CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 32  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0526
SER 770.0239
PRO 780.0170
VAL 790.0137
ALA 800.0202
GLY 810.0247
GLN 820.0205
LYS 830.0183
TYR 840.0127
ASP 850.0146
TYR 860.0081
ILE 870.0056
LEU 880.0060
VAL 890.0061
GLY 900.0066
GLY 910.0068
GLY 920.0059
THR 930.0067
ALA 940.0070
ALA 950.0071
CYS 960.0062
VAL 970.0071
LEU 980.0067
ALA 990.0049
ASN 1000.0052
ARG 1010.0068
LEU 1020.0072
SER 1030.0062
ALA 1040.0099
ASP 1050.0181
GLY 1060.0221
SER 1070.0230
LYS 1080.0178
ARG 1090.0151
VAL 1100.0063
LEU 1110.0031
VAL 1120.0016
LEU 1130.0038
GLU 1140.0056
ALA 1150.0065
GLY 1160.0071
PRO 1170.0069
ASP 1180.0066
ASN 1190.0080
THR 1200.0085
SER 1210.0079
ARG 1220.0090
ASP 1230.0079
VAL 1240.0071
LYS 1250.0068
ILE 1260.0064
PRO 1270.0052
ALA 1280.0053
ALA 1290.0059
ILE 1300.0055
THR 1310.0067
ARG 1320.0071
LEU 1330.0066
PHE 1340.0062
ARG 1350.0062
SER 1360.0067
PRO 1370.0066
LEU 1380.0067
ASP 1390.0060
TRP 1400.0046
ASN 1410.0042
LEU 1420.0042
PHE 1430.0064
SER 1440.0074
GLU 1450.0082
LEU 1460.0130
GLN 1470.0104
GLU 1480.0134
GLN 1490.0085
LEU 1500.0089
ALA 1510.0111
GLU 1520.0147
ARG 1530.0130
GLN 1540.0108
ILE 1550.0065
TYR 1560.0053
MET 1570.0059
ALA 1580.0042
ARG 1590.0044
GLY 1600.0056
ARG 1610.0068
LEU 1620.0067
LEU 1630.0066
GLY 1640.0071
GLY 1650.0067
SER 1660.0063
SER 1670.0064
ALA 1680.0060
THR 1690.0062
ASN 1700.0040
ALA 1710.0039
THR 1720.0032
LEU 1730.0063
TYR 1740.0055
HISD 1750.0069
ARG 1760.0056
GLY 1770.0076
ALA 1780.0094
ALA 1790.0091
GLY 1800.0092
ASP 1810.0080
TYR 1820.0064
ASP 1830.0077
ALA 1840.0080
TRP 1850.0062
GLY 1860.0063
VAL 1870.0046
GLU 1880.0049
GLY 1890.0031
TRP 1900.0030
SER 1910.0064
SER 1920.0079
GLU 1930.0091
ASP 1940.0059
VAL 1950.0041
LEU 1960.0071
SER 1970.0068
TRP 1980.0055
PHE 1990.0042
VAL 2000.0117
GLN 2010.0135
ALA 2020.0102
GLU 2030.0117
THR 2040.0146
ASN 2050.0169
ALA 2060.0228
ASP 2070.0267
PHE 2080.0326
GLY 2090.0341
PRO 2100.0354
GLY 2110.0389
ALA 2120.0294
TYR 2130.0200
HISH 2140.0198
GLY 2150.0195
SER 2160.0251
GLY 2170.0211
GLY 2180.0126
PRO 2190.0110
MET 2200.0067
ARG 2210.0059
VAL 2220.0043
GLU 2230.0054
ASN 2240.0061
PRO 2250.0073
ARG 2260.0062
TYR 2270.0066
THR 2280.0060
ASN 2290.0048
LYS 2300.0071
GLN 2310.0051
LEU 2320.0041
HISE 2330.0059
THR 2340.0093
ALA 2350.0090
PHE 2360.0053
PHE 2370.0101
LYS 2380.0123
ALA 2390.0093
ALA 2400.0097
GLU 2410.0136
GLU 2420.0163
VAL 2430.0136
GLY 2440.0156
LEU 2450.0095
THR 2460.0120
PRO 2470.0126
ASN 2480.0141
SER 2490.0159
ASP 2500.0146
PHE 2510.0120
ASN 2520.0096
ASP 2530.0111
TRP 2540.0102
SER 2550.0113
HISE 2560.0126
ASP 2570.0127
HISE 2580.0115
ALA 2590.0123
GLY 2600.0114
TYR 2610.0103
GLY 2620.0133
THR 2630.0113
PHE 2640.0100
