CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0548
SER 770.0236
PRO 780.0179
VAL 790.0117
ALA 800.0159
GLY 810.0116
GLN 820.0063
LYS 830.0043
TYR 840.0037
ASP 850.0040
TYR 860.0027
ILE 870.0030
LEU 880.0028
VAL 890.0031
GLY 900.0018
GLY 910.0020
GLY 920.0052
THR 930.0056
ALA 940.0047
ALA 950.0045
CYS 960.0056
VAL 970.0060
LEU 980.0049
ALA 990.0045
ASN 1000.0058
ARG 1010.0057
LEU 1020.0038
SER 1030.0035
ALA 1040.0074
ASP 1050.0041
GLY 1060.0043
SER 1070.0033
LYS 1080.0030
ARG 1090.0040
VAL 1100.0022
LEU 1110.0028
VAL 1120.0031
LEU 1130.0042
GLU 1140.0039
ALA 1150.0036
GLY 1160.0055
PRO 1170.0067
ASP 1180.0089
ASN 1190.0118
THR 1200.0129
SER 1210.0131
ARG 1220.0121
ASP 1230.0119
VAL 1240.0122
LYS 1250.0109
ILE 1260.0094
PRO 1270.0100
ALA 1280.0084
ALA 1290.0088
ILE 1300.0097
THR 1310.0084
ARG 1320.0086
LEU 1330.0095
PHE 1340.0067
ARG 1350.0056
SER 1360.0064
PRO 1370.0068
LEU 1380.0080
ASP 1390.0068
TRP 1400.0057
ASN 1410.0057
LEU 1420.0063
PHE 1430.0096
SER 1440.0099
GLU 1450.0102
LEU 1460.0143
GLN 1470.0112
GLU 1480.0139
GLN 1490.0091
LEU 1500.0099
ALA 1510.0124
GLU 1520.0156
ARG 1530.0151
GLN 1540.0146
ILE 1550.0094
TYR 1560.0087
MET 1570.0090
ALA 1580.0062
ARG 1590.0065
GLY 1600.0067
ARG 1610.0062
LEU 1620.0069
LEU 1630.0075
GLY 1640.0094
GLY 1650.0083
SER 1660.0084
SER 1670.0105
ALA 1680.0105
THR 1690.0108
ASN 1700.0088
ALA 1710.0076
THR 1720.0072
LEU 1730.0050
TYR 1740.0047
HISD 1750.0045
ARG 1760.0057
GLY 1770.0053
ALA 1780.0042
ALA 1790.0049
GLY 1800.0052
ASP 1810.0045
TYR 1820.0050
ASP 1830.0077
ALA 1840.0078
TRP 1850.0084
GLY 1860.0107
VAL 1870.0089
GLU 1880.0076
GLY 1890.0056
TRP 1900.0047
SER 1910.0049
SER 1920.0050
GLU 1930.0069
ASP 1940.0045
VAL 1950.0046
LEU 1960.0050
SER 1970.0069
TRP 1980.0069
PHE 1990.0071
VAL 2000.0091
GLN 2010.0088
ALA 2020.0078
GLU 2030.0068
THR 2040.0037
ASN 2050.0091
ALA 2060.0180
ASP 2070.0220
PHE 2080.0246
GLY 2090.0263
PRO 2100.0260
GLY 2110.0332
ALA 2120.0294
TYR 2130.0207
HISH 2140.0156
GLY 2150.0098
SER 2160.0104
GLY 2170.0036
GLY 2180.0054
PRO 2190.0055
MET 2200.0056
ARG 2210.0027
VAL 2220.0033
GLU 2230.0024
ASN 2240.0047
PRO 2250.0047
ARG 2260.0049
TYR 2270.0058
THR 2280.0059
ASN 2290.0056
LYS 2300.0056
GLN 2310.0042
LEU 2320.0043
HISE 2330.0044
THR 2340.0038
ALA 2350.0036
PHE 2360.0034
PHE 2370.0029
LYS 2380.0026
ALA 2390.0036
ALA 2400.0032
GLU 2410.0025
GLU 2420.0033
VAL 2430.0038
GLY 2440.0029
LEU 2450.0025
THR 2460.0022
PRO 2470.0024
ASN 2480.0030
SER 2490.0040
ASP 2500.0047
PHE 2510.0045
ASN 2520.0053
ASP 2530.0070
TRP 2540.0059
SER 2550.0092
HISE 2560.0097
ASP 2570.0055
HISE 2580.0043
ALA 2590.0041
GLY 2600.0026
TYR 2610.0025
GLY 2620.0026
THR 2630.0026
PHE 2640.0031
GLN 2650.0035
VAL 2660.0054
