CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 26  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0806
SER 770.0201
PRO 780.0172
VAL 790.0145
ALA 800.0169
GLY 810.0171
GLN 820.0140
LYS 830.0118
TYR 840.0086
ASP 850.0080
TYR 860.0041
ILE 870.0062
LEU 880.0058
VAL 890.0062
GLY 900.0065
GLY 910.0060
GLY 920.0069
THR 930.0071
ALA 940.0058
ALA 950.0052
CYS 960.0068
VAL 970.0064
LEU 980.0050
ALA 990.0053
ASN 1000.0080
ARG 1010.0074
LEU 1020.0063
SER 1030.0077
ALA 1040.0143
ASP 1050.0162
GLY 1060.0166
SER 1070.0135
LYS 1080.0095
ARG 1090.0033
VAL 1100.0029
LEU 1110.0046
VAL 1120.0052
LEU 1130.0056
GLU 1140.0051
ALA 1150.0058
GLY 1160.0046
PRO 1170.0049
ASP 1180.0045
ASN 1190.0085
THR 1200.0085
SER 1210.0081
ARG 1220.0063
ASP 1230.0062
VAL 1240.0063
LYS 1250.0074
ILE 1260.0061
PRO 1270.0062
ALA 1280.0044
ALA 1290.0041
ILE 1300.0043
THR 1310.0030
ARG 1320.0034
LEU 1330.0042
PHE 1340.0028
ARG 1350.0031
SER 1360.0032
PRO 1370.0049
LEU 1380.0046
ASP 1390.0042
TRP 1400.0026
ASN 1410.0025
LEU 1420.0019
PHE 1430.0044
SER 1440.0046
GLU 1450.0046
LEU 1460.0090
GLN 1470.0080
GLU 1480.0089
GLN 1490.0098
LEU 1500.0096
ALA 1510.0104
GLU 1520.0092
ARG 1530.0089
GLN 1540.0082
ILE 1550.0037
TYR 1560.0033
MET 1570.0038
ALA 1580.0018
ARG 1590.0032
GLY 1600.0046
ARG 1610.0053
LEU 1620.0049
LEU 1630.0043
GLY 1640.0059
GLY 1650.0055
SER 1660.0054
SER 1670.0069
ALA 1680.0062
THR 1690.0062
ASN 1700.0068
ALA 1710.0067
THR 1720.0068
LEU 1730.0059
TYR 1740.0062
HISD 1750.0062
ARG 1760.0077
GLY 1770.0072
ALA 1780.0068
ALA 1790.0077
GLY 1800.0080
ASP 1810.0072
TYR 1820.0074
ASP 1830.0083
ALA 1840.0087
TRP 1850.0082
GLY 1860.0081
VAL 1870.0069
GLU 1880.0082
GLY 1890.0061
TRP 1900.0062
SER 1910.0080
SER 1920.0078
GLU 1930.0075
ASP 1940.0073
VAL 1950.0070
LEU 1960.0071
SER 1970.0073
TRP 1980.0075
PHE 1990.0082
VAL 2000.0094
GLN 2010.0097
ALA 2020.0098
GLU 2030.0100
THR 2040.0094
ASN 2050.0087
ALA 2060.0095
ASP 2070.0103
PHE 2080.0115
GLY 2090.0110
PRO 2100.0126
GLY 2110.0149
ALA 2120.0148
TYR 2130.0123
HISH 2140.0105
GLY 2150.0100
SER 2160.0111
GLY 2170.0105
GLY 2180.0100
PRO 2190.0106
MET 2200.0100
ARG 2210.0087
VAL 2220.0077
GLU 2230.0070
ASN 2240.0061
PRO 2250.0060
ARG 2260.0064
TYR 2270.0043
THR 2280.0039
ASN 2290.0055
LYS 2300.0069
GLN 2310.0077
LEU 2320.0076
HISE 2330.0064
THR 2340.0077
ALA 2350.0089
PHE 2360.0077
PHE 2370.0075
LYS 2380.0092
ALA 2390.0094
ALA 2400.0087
GLU 2410.0097
GLU 2420.0107
VAL 2430.0108
GLY 2440.0108
LEU 2450.0076
THR 2460.0059
PRO 2470.0043
ASN 2480.0033
SER 2490.0053
ASP 2500.0051
PHE 2510.0042
ASN 2520.0072
ASP 2530.0085
TRP 2540.0083
SER 2550.0097
HISE 2560.0081
ASP 2570.0025
HISE 2580.0025
ALA 2590.0026
GLY 2600.0048
TYR 2610.0044
GLY 2620.0025
THR 2630.0029
PHE 2640.0041
