CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 45  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0930
SER 770.0188
PRO 780.0129
VAL 790.0115
ALA 800.0189
GLY 810.0214
GLN 820.0146
LYS 830.0132
TYR 840.0088
ASP 850.0122
TYR 860.0053
ILE 870.0051
LEU 880.0056
VAL 890.0050
GLY 900.0054
GLY 910.0049
GLY 920.0045
THR 930.0039
ALA 940.0037
ALA 950.0040
CYS 960.0043
VAL 970.0038
LEU 980.0052
ALA 990.0043
ASN 1000.0049
ARG 1010.0052
LEU 1020.0046
SER 1030.0040
ALA 1040.0061
ASP 1050.0102
GLY 1060.0125
SER 1070.0090
LYS 1080.0067
ARG 1090.0037
VAL 1100.0033
LEU 1110.0029
VAL 1120.0032
LEU 1130.0032
GLU 1140.0041
ALA 1150.0048
GLY 1160.0072
PRO 1170.0073
ASP 1180.0068
ASN 1190.0066
THR 1200.0080
SER 1210.0086
ARG 1220.0072
ASP 1230.0071
VAL 1240.0049
LYS 1250.0033
ILE 1260.0017
PRO 1270.0026
ALA 1280.0023
ALA 1290.0037
ILE 1300.0048
THR 1310.0058
ARG 1320.0066
LEU 1330.0069
PHE 1340.0057
ARG 1350.0060
SER 1360.0060
PRO 1370.0073
LEU 1380.0064
ASP 1390.0067
TRP 1400.0047
ASN 1410.0050
LEU 1420.0051
PHE 1430.0030
SER 1440.0025
GLU 1450.0023
LEU 1460.0046
GLN 1470.0054
GLU 1480.0073
GLN 1490.0065
LEU 1500.0045
ALA 1510.0045
GLU 1520.0061
ARG 1530.0037
GLN 1540.0025
ILE 1550.0032
TYR 1560.0034
MET 1570.0039
ALA 1580.0048
ARG 1590.0044
GLY 1600.0042
ARG 1610.0056
LEU 1620.0052
LEU 1630.0047
GLY 1640.0041
GLY 1650.0044
SER 1660.0039
SER 1670.0028
ALA 1680.0033
THR 1690.0040
ASN 1700.0028
ALA 1710.0028
THR 1720.0027
LEU 1730.0036
TYR 1740.0032
HISD 1750.0025
ARG 1760.0027
GLY 1770.0032
ALA 1780.0036
ALA 1790.0052
GLY 1800.0054
ASP 1810.0052
TYR 1820.0051
ASP 1830.0066
ALA 1840.0067
TRP 1850.0053
GLY 1860.0060
VAL 1870.0046
GLU 1880.0060
GLY 1890.0065
TRP 1900.0059
SER 1910.0069
SER 1920.0061
GLU 1930.0070
ASP 1940.0056
VAL 1950.0033
LEU 1960.0029
SER 1970.0043
TRP 1980.0043
PHE 1990.0039
VAL 2000.0041
GLN 2010.0049
ALA 2020.0054
GLU 2030.0065
THR 2040.0085
ASN 2050.0084
ALA 2060.0155
ASP 2070.0154
PHE 2080.0147
GLY 2090.0149
PRO 2100.0109
GLY 2110.0093
ALA 2120.0074
TYR 2130.0046
HISH 2140.0070
GLY 2150.0066
SER 2160.0073
GLY 2170.0093
GLY 2180.0038
PRO 2190.0030
MET 2200.0030
ARG 2210.0034
VAL 2220.0045
GLU 2230.0050
ASN 2240.0044
PRO 2250.0042
ARG 2260.0040
TYR 2270.0048
THR 2280.0042
ASN 2290.0030
LYS 2300.0060
GLN 2310.0044
LEU 2320.0017
HISE 2330.0017
THR 2340.0024
ALA 2350.0024
PHE 2360.0028
PHE 2370.0022
LYS 2380.0032
ALA 2390.0046
ALA 2400.0051
GLU 2410.0050
GLU 2420.0061
VAL 2430.0073
GLY 2440.0073
LEU 2450.0059
THR 2460.0046
PRO 2470.0034
ASN 2480.0019
SER 2490.0018
ASP 2500.0021
PHE 2510.0023
ASN 2520.0019
ASP 2530.0021
TRP 2540.0026
SER 2550.0042
HISE 2560.0040
ASP 2570.0043
HISE 2580.0049
ALA 2590.0056
GLY 2600.0048
TYR 2610.0042
GLY 2620.0036
THR 2630.0024
PHE 2640.0034