GLN 2650.0083
VAL 2660.0039
MET 2670.0031
GLN 2680.0037
ASP 2690.0053
LYS 2700.0054
GLY 2710.0056
THR 2720.0054
ARG 2730.0057
ALA 2740.0062
ASP 2750.0076
MET 2760.0073
TYR 2770.0065
ARG 2780.0083
GLN 2790.0085
TYR 2800.0084
LEU 2810.0060
LYS 2820.0066
PRO 2830.0058
VAL 2840.0034
LEU 2850.0063
GLY 2860.0119
ARG 2870.0180
ARG 2880.0264
ASN 2890.0179
LEU 2900.0066
GLN 2910.0070
VAL 2920.0059
LEU 2930.0043
THR 2940.0066
GLY 2950.0080
ALA 2960.0056
ALA 2970.0063
VAL 2980.0066
THR 2990.0086
LYS 3000.0083
VAL 3010.0079
ASN 3020.0107
ILE 3030.0091
ASP 3040.0124
GLN 3050.0210
ALA 3060.0392
ALA 3070.0526
GLY 3080.0437
LYS 3090.0256
ALA 3100.0178
GLN 3110.0136
ALA 3120.0103
LEU 3130.0161
GLY 3140.0083
VAL 3150.0081
GLU 3160.0075
PHE 3170.0040
SER 3180.0028
THR 3190.0078
ASP 3200.0109
GLY 3210.0075
PRO 3220.0024
THR 3230.0051
GLY 3240.0097
GLU 3250.0121
ARG 3260.0031
LEU 3270.0036
SER 3280.0046
ALA 3290.0041
GLU 3300.0079
LEU 3310.0096
ALA 3320.0210
PRO 3330.0291
GLY 3340.0261
GLY 3350.0105
GLU 3360.0101
VAL 3370.0084
ILE 3380.0070
MET 3390.0067
CYS 3400.0070
ALA 3410.0062
GLY 3420.0051
ALA 3430.0044
VAL 3440.0055
HISD 3450.0052
THR 3460.0050
PRO 3470.0043
PHE 3480.0053
LEU 3490.0059
LEU 3500.0045
LYS 3510.0044
HISE 3520.0062
SER 3530.0061
GLY 3540.0044
VAL 3550.0041
GLY 3560.0063
PRO 3570.0088
SER 3580.0086
ALA 3590.0097
GLU 3600.0087
LEU 3610.0055
LYS 3620.0059
GLU 3630.0082
PHE 3640.0082
GLY 3650.0068
ILE 3660.0067
PRO 3670.0082
VAL 3680.0075
VAL 3690.0091
SER 3700.0098
ASN 3710.0097
LEU 3720.0086
ALA 3730.0097
GLY 3740.0050
VAL 3750.0036
GLY 3760.0045
GLN 3770.0037
ASN 3780.0038
LEU 3790.0042
GLN 3800.0043
ASP 3810.0054
GLN 3820.0056
PRO 3830.0061
ALA 3840.0063
CYS 3850.0058
LEU 3860.0037
THR 3870.0027
ALA 3880.0029
ALA 3890.0081
PRO 3900.0110
VAL 3910.0122
LYS 3920.0267
GLU 3930.0299
LYS 3940.0281
TYR 3950.0166
ASP 3960.0170
GLY 3970.0135
ILE 3980.0047
ALA 3990.0036
ILE 4000.0045
SER 4010.0032
ASP 4020.0036
HISE 4030.0053
ILE 4040.0042
TYR 4050.0035
ASN 4060.0031
GLU 4070.0062
LYS 4080.0103
GLY 4090.0092
GLN 4100.0074
ILE 4110.0062
ARG 4120.0036
LYS 4130.0052
ARG 4140.0048
ALA 4150.0055
ILE 4160.0068
ALA 4170.0065
SER 4180.0065
TYR 4190.0066
LEU 4200.0081
LEU 4210.0073
GLY 4220.0064
GLY 4230.0064
ARG 4240.0056
GLY 4250.0050
GLY 4260.0052
LEU 4270.0056
THR 4280.0046
SER 4290.0050
THR 4300.0052
GLY 4310.0072
CYS 4320.0076
ASP 4330.0078
ARG 4340.0097
GLY 4350.0099
ALA 4360.0101
PHE 4370.0123
VAL 4380.0110
ARG 4390.0106
THR 4400.0081
ALA 4410.0102
GLY 4420.0172
GLN 4430.0466
ALA 4440.0283
LEU 4450.0109
PRO 4460.0069
ASP 4470.0041
LEU 4480.0057
GLN 4490.0080
VAL 4500.0073
ARG 4510.0077
PHE 4520.0036
VAL 4530.0040
PRO 4540.0029
GLY 4550.0044
MET 4560.0047
ALA 4570.0039
LEU 4580.0025
