4340.0011
GLY 4350.0009
ALA 4360.0028
PHE 4370.0040
VAL 4380.0039
ARG 4390.0048
THR 4400.0057
ALA 4410.0047
GLY 4420.0047
GLN 4430.0113
ALA 4440.0093
LEU 4450.0064
PRO 4460.0055
ASP 4470.0046
LEU 4480.0042
GLN 4490.0043
VAL 4500.0036
ARG 4510.0036
PHE 4520.0019
VAL 4530.0017
PRO 4540.0024
GLY 4550.0018
MET 4560.0020
ALA 4570.0024
LEU 4580.0038
ASP 4590.0049
PRO 4600.0060
ASP 4610.0074
GLY 4620.0076
VAL 4630.0081
SER 4640.0044
THR 4650.0042
TYR 4660.0042
VAL 4670.0043
ARG 4680.0038
PHE 4690.0037
ALA 4700.0049
LYS 4710.0049
PHE 4720.0038
GLN 4730.0052
SER 4740.0072
GLN 4750.0064
GLY 4760.0060
LEU 4770.0028
LYS 4780.0011
TRP 4790.0008
PRO 4800.0022
SER 4810.0021
GLY 4820.0021
ILE 4830.0020
THR 4840.0029
MET 4850.0041
GLN 4860.0046
LEU 4870.0042
ILE 4880.0052
ALA 4890.0048
CYS 4900.0062
ARG 4910.0065
PRO 4920.0038
GLN 4930.0043
SER 4940.0053
THR 4950.0036
GLY 4960.0028
SER 4970.0030
VAL 4980.0037
GLY 4990.0023
LEU 5000.0065
LYS 5010.0097
SER 5020.0125
ALA 5030.0147
ASP 5040.0148
PRO 5050.0112
PHE 5060.0091
ALA 5070.0117
PRO 5080.0118
PRO 5090.0069
LYS 5100.0059
LEU 5110.0056
SER 5120.0045
PRO 5130.0018
GLY 5140.0041
TYR 5150.0077
LEU 5160.0104
THR 5170.0153
ASP 5180.0212
LYS 5190.0278
ASP 5200.0328
GLY 5210.0204
ALA 5220.0170
ASP 5230.0091
LEU 5240.0090
ALA 5250.0111
THR 5260.0091
LEU 5270.0050
ARG 5280.0067
LYS 5290.0082
GLY 5300.0049
ILE 5310.0046
HISE 5320.0061
TRP 5330.0046
ALA 5340.0042
ARG 5350.0043
ASP 5360.0041
VAL 5370.0035
ALA 5380.0025
ARG 5390.0037
SER 5400.0059
SER 5410.0069
ALA 5420.0076
LEU 5430.0047
SER 5440.0038
GLU 5450.0051
TYR 5460.0040
LEU 5470.0019
ASP 5480.0028
GLY 5490.0049
GLU 5500.0056
LEU 5510.0049
PHE 5520.0045
PRO 5530.0048
GLY 5540.0112
SER 5550.0274
GLY 5560.0289
VAL 5570.0149
VAL 5580.0253
SER 5590.0204
ASP 5600.0255
ASP 5610.0199
GLN 5620.0059
ILE 5630.0060
ASP 5640.0104
GLU 5650.0103
TYR 5660.0056
ILE 5670.0052
ARG 5680.0103
ARG 5690.0083
SER 5700.0062
ILE 5710.0059
HISD 5720.0068
SER 5730.0065
SER 5740.0073
ASN 5750.0087
ALA 5760.0090
ILE 5770.0085
THR 5780.0102
GLY 5790.0096
THR 5800.0085
CYS 5810.0087
LYS 5820.0094
MET 5830.0087
GLY 5840.0090
ASN 5850.0101
ALA 5860.0105
GLY 5870.0181
ASP 5880.0153
SER 5890.0124
SER 5900.0115
SER 5910.0097
VAL 5920.0073
VAL 5930.0083
ASP 5940.0077
ASN 5950.0062
GLN 5960.0065
LEU 5970.0066
ARG 5980.0065
VAL 5990.0057
HISE 6000.0060
GLY 6010.0063
VAL 6020.0042
GLU 6030.0051
GLY 6040.0059
LEU 6050.0049
ARG 6060.0057
VAL 6070.0069
VAL 6080.0083
ASP 6090.0094
ALA 6100.0108
SER 6110.0100
VAL 6120.0098
VAL 6130.0105
PRO 6140.0103
LYS 6150.0104
ILE 6160.0103
PRO 6170.0099
GLY 6180.0092
GLY 6190.0093
GLN 6200.0086
THR 6210.0091
GLY 6220.0083
ALA 6230.0074
PRO 6240.0083
VAL 6250.0086
VAL 6260.0066
MET 6270.0067
ILE 6280.0079
ALA 6290.0064
GLU 6300.0057
ARG 6310.0071
ALA 6320.0055
ALA 6330.0036
ALA 6340.0059
LEU 6350.0064
LEU 6360.0050
THR 6370.0064
GLY 6380.0127
LYS 6390.0120
ALA 6400.0113
THR 6410.0091
ILE 6420.0084
GLY 6430.0096
ALA 6440.0149
SER 6450.0113
ALA 6460.0124
ALA 6470.0161
ALA 6480.0200
PRO 6490.0123

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.