GLN 2650.0041
VAL 2660.0039
MET 2670.0033
GLN 2680.0030
ASP 2690.0025
LYS 2700.0031
GLY 2710.0022
THR 2720.0009
ARG 2730.0005
ALA 2740.0007
ASP 2750.0014
MET 2760.0023
TYR 2770.0033
ARG 2780.0025
GLN 2790.0021
TYR 2800.0034
LEU 2810.0043
LYS 2820.0047
PRO 2830.0044
VAL 2840.0053
LEU 2850.0051
GLY 2860.0079
ARG 2870.0151
ARG 2880.0200
ASN 2890.0080
LEU 2900.0014
GLN 2910.0015
VAL 2920.0013
LEU 2930.0020
THR 2940.0043
GLY 2950.0046
ALA 2960.0041
ALA 2970.0041
VAL 2980.0046
THR 2990.0043
LYS 3000.0039
VAL 3010.0051
ASN 3020.0049
ILE 3030.0052
ASP 3040.0051
GLN 3050.0115
ALA 3060.0289
ALA 3070.0527
GLY 3080.0436
LYS 3090.0204
ALA 3100.0087
GLN 3110.0074
ALA 3120.0050
LEU 3130.0069
GLY 3140.0060
VAL 3150.0052
GLU 3160.0044
PHE 3170.0046
SER 3180.0067
THR 3190.0084
ASP 3200.0221
GLY 3210.0164
PRO 3220.0137
THR 3230.0152
GLY 3240.0117
GLU 3250.0269
ARG 3260.0042
LEU 3270.0053
SER 3280.0048
ALA 3290.0082
GLU 3300.0104
LEU 3310.0107
ALA 3320.0207
PRO 3330.0376
GLY 3340.0389
GLY 3350.0110
GLU 3360.0092
VAL 3370.0067
ILE 3380.0066
MET 3390.0068
CYS 3400.0068
ALA 3410.0056
GLY 3420.0048
ALA 3430.0034
VAL 3440.0044
HISD 3450.0040
THR 3460.0037
PRO 3470.0029
PHE 3480.0040
LEU 3490.0039
LEU 3500.0046
LYS 3510.0023
HISE 3520.0037
SER 3530.0059
GLY 3540.0044
VAL 3550.0043
GLY 3560.0024
PRO 3570.0104
SER 3580.0133
ALA 3590.0228
GLU 3600.0185
LEU 3610.0091
LYS 3620.0161
GLU 3630.0190
PHE 3640.0127
GLY 3650.0050
ILE 3660.0033
PRO 3670.0120
VAL 3680.0076
VAL 3690.0103
SER 3700.0079
ASN 3710.0090
LEU 3720.0057
ALA 3730.0092
GLY 3740.0040
VAL 3750.0021
GLY 3760.0047
GLN 3770.0025
ASN 3780.0021
LEU 3790.0020
GLN 3800.0021
ASP 3810.0023
GLN 3820.0018
PRO 3830.0028
ALA 3840.0028
CYS 3850.0023
LEU 3860.0026
THR 3870.0025
ALA 3880.0024
ALA 3890.0027
PRO 3900.0029
VAL 3910.0025
LYS 3920.0067
GLU 3930.0075
LYS 3940.0063
TYR 3950.0028
ASP 3960.0042
GLY 3970.0049
ILE 3980.0015
ALA 3990.0021
ILE 4000.0028
SER 4010.0023
ASP 4020.0025
HISE 4030.0024
ILE 4040.0018
TYR 4050.0016
ASN 4060.0020
GLU 4070.0031
LYS 4080.0020
GLY 4090.0027
GLN 4100.0032
ILE 4110.0023
ARG 4120.0022
LYS 4130.0015
ARG 4140.0010
ALA 4150.0015
ILE 4160.0028
ALA 4170.0030
SER 4180.0032
TYR 4190.0030
LEU 4200.0049
LEU 4210.0054
GLY 4220.0044
GLY 4230.0041
ARG 4240.0034
GLY 4250.0026
GLY 4260.0026
LEU 4270.0026
THR 4280.0029
SER 4290.0033
THR 4300.0034
GLY 4310.0034
CYS 4320.0036
ASP 4330.0036
ARG 4340.0037
GLY 4350.0043
ALA 4360.0048
PHE 4370.0062
VAL 4380.0063
ARG 4390.0068
THR 4400.0072
ALA 4410.0085
GLY 4420.0091
GLN 4430.0148
ALA 4440.0113
LEU 4450.0078
PRO 4460.0069
ASP 4470.0060
LEU 4480.0056
GLN 4490.0050
VAL 4500.0047
ARG 4510.0044
PHE 4520.0029
VAL 4530.0030
PRO 4540.0022
GLY 4550.0016
MET 4560.0012
ALA 4570.0007
LEU 4580.0024