MET 2670.0052
GLN 2680.0043
ASP 2690.0048
LYS 2700.0032
GLY 2710.0044
THR 2720.0079
ARG 2730.0085
ALA 2740.0077
ASP 2750.0098
MET 2760.0095
TYR 2770.0096
ARG 2780.0101
GLN 2790.0085
TYR 2800.0085
LEU 2810.0086
LYS 2820.0101
PRO 2830.0115
VAL 2840.0101
LEU 2850.0092
GLY 2860.0098
ARG 2870.0101
ARG 2880.0111
ASN 2890.0073
LEU 2900.0012
GLN 2910.0015
VAL 2920.0021
LEU 2930.0056
THR 2940.0055
GLY 2950.0052
ALA 2960.0093
ALA 2970.0071
VAL 2980.0051
THR 2990.0035
LYS 3000.0027
VAL 3010.0035
ASN 3020.0055
ILE 3030.0035
ASP 3040.0078
GLN 3050.0235
ALA 3060.0314
ALA 3070.0548
GLY 3080.0414
LYS 3090.0253
ALA 3100.0154
GLN 3110.0113
ALA 3120.0043
LEU 3130.0034
GLY 3140.0037
VAL 3150.0041
GLU 3160.0054
PHE 3170.0052
SER 3180.0120
THR 3190.0195
ASP 3200.0352
GLY 3210.0286
PRO 3220.0327
THR 3230.0442
GLY 3240.0167
GLU 3250.0541
ARG 3260.0110
LEU 3270.0138
SER 3280.0118
ALA 3290.0068
GLU 3300.0052
LEU 3310.0036
ALA 3320.0065
PRO 3330.0145
GLY 3340.0129
GLY 3350.0036
GLU 3360.0039
VAL 3370.0046
ILE 3380.0038
MET 3390.0041
CYS 3400.0029
ALA 3410.0034
GLY 3420.0035
ALA 3430.0044
VAL 3440.0050
HISD 3450.0057
THR 3460.0063
PRO 3470.0072
PHE 3480.0076
LEU 3490.0067
LEU 3500.0072
LYS 3510.0069
HISE 3520.0062
SER 3530.0054
GLY 3540.0030
VAL 3550.0040
GLY 3560.0077
PRO 3570.0117
SER 3580.0123
ALA 3590.0260
GLU 3600.0190
LEU 3610.0113
LYS 3620.0231
GLU 3630.0230
PHE 3640.0118
GLY 3650.0173
ILE 3660.0121
PRO 3670.0172
VAL 3680.0057
VAL 3690.0034
SER 3700.0049
ASN 3710.0053
LEU 3720.0074
ALA 3730.0081
GLY 3740.0076
VAL 3750.0078
GLY 3760.0073
GLN 3770.0071
ASN 3780.0067
LEU 3790.0060
GLN 3800.0056
ASP 3810.0055
GLN 3820.0049
PRO 3830.0052
ALA 3840.0048
CYS 3850.0039
LEU 3860.0031
THR 3870.0030
ALA 3880.0038
ALA 3890.0054
PRO 3900.0064
VAL 3910.0067
LYS 3920.0129
GLU 3930.0179
LYS 3940.0172
TYR 3950.0088
ASP 3960.0092
GLY 3970.0095
ILE 3980.0050
ALA 3990.0048
ILE 4000.0047
SER 4010.0046
ASP 4020.0042
HISE 4030.0046
ILE 4040.0049
TYR 4050.0047
ASN 4060.0045
GLU 4070.0047
LYS 4080.0065
GLY 4090.0057
GLN 4100.0047
ILE 4110.0056
ARG 4120.0063
LYS 4130.0108
ARG 4140.0134
ALA 4150.0112
ILE 4160.0097
ALA 4170.0122
SER 4180.0114
TYR 4190.0086
LEU 4200.0133
LEU 4210.0166
GLY 4220.0110
GLY 4230.0081
ARG 4240.0067
GLY 4250.0057
GLY 4260.0058
LEU 4270.0054
THR 4280.0049
SER 4290.0057
THR 4300.0067
GLY 4310.0042
CYS 4320.0042
ASP 4330.0041
ARG 4340.0028
GLY 4350.0024
ALA 4360.0024
PHE 4370.0031
VAL 4380.0031
ARG 4390.0034
THR 4400.0033
ALA 4410.0041
GLY 4420.0043
GLN 4430.0100
ALA 4440.0064
LEU 4450.0039
PRO 4460.0032
ASP 4470.0031
LEU 4480.0031
GLN 4490.0021
VAL 4500.0021
ARG 4510.0023
PHE 4520.0028
VAL 4530.0032
PRO 4540.0038
GLY 4550.0039
MET 4560.0036
ALA 4570.0027
LEU 4580.0016
ASP 4590.0032
PRO 4600.0038
