CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 27  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0530
SER 770.0110
PRO 780.0089
VAL 790.0058
ALA 800.0080
GLY 810.0104
GLN 820.0088
LYS 830.0073
TYR 840.0041
ASP 850.0058
TYR 860.0037
ILE 870.0032
LEU 880.0055
VAL 890.0057
GLY 900.0067
GLY 910.0069
GLY 920.0071
THR 930.0067
ALA 940.0059
ALA 950.0057
CYS 960.0050
VAL 970.0053
LEU 980.0055
ALA 990.0025
ASN 1000.0016
ARG 1010.0046
LEU 1020.0045
SER 1030.0040
ALA 1040.0064
ASP 1050.0122
GLY 1060.0158
SER 1070.0150
LYS 1080.0099
ARG 1090.0074
VAL 1100.0017
LEU 1110.0025
VAL 1120.0050
LEU 1130.0057
GLU 1140.0073
ALA 1150.0081
GLY 1160.0093
PRO 1170.0097
ASP 1180.0097
ASN 1190.0106
THR 1200.0111
SER 1210.0119
ARG 1220.0115
ASP 1230.0114
VAL 1240.0109
LYS 1250.0098
ILE 1260.0099
PRO 1270.0099
ALA 1280.0088
ALA 1290.0093
ILE 1300.0095
THR 1310.0091
ARG 1320.0086
LEU 1330.0097
PHE 1340.0077
ARG 1350.0063
SER 1360.0060
PRO 1370.0068
LEU 1380.0080
ASP 1390.0077
TRP 1400.0043
ASN 1410.0039
LEU 1420.0038
PHE 1430.0013
SER 1440.0013
GLU 1450.0042
LEU 1460.0075
GLN 1470.0054
GLU 1480.0088
GLN 1490.0052
LEU 1500.0035
ALA 1510.0058
GLU 1520.0093
ARG 1530.0072
GLN 1540.0050
ILE 1550.0033
TYR 1560.0035
MET 1570.0037
ALA 1580.0044
ARG 1590.0045
GLY 1600.0050
ARG 1610.0081
LEU 1620.0084
LEU 1630.0086
GLY 1640.0078
GLY 1650.0079
SER 1660.0079
SER 1670.0080
ALA 1680.0085
THR 1690.0093
ASN 1700.0067
ALA 1710.0062
THR 1720.0056
LEU 1730.0061
TYR 1740.0061
HISD 1750.0069
ARG 1760.0113
GLY 1770.0106
ALA 1780.0102
ALA 1790.0113
GLY 1800.0107
ASP 1810.0106
TYR 1820.0097
ASP 1830.0093
ALA 1840.0098
TRP 1850.0073
GLY 1860.0059
VAL 1870.0045
GLU 1880.0058
GLY 1890.0074
TRP 1900.0063
SER 1910.0084
SER 1920.0112
GLU 1930.0115
ASP 1940.0108
VAL 1950.0119
LEU 1960.0138
SER 1970.0144
TRP 1980.0130
PHE 1990.0136
VAL 2000.0139
GLN 2010.0125
ALA 2020.0107
GLU 2030.0099
THR 2040.0107
ASN 2050.0127
ALA 2060.0130
ASP 2070.0156
PHE 2080.0186
GLY 2090.0190
PRO 2100.0191
GLY 2110.0206
ALA 2120.0163
TYR 2130.0140
HISH 2140.0145
GLY 2150.0150
SER 2160.0153
GLY 2170.0129
GLY 2180.0081
PRO 2190.0049
MET 2200.0059
ARG 2210.0035
VAL 2220.0062
GLU 2230.0067
ASN 2240.0051
PRO 2250.0065
ARG 2260.0071
TYR 2270.0062
THR 2280.0062
ASN 2290.0052
LYS 2300.0064
GLN 2310.0053
LEU 2320.0039
HISE 2330.0054
THR 2340.0072
ALA 2350.0069
PHE 2360.0062
PHE 2370.0077
LYS 2380.0097
ALA 2390.0092
ALA 2400.0093
GLU 2410.0113
GLU 2420.0124
VAL 2430.0126
GLY 2440.0129
LEU 2450.0069
THR 2460.0059
PRO 2470.0045
ASN 2480.0031
SER 2490.0043
ASP 2500.0069
PHE 2510.0076
ASN 2520.0084
ASP 2530.0089
TRP 2540.0098
SER 2550.0084
HISE 2560.0068
ASP 2570.0033
HISE 2580.0046
ALA 2590.0042
GLY 2600.0021
TYR 2610.0023
GLY 2620.0018
THR 2630.0033
PHE 2640.0039