GLN 2650.0049
VAL 2660.0068
MET 2670.0076
GLN 2680.0074
ASP 2690.0078
LYS 2700.0078
GLY 2710.0083
THR 2720.0084
ARG 2730.0081
ALA 2740.0080
ASP 2750.0089
MET 2760.0085
TYR 2770.0088
ARG 2780.0103
GLN 2790.0100
TYR 2800.0099
LEU 2810.0089
LYS 2820.0118
PRO 2830.0138
VAL 2840.0129
LEU 2850.0117
GLY 2860.0124
ARG 2870.0132
ARG 2880.0117
ASN 2890.0056
LEU 2900.0006
GLN 2910.0033
VAL 2920.0053
LEU 2930.0058
THR 2940.0057
GLY 2950.0062
ALA 2960.0122
ALA 2970.0107
VAL 2980.0081
THR 2990.0054
LYS 3000.0057
VAL 3010.0079
ASN 3020.0099
ILE 3030.0096
ASP 3040.0111
GLN 3050.0155
ALA 3060.0198
ALA 3070.0222
GLY 3080.0165
LYS 3090.0115
ALA 3100.0120
GLN 3110.0113
ALA 3120.0105
LEU 3130.0125
GLY 3140.0099
VAL 3150.0081
GLU 3160.0055
PHE 3170.0065
SER 3180.0139
THR 3190.0212
ASP 3200.0461
GLY 3210.0561
PRO 3220.0544
THR 3230.0806
GLY 3240.0637
GLU 3250.0415
ARG 3260.0137
LEU 3270.0052
SER 3280.0058
ALA 3290.0112
GLU 3300.0111
LEU 3310.0101
ALA 3320.0131
PRO 3330.0193
GLY 3340.0154
GLY 3350.0062
GLU 3360.0054
VAL 3370.0069
ILE 3380.0049
MET 3390.0059
CYS 3400.0060
ALA 3410.0062
GLY 3420.0051
ALA 3430.0039
VAL 3440.0040
HISD 3450.0045
THR 3460.0048
PRO 3470.0048
PHE 3480.0048
LEU 3490.0061
LEU 3500.0061
LYS 3510.0048
HISE 3520.0063
SER 3530.0083
GLY 3540.0075
VAL 3550.0059
GLY 3560.0051
PRO 3570.0076
SER 3580.0115
ALA 3590.0144
GLU 3600.0096
LEU 3610.0096
LYS 3620.0147
GLU 3630.0124
PHE 3640.0086
GLY 3650.0143
ILE 3660.0128
PRO 3670.0161
VAL 3680.0116
VAL 3690.0104
SER 3700.0080
ASN 3710.0079
LEU 3720.0053
ALA 3730.0054
GLY 3740.0022
VAL 3750.0029
GLY 3760.0029
GLN 3770.0018
ASN 3780.0023
LEU 3790.0034
GLN 3800.0031
ASP 3810.0030
GLN 3820.0025
PRO 3830.0059
ALA 3840.0062
CYS 3850.0062
LEU 3860.0073
THR 3870.0068
ALA 3880.0074
ALA 3890.0084
PRO 3900.0072
VAL 3910.0070
LYS 3920.0089
GLU 3930.0092
LYS 3940.0067
TYR 3950.0074
ASP 3960.0068
GLY 3970.0075
ILE 3980.0069
ALA 3990.0064
ILE 4000.0049
SER 4010.0050
ASP 4020.0063
HISE 4030.0052
ILE 4040.0042
TYR 4050.0073
ASN 4060.0131
GLU 4070.0191
LYS 4080.0203
GLY 4090.0116
GLN 4100.0136
ILE 4110.0090
ARG 4120.0085
LYS 4130.0094
ARG 4140.0057
ALA 4150.0038
ILE 4160.0070
ALA 4170.0087
SER 4180.0107
TYR 4190.0096
LEU 4200.0162
LEU 4210.0211
GLY 4220.0158
GLY 4230.0116
ARG 4240.0098
GLY 4250.0056
GLY 4260.0043
LEU 4270.0043
THR 4280.0054
SER 4290.0054
THR 4300.0053
GLY 4310.0049
CYS 4320.0052
ASP 4330.0045
ARG 4340.0047
GLY 4350.0052
ALA 4360.0051
PHE 4370.0035
VAL 4380.0048
ARG 4390.0057
THR 4400.0038
ALA 4410.0044
GLY 4420.0064
GLN 4430.0125
ALA 4440.0066
LEU 4450.0022
PRO 4460.0033
ASP 4470.0032
LEU 4480.0039
GLN 4490.0046
VAL 4500.0053
ARG 4510.0050
PHE 4520.0070
VAL 4530.0068
PRO 4540.0066
GLY 4550.0076
MET 4560.0073
ALA 4570.0075
LEU 4580.0073