ASP 4590.0020
PRO 4600.0012
ASP 4610.0027
GLY 4620.0028
VAL 4630.0027
SER 4640.0031
THR 4650.0029
TYR 4660.0032
VAL 4670.0048
ARG 4680.0045
PHE 4690.0036
ALA 4700.0056
LYS 4710.0069
PHE 4720.0054
GLN 4730.0054
SER 4740.0093
GLN 4750.0101
GLY 4760.0053
LEU 4770.0052
LYS 4780.0045
TRP 4790.0018
PRO 4800.0029
SER 4810.0029
GLY 4820.0023
ILE 4830.0025
THR 4840.0029
MET 4850.0041
GLN 4860.0042
LEU 4870.0043
ILE 4880.0034
ALA 4890.0036
CYS 4900.0042
ARG 4910.0034
PRO 4920.0022
GLN 4930.0019
SER 4940.0050
THR 4950.0038
GLY 4960.0030
SER 4970.0025
VAL 4980.0029
GLY 4990.0049
LEU 5000.0103
LYS 5010.0137
SER 5020.0154
ALA 5030.0111
ASP 5040.0123
PRO 5050.0112
PHE 5060.0109
ALA 5070.0124
PRO 5080.0124
PRO 5090.0068
LYS 5100.0055
LEU 5110.0021
SER 5120.0028
PRO 5130.0042
GLY 5140.0056
TYR 5150.0050
LEU 5160.0048
THR 5170.0069
ASP 5180.0136
LYS 5190.0174
ASP 5200.0179
GLY 5210.0034
ALA 5220.0024
ASP 5230.0018
LEU 5240.0023
ALA 5250.0037
THR 5260.0043
LEU 5270.0032
ARG 5280.0035
LYS 5290.0047
GLY 5300.0043
ILE 5310.0038
HISE 5320.0040
TRP 5330.0059
ALA 5340.0049
ARG 5350.0044
ASP 5360.0059
VAL 5370.0052
ALA 5380.0043
ARG 5390.0045
SER 5400.0044
SER 5410.0040
ALA 5420.0038
LEU 5430.0034
SER 5440.0045
GLU 5450.0055
TYR 5460.0033
LEU 5470.0043
ASP 5480.0043
GLY 5490.0034
GLU 5500.0029
LEU 5510.0004
PHE 5520.0009
PRO 5530.0008
GLY 5540.0055
SER 5550.0174
GLY 5560.0157
VAL 5570.0022
VAL 5580.0062
SER 5590.0118
ASP 5600.0116
ASP 5610.0127
GLN 5620.0076
ILE 5630.0026
ASP 5640.0035
GLU 5650.0045
TYR 5660.0021
ILE 5670.0018
ARG 5680.0024
ARG 5690.0021
SER 5700.0018
ILE 5710.0026
HISD 5720.0026
SER 5730.0031
SER 5740.0027
ASN 5750.0023
ALA 5760.0019
ILE 5770.0021
THR 5780.0018
GLY 5790.0015
THR 5800.0011
CYS 5810.0026
LYS 5820.0014
MET 5830.0036
GLY 5840.0057
ASN 5850.0196
ALA 5860.0477
GLY 5870.0930
ASP 5880.0577
SER 5890.0308
SER 5900.0192
SER 5910.0085
VAL 5920.0057
VAL 5930.0082
ASP 5940.0081
ASN 5950.0078
GLN 5960.0059
LEU 5970.0067
ARG 5980.0083
VAL 5990.0110
HISE 6000.0105
GLY 6010.0109
VAL 6020.0076
GLU 6030.0049
GLY 6040.0035
LEU 6050.0070
ARG 6060.0068
VAL 6070.0071
VAL 6080.0049
ASP 6090.0047
ALA 6100.0039
SER 6110.0042
VAL 6120.0039
VAL 6130.0030
PRO 6140.0033
LYS 6150.0030
ILE 6160.0022
PRO 6170.0030
GLY 6180.0031
GLY 6190.0034
GLN 6200.0012
THR 6210.0011
GLY 6220.0015
ALA 6230.0009
PRO 6240.0006
VAL 6250.0013
VAL 6260.0017
MET 6270.0008
ILE 6280.0002
ALA 6290.0039
GLU 6300.0045
ARG 6310.0028
ALA 6320.0062
ALA 6330.0089
ALA 6340.0130
LEU 6350.0082
LEU 6360.0076
THR 6370.0165
GLY 6380.0746
LYS 6390.0712
ALA 6400.0342
THR 6410.0173
ILE 6420.0130
GLY 6430.0198
ALA 6440.0142
SER 6450.0164
ALA 6460.0151
ALA 6470.0147
ALA 6480.0086
PRO 6490.0140

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.