GLN 2650.0055
VAL 2660.0064
MET 2670.0052
GLN 2680.0046
ASP 2690.0048
LYS 2700.0059
GLY 2710.0078
THR 2720.0076
ARG 2730.0073
ALA 2740.0057
ASP 2750.0080
MET 2760.0061
TYR 2770.0068
ARG 2780.0069
GLN 2790.0038
TYR 2800.0026
LEU 2810.0044
LYS 2820.0074
PRO 2830.0066
VAL 2840.0072
LEU 2850.0104
GLY 2860.0145
ARG 2870.0175
ARG 2880.0220
ASN 2890.0128
LEU 2900.0064
GLN 2910.0075
VAL 2920.0086
LEU 2930.0077
THR 2940.0093
GLY 2950.0098
ALA 2960.0056
ALA 2970.0058
VAL 2980.0051
THR 2990.0056
LYS 3000.0056
VAL 3010.0056
ASN 3020.0065
ILE 3030.0057
ASP 3040.0059
GLN 3050.0051
ALA 3060.0130
ALA 3070.0186
GLY 3080.0176
LYS 3090.0119
ALA 3100.0077
GLN 3110.0071
ALA 3120.0074
LEU 3130.0098
GLY 3140.0049
VAL 3150.0051
GLU 3160.0050
PHE 3170.0041
SER 3180.0044
THR 3190.0053
ASP 3200.0041
GLY 3210.0034
PRO 3220.0036
THR 3230.0076
GLY 3240.0064
GLU 3250.0067
ARG 3260.0041
LEU 3270.0033
SER 3280.0031
ALA 3290.0016
GLU 3300.0019
LEU 3310.0036
ALA 3320.0088
PRO 3330.0142
GLY 3340.0127
GLY 3350.0052
GLU 3360.0065
VAL 3370.0064
ILE 3380.0069
MET 3390.0071
CYS 3400.0081
ALA 3410.0065
GLY 3420.0058
ALA 3430.0052
VAL 3440.0046
HISD 3450.0048
THR 3460.0045
PRO 3470.0036
PHE 3480.0041
LEU 3490.0044
LEU 3500.0031
LYS 3510.0024
HISE 3520.0045
SER 3530.0046
GLY 3540.0022
VAL 3550.0007
GLY 3560.0036
PRO 3570.0096
SER 3580.0118
ALA 3590.0194
GLU 3600.0157
LEU 3610.0122
LYS 3620.0186
GLU 3630.0223
PHE 3640.0179
GLY 3650.0196
ILE 3660.0130
PRO 3670.0104
VAL 3680.0050
VAL 3690.0012
SER 3700.0052
ASN 3710.0071
LEU 3720.0057
ALA 3730.0074
GLY 3740.0020
VAL 3750.0003
GLY 3760.0031
GLN 3770.0040
ASN 3780.0042
LEU 3790.0047
GLN 3800.0058
ASP 3810.0054
GLN 3820.0062
PRO 3830.0076
ALA 3840.0077
CYS 3850.0072
LEU 3860.0101
THR 3870.0098
ALA 3880.0103
ALA 3890.0150
PRO 3900.0145
VAL 3910.0120
LYS 3920.0271
GLU 3930.0438
LYS 3940.0455
TYR 3950.0233
ASP 3960.0224
GLY 3970.0144
ILE 3980.0039
ALA 3990.0045
ILE 4000.0036
SER 4010.0075
ASP 4020.0050
HISE 4030.0032
ILE 4040.0061
TYR 4050.0063
ASN 4060.0084
GLU 4070.0132
LYS 4080.0109
GLY 4090.0072
GLN 4100.0086
ILE 4110.0077
ARG 4120.0079
LYS 4130.0098
ARG 4140.0106
ALA 4150.0076
ILE 4160.0081
ALA 4170.0108
SER 4180.0143
TYR 4190.0123
LEU 4200.0147
LEU 4210.0202
GLY 4220.0166
GLY 4230.0124
ARG 4240.0119
GLY 4250.0088
GLY 4260.0080
LEU 4270.0078
THR 4280.0074
SER 4290.0072
THR 4300.0067
GLY 4310.0036
CYS 4320.0027
ASP 4330.0028
ARG 4340.0012
GLY 4350.0011
ALA 4360.0022
PHE 4370.0037
VAL 4380.0049
ARG 4390.0082
THR 4400.0086
ALA 4410.0125
GLY 4420.0158
GLN 4430.0272
ALA 4440.0153
LEU 4450.0072
PRO 4460.0071
ASP 4470.0086
LEU 4480.0074
GLN 4490.0046
VAL 4500.0049
ARG 4510.0048
PHE 4520.0059
VAL 4530.0059
PRO 4540.0055
GLY 4550.0096
MET 4560.0110
ALA 4570.0125
LEU 4580.0114