ASP 4590.0076
PRO 4600.0082
ASP 4610.0067
GLY 4620.0053
VAL 4630.0041
SER 4640.0055
THR 4650.0049
TYR 4660.0038
VAL 4670.0047
ARG 4680.0047
PHE 4690.0031
ALA 4700.0036
LYS 4710.0044
PHE 4720.0018
GLN 4730.0059
SER 4740.0099
GLN 4750.0103
GLY 4760.0109
LEU 4770.0084
LYS 4780.0096
TRP 4790.0048
PRO 4800.0068
SER 4810.0077
GLY 4820.0069
ILE 4830.0074
THR 4840.0078
MET 4850.0063
GLN 4860.0063
LEU 4870.0061
ILE 4880.0037
ALA 4890.0029
CYS 4900.0025
ARG 4910.0017
PRO 4920.0035
GLN 4930.0053
SER 4940.0062
THR 4950.0052
GLY 4960.0049
SER 4970.0024
VAL 4980.0029
GLY 4990.0027
LEU 5000.0033
LYS 5010.0039
SER 5020.0044
ALA 5030.0092
ASP 5040.0057
PRO 5050.0059
PHE 5060.0082
ALA 5070.0041
PRO 5080.0044
PRO 5090.0037
LYS 5100.0027
LEU 5110.0031
SER 5120.0051
PRO 5130.0060
GLY 5140.0061
TYR 5150.0084
LEU 5160.0084
THR 5170.0093
ASP 5180.0130
LYS 5190.0132
ASP 5200.0117
GLY 5210.0080
ALA 5220.0062
ASP 5230.0058
LEU 5240.0073
ALA 5250.0054
THR 5260.0039
LEU 5270.0044
ARG 5280.0039
LYS 5290.0023
GLY 5300.0048
ILE 5310.0039
HISE 5320.0036
TRP 5330.0060
ALA 5340.0057
ARG 5350.0052
ASP 5360.0076
VAL 5370.0077
ALA 5380.0078
ARG 5390.0086
SER 5400.0092
SER 5410.0086
ALA 5420.0094
LEU 5430.0088
SER 5440.0096
GLU 5450.0102
TYR 5460.0087
LEU 5470.0090
ASP 5480.0079
GLY 5490.0091
GLU 5500.0084
LEU 5510.0088
PHE 5520.0073
PRO 5530.0061
GLY 5540.0114
SER 5550.0153
GLY 5560.0131
VAL 5570.0178
VAL 5580.0371
SER 5590.0422
ASP 5600.0313
ASP 5610.0325
GLN 5620.0230
ILE 5630.0090
ASP 5640.0127
GLU 5650.0154
TYR 5660.0069
ILE 5670.0076
ARG 5680.0103
ARG 5690.0078
SER 5700.0073
ILE 5710.0080
HISD 5720.0060
SER 5730.0050
SER 5740.0041
ASN 5750.0020
ALA 5760.0022
ILE 5770.0027
THR 5780.0036
GLY 5790.0031
THR 5800.0032
CYS 5810.0046
LYS 5820.0045
MET 5830.0047
GLY 5840.0072
ASN 5850.0098
ALA 5860.0117
GLY 5870.0081
ASP 5880.0069
SER 5890.0053
SER 5900.0048
SER 5910.0045
VAL 5920.0042
VAL 5930.0052
ASP 5940.0059
ASN 5950.0060
GLN 5960.0058
LEU 5970.0046
ARG 5980.0050
VAL 5990.0053
HISE 6000.0046
GLY 6010.0060
VAL 6020.0071
GLU 6030.0085
GLY 6040.0092
LEU 6050.0058
ARG 6060.0047
VAL 6070.0052
VAL 6080.0043
ASP 6090.0051
ALA 6100.0050
SER 6110.0051
VAL 6120.0047
VAL 6130.0047
PRO 6140.0047
LYS 6150.0046
ILE 6160.0036
PRO 6170.0038
GLY 6180.0029
GLY 6190.0026
GLN 6200.0021
THR 6210.0032
GLY 6220.0042
ALA 6230.0067
PRO 6240.0061
VAL 6250.0060
VAL 6260.0075
MET 6270.0067
ILE 6280.0058
ALA 6290.0066
GLU 6300.0070
ARG 6310.0060
ALA 6320.0048
ALA 6330.0061
ALA 6340.0077
LEU 6350.0067
LEU 6360.0070
THR 6370.0108
GLY 6380.0206
LYS 6390.0190
ALA 6400.0122
THR 6410.0114
ILE 6420.0104
GLY 6430.0128
ALA 6440.0136
SER 6450.0163
ALA 6460.0181
ALA 6470.0238
ALA 6480.0188
PRO 6490.0069

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.