ASP 4610.0066
GLY 4620.0062
VAL 4630.0061
SER 4640.0038
THR 4650.0032
TYR 4660.0032
VAL 4670.0031
ARG 4680.0041
PHE 4690.0034
ALA 4700.0051
LYS 4710.0064
PHE 4720.0067
GLN 4730.0075
SER 4740.0103
GLN 4750.0109
GLY 4760.0074
LEU 4770.0063
LYS 4780.0049
TRP 4790.0039
PRO 4800.0048
SER 4810.0054
GLY 4820.0054
ILE 4830.0044
THR 4840.0034
MET 4850.0034
GLN 4860.0030
LEU 4870.0029
ILE 4880.0031
ALA 4890.0032
CYS 4900.0036
ARG 4910.0046
PRO 4920.0042
GLN 4930.0046
SER 4940.0066
THR 4950.0068
GLY 4960.0068
SER 4970.0080
VAL 4980.0078
GLY 4990.0096
LEU 5000.0113
LYS 5010.0122
SER 5020.0116
ALA 5030.0085
ASP 5040.0082
PRO 5050.0080
PHE 5060.0082
ALA 5070.0109
PRO 5080.0088
PRO 5090.0089
LYS 5100.0098
LEU 5110.0087
SER 5120.0081
PRO 5130.0082
GLY 5140.0087
TYR 5150.0066
LEU 5160.0053
THR 5170.0054
ASP 5180.0065
LYS 5190.0071
ASP 5200.0063
GLY 5210.0019
ALA 5220.0022
ASP 5230.0034
LEU 5240.0020
ALA 5250.0014
THR 5260.0027
LEU 5270.0034
ARG 5280.0027
LYS 5290.0031
GLY 5300.0031
ILE 5310.0033
HISE 5320.0032
TRP 5330.0033
ALA 5340.0035
ARG 5350.0036
ASP 5360.0044
VAL 5370.0044
ALA 5380.0048
ARG 5390.0054
SER 5400.0056
SER 5410.0061
ALA 5420.0045
LEU 5430.0049
SER 5440.0063
GLU 5450.0066
TYR 5460.0059
LEU 5470.0066
ASP 5480.0077
GLY 5490.0067
GLU 5500.0060
LEU 5510.0028
PHE 5520.0018
PRO 5530.0017
GLY 5540.0095
SER 5550.0249
GLY 5560.0220
VAL 5570.0013
VAL 5580.0078
SER 5590.0156
ASP 5600.0178
ASP 5610.0186
GLN 5620.0102
ILE 5630.0043
ASP 5640.0052
GLU 5650.0051
TYR 5660.0028
ILE 5670.0034
ARG 5680.0042
ARG 5690.0052
SER 5700.0053
ILE 5710.0065
HISD 5720.0064
SER 5730.0068
SER 5740.0066
ASN 5750.0056
ALA 5760.0051
ILE 5770.0052
THR 5780.0039
GLY 5790.0053
THR 5800.0062
CYS 5810.0062
LYS 5820.0057
MET 5830.0065
GLY 5840.0103
ASN 5850.0187
ALA 5860.0317
GLY 5870.0525
ASP 5880.0321
SER 5890.0161
SER 5900.0102
SER 5910.0081
VAL 5920.0089
VAL 5930.0088
ASP 5940.0085
ASN 5950.0062
GLN 5960.0037
LEU 5970.0051
ARG 5980.0076
VAL 5990.0096
HISE 6000.0090
GLY 6010.0095
VAL 6020.0082
GLU 6030.0112
GLY 6040.0109
LEU 6050.0060
ARG 6060.0054
VAL 6070.0055
VAL 6080.0013
ASP 6090.0015
ALA 6100.0020
SER 6110.0041
VAL 6120.0043
VAL 6130.0036
PRO 6140.0058
LYS 6150.0057
ILE 6160.0045
PRO 6170.0035
GLY 6180.0035
GLY 6190.0033
GLN 6200.0038
THR 6210.0039
GLY 6220.0057
ALA 6230.0056
PRO 6240.0053
VAL 6250.0052
VAL 6260.0060
MET 6270.0059
ILE 6280.0045
ALA 6290.0061
GLU 6300.0063
ARG 6310.0061
ALA 6320.0051
ALA 6330.0068
ALA 6340.0097
LEU 6350.0066
LEU 6360.0060
THR 6370.0121
GLY 6380.0391
LYS 6390.0382
ALA 6400.0182
THR 6410.0089
ILE 6420.0059
GLY 6430.0087
ALA 6440.0124
SER 6450.0141
ALA 6460.0131
ALA 6470.0137
ALA 6480.0074
PRO 6490.0067

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.