ASP 4590.0112
PRO 4600.0100
ASP 4610.0099
GLY 4620.0102
VAL 4630.0091
SER 4640.0107
THR 4650.0107
TYR 4660.0094
VAL 4670.0111
ARG 4680.0108
PHE 4690.0101
ALA 4700.0112
LYS 4710.0114
PHE 4720.0101
GLN 4730.0095
SER 4740.0122
GLN 4750.0107
GLY 4760.0082
LEU 4770.0093
LYS 4780.0109
TRP 4790.0111
PRO 4800.0130
SER 4810.0122
GLY 4820.0091
ILE 4830.0089
THR 4840.0103
MET 4850.0087
GLN 4860.0083
LEU 4870.0080
ILE 4880.0073
ALA 4890.0077
CYS 4900.0088
ARG 4910.0093
PRO 4920.0085
GLN 4930.0085
SER 4940.0079
THR 4950.0067
GLY 4960.0057
SER 4970.0040
VAL 4980.0041
GLY 4990.0039
LEU 5000.0048
LYS 5010.0055
SER 5020.0073
ALA 5030.0055
ASP 5040.0067
PRO 5050.0059
PHE 5060.0045
ALA 5070.0048
PRO 5080.0053
PRO 5090.0050
LYS 5100.0046
LEU 5110.0033
SER 5120.0044
PRO 5130.0046
GLY 5140.0052
TYR 5150.0064
LEU 5160.0062
THR 5170.0072
ASP 5180.0101
LYS 5190.0090
ASP 5200.0083
GLY 5210.0091
ALA 5220.0090
ASP 5230.0084
LEU 5240.0077
ALA 5250.0082
THR 5260.0091
LEU 5270.0080
ARG 5280.0067
LYS 5290.0074
GLY 5300.0091
ILE 5310.0076
HISE 5320.0066
TRP 5330.0084
ALA 5340.0079
ARG 5350.0073
ASP 5360.0109
VAL 5370.0098
ALA 5380.0092
ARG 5390.0100
SER 5400.0093
SER 5410.0079
ALA 5420.0074
LEU 5430.0071
SER 5440.0080
GLU 5450.0049
TYR 5460.0057
LEU 5470.0104
ASP 5480.0134
GLY 5490.0147
GLU 5500.0146
LEU 5510.0099
PHE 5520.0098
PRO 5530.0082
GLY 5540.0075
SER 5550.0193
GLY 5560.0266
VAL 5570.0135
VAL 5580.0235
SER 5590.0207
ASP 5600.0175
ASP 5610.0104
GLN 5620.0062
ILE 5630.0032
ASP 5640.0054
GLU 5650.0034
TYR 5660.0045
ILE 5670.0057
ARG 5680.0054
ARG 5690.0051
SER 5700.0067
ILE 5710.0072
HISD 5720.0045
SER 5730.0049
SER 5740.0065
ASN 5750.0021
ALA 5760.0041
ILE 5770.0045
THR 5780.0056
GLY 5790.0048
THR 5800.0045
CYS 5810.0038
LYS 5820.0034
MET 5830.0044
GLY 5840.0054
ASN 5850.0114
ALA 5860.0199
GLY 5870.0243
ASP 5880.0171
SER 5890.0114
SER 5900.0077
SER 5910.0048
VAL 5920.0040
VAL 5930.0059
ASP 5940.0076
ASN 5950.0078
GLN 5960.0087
LEU 5970.0074
ARG 5980.0078
VAL 5990.0069
HISE 6000.0075
GLY 6010.0088
VAL 6020.0064
GLU 6030.0091
GLY 6040.0099
LEU 6050.0069
ARG 6060.0075
VAL 6070.0075
VAL 6080.0076
ASP 6090.0074
ALA 6100.0069
SER 6110.0059
VAL 6120.0056
VAL 6130.0059
PRO 6140.0057
LYS 6150.0071
ILE 6160.0073
PRO 6170.0079
GLY 6180.0074
GLY 6190.0073
GLN 6200.0048
THR 6210.0054
GLY 6220.0081
ALA 6230.0089
PRO 6240.0091
VAL 6250.0087
VAL 6260.0089
MET 6270.0101
ILE 6280.0091
ALA 6290.0092
GLU 6300.0104
ARG 6310.0101
ALA 6320.0101
ALA 6330.0103
ALA 6340.0129
LEU 6350.0114
LEU 6360.0096
THR 6370.0122
GLY 6380.0232
LYS 6390.0254
ALA 6400.0169
THR 6410.0121
ILE 6420.0090
GLY 6430.0131
ALA 6440.0362
SER 6450.0311
ALA 6460.0159
ALA 6470.0395
ALA 6480.0080
PRO 6490.0530

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.