ASP 4590.0018
PRO 4600.0039
ASP 4610.0047
GLY 4620.0052
VAL 4630.0048
SER 4640.0033
THR 4650.0040
TYR 4660.0046
VAL 4670.0072
ARG 4680.0062
PHE 4690.0069
ALA 4700.0112
LYS 4710.0113
PHE 4720.0103
GLN 4730.0126
SER 4740.0174
GLN 4750.0174
GLY 4760.0143
LEU 4770.0107
LYS 4780.0053
TRP 4790.0043
PRO 4800.0031
SER 4810.0053
GLY 4820.0066
ILE 4830.0034
THR 4840.0023
MET 4850.0023
GLN 4860.0045
LEU 4870.0053
ILE 4880.0063
ALA 4890.0052
CYS 4900.0051
ARG 4910.0045
PRO 4920.0041
GLN 4930.0031
SER 4940.0043
THR 4950.0035
GLY 4960.0038
SER 4970.0053
VAL 4980.0051
GLY 4990.0051
LEU 5000.0075
LYS 5010.0082
SER 5020.0080
ALA 5030.0090
ASP 5040.0086
PRO 5050.0078
PHE 5060.0065
ALA 5070.0062
PRO 5080.0061
PRO 5090.0058
LYS 5100.0071
LEU 5110.0070
SER 5120.0063
PRO 5130.0059
GLY 5140.0068
TYR 5150.0062
LEU 5160.0052
THR 5170.0058
ASP 5180.0067
LYS 5190.0074
ASP 5200.0062
GLY 5210.0043
ALA 5220.0023
ASP 5230.0030
LEU 5240.0035
ALA 5250.0027
THR 5260.0024
LEU 5270.0040
ARG 5280.0032
LYS 5290.0025
GLY 5300.0027
ILE 5310.0023
HISE 5320.0009
TRP 5330.0026
ALA 5340.0007
ARG 5350.0026
ASP 5360.0105
VAL 5370.0082
ALA 5380.0074
ARG 5390.0134
SER 5400.0146
SER 5410.0169
ALA 5420.0141
LEU 5430.0107
SER 5440.0151
GLU 5450.0189
TYR 5460.0127
LEU 5470.0147
ASP 5480.0191
GLY 5490.0166
GLU 5500.0102
LEU 5510.0047
PHE 5520.0034
PRO 5530.0034
GLY 5540.0067
SER 5550.0064
GLY 5560.0079
VAL 5570.0061
VAL 5580.0108
SER 5590.0125
ASP 5600.0108
ASP 5610.0094
GLN 5620.0065
ILE 5630.0047
ASP 5640.0056
GLU 5650.0045
TYR 5660.0047
ILE 5670.0048
ARG 5680.0055
ARG 5690.0060
SER 5700.0060
ILE 5710.0068
HISD 5720.0072
SER 5730.0070
SER 5740.0064
ASN 5750.0053
ALA 5760.0046
ILE 5770.0044
THR 5780.0040
GLY 5790.0035
THR 5800.0034
CYS 5810.0027
LYS 5820.0033
MET 5830.0024
GLY 5840.0067
ASN 5850.0110
ALA 5860.0186
GLY 5870.0290
ASP 5880.0220
SER 5890.0165
SER 5900.0115
SER 5910.0079
VAL 5920.0047
VAL 5930.0020
ASP 5940.0032
ASN 5950.0018
GLN 5960.0020
LEU 5970.0017
ARG 5980.0021
VAL 5990.0050
HISE 6000.0092
GLY 6010.0126
VAL 6020.0084
GLU 6030.0109
GLY 6040.0115
LEU 6050.0055
ARG 6060.0052
VAL 6070.0052
VAL 6080.0049
ASP 6090.0055
ALA 6100.0052
SER 6110.0042
VAL 6120.0026
VAL 6130.0035
PRO 6140.0040
LYS 6150.0048
ILE 6160.0054
PRO 6170.0060
GLY 6180.0072
GLY 6190.0076
GLN 6200.0061
THR 6210.0039
GLY 6220.0026
ALA 6230.0032
PRO 6240.0021
VAL 6250.0041
VAL 6260.0057
MET 6270.0037
ILE 6280.0043
ALA 6290.0074
GLU 6300.0069
ARG 6310.0062
ALA 6320.0067
ALA 6330.0071
ALA 6340.0077
LEU 6350.0079
LEU 6360.0079
THR 6370.0102
GLY 6380.0135
LYS 6390.0149
ALA 6400.0083
THR 6410.0050
ILE 6420.0035
GLY 6430.0057
ALA 6440.0120
SER 6450.0170
ALA 6460.0184
ALA 6470.0227
ALA 6480.0126
PRO 6490.0110

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.