CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 46  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0354
SER 770.0072
PRO 780.0034
VAL 790.0020
ALA 800.0074
GLY 810.0123
GLN 820.0095
LYS 830.0074
TYR 840.0055
ASP 850.0070
TYR 860.0082
ILE 870.0081
LEU 880.0104
VAL 890.0090
GLY 900.0098
GLY 910.0100
GLY 920.0086
THR 930.0088
ALA 940.0103
ALA 950.0111
CYS 960.0108
VAL 970.0116
LEU 980.0135
ALA 990.0118
ASN 1000.0140
ARG 1010.0136
LEU 1020.0127
SER 1030.0116
ALA 1040.0212
ASP 1050.0200
GLY 1060.0204
SER 1070.0144
LYS 1080.0109
ARG 1090.0105
VAL 1100.0069
LEU 1110.0055
VAL 1120.0076
LEU 1130.0070
GLU 1140.0074
ALA 1150.0082
GLY 1160.0064
PRO 1170.0049
ASP 1180.0043
ASN 1190.0033
THR 1200.0089
SER 1210.0118
ARG 1220.0164
ASP 1230.0151
VAL 1240.0076
LYS 1250.0094
ILE 1260.0108
PRO 1270.0087
ALA 1280.0112
ALA 1290.0105
ILE 1300.0096
THR 1310.0076
ARG 1320.0069
LEU 1330.0081
PHE 1340.0067
ARG 1350.0063
SER 1360.0067
PRO 1370.0070
LEU 1380.0066
ASP 1390.0067
TRP 1400.0043
ASN 1410.0057
LEU 1420.0057
PHE 1430.0091
SER 1440.0086
GLU 1450.0088
LEU 1460.0129
GLN 1470.0084
GLU 1480.0093
GLN 1490.0042
LEU 1500.0017
ALA 1510.0029
GLU 1520.0086
ARG 1530.0079
GLN 1540.0102
ILE 1550.0067
TYR 1560.0071
MET 1570.0064
ALA 1580.0049
ARG 1590.0036
GLY 1600.0035
ARG 1610.0062
LEU 1620.0045
LEU 1630.0038
GLY 1640.0045
GLY 1650.0050
SER 1660.0058
SER 1670.0042
ALA 1680.0033
THR 1690.0067
ASN 1700.0059
ALA 1710.0058
THR 1720.0031
LEU 1730.0024
TYR 1740.0027
HISD 1750.0025
ARG 1760.0071
GLY 1770.0080
ALA 1780.0091
ALA 1790.0161
GLY 1800.0175
ASP 1810.0157
TYR 1820.0175
ASP 1830.0229
ALA 1840.0240
TRP 1850.0188
GLY 1860.0215
VAL 1870.0165
GLU 1880.0172
GLY 1890.0153
TRP 1900.0141
SER 1910.0207
SER 1920.0206
GLU 1930.0235
ASP 1940.0171
VAL 1950.0132
LEU 1960.0161
SER 1970.0148
TRP 1980.0103
PHE 1990.0083
VAL 2000.0077
GLN 2010.0080
ALA 2020.0045
GLU 2030.0053
THR 2040.0072
ASN 2050.0093
ALA 2060.0143
ASP 2070.0168
PHE 2080.0154
GLY 2090.0143
PRO 2100.0108
GLY 2110.0146
ALA 2120.0116
TYR 2130.0075
HISH 2140.0091
GLY 2150.0075
SER 2160.0068
GLY 2170.0055
GLY 2180.0004
PRO 2190.0023
MET 2200.0033
ARG 2210.0071
VAL 2220.0068
GLU 2230.0078
ASN 2240.0039
PRO 2250.0035
ARG 2260.0051
TYR 2270.0082
THR 2280.0083
ASN 2290.0076
LYS 2300.0233
GLN 2310.0184
LEU 2320.0093
HISE 2330.0090
THR 2340.0142
ALA 2350.0090
PHE 2360.0050
PHE 2370.0091
LYS 2380.0084
ALA 2390.0059
ALA 2400.0091
GLU 2410.0111
GLU 2420.0082
VAL 2430.0105
GLY 2440.0150
LEU 2450.0119
THR 2460.0118
PRO 2470.0092
ASN 2480.0052
SER 2490.0054
ASP 2500.0036
PHE 2510.0018
ASN 2520.0053
ASP 2530.0063
TRP 2540.0076
SER 2550.0078
HISE 2560.0044
ASP 2570.0054
HISE 2580.0033
ALA 2590.0052
GLY 2600.0087
TYR 2610.0068
GLY 2620.0050
THR 2630.0022
PHE 2640.0006
GLN 2650.0024
VAL 2660.0028
MET 2670.0040
GLN 2680.0059
ASP 2690.0089
LYS 2700.0117
GLY 2710.0095
THR 2720.0075
ARG 2730.0050
ALA 2740.0046
ASP 2750.0038
MET 2760.0063
TYR 2770.0051
ARG 2780.0060
GLN 2790.0061
TYR 2800.0098
LEU 2810.0107
LYS 2820.0090
PRO 2830.0128
VAL 2840.0175
LEU 2850.0115
GLY 2860.0153
ARG 2870.0251
ARG 2880.0299
ASN 2890.0176
LEU 2900.0071
GLN 2910.0042
VAL 2920.0035
LEU 2930.0052
THR 2940.0068
GLY 2950.0083
ALA 2960.0082
ALA 2970.0081
VAL 2980.0082
THR 2990.0079
LYS 3000.0082
VAL 3010.0089
ASN 3020.0099
ILE 3030.0088
ASP 3040.0085
GLN 3050.0135
ALA 3060.0111
ALA 3070.0189
GLY 3080.0130
LYS 3090.0064
ALA 3100.0071
GLN 3110.0048
ALA 3120.0067
LEU 3130.0068
GLY 3140.0076
VAL 3150.0084
GLU 3160.0089
PHE 3170.0087
SER 3180.0121
THR 3190.0151
ASP 3200.0272
GLY 3210.0277
PRO 3220.0249
THR 3230.0354
GLY 3240.0124
GLU 3250.0227
ARG 3260.0086
LEU 3270.0100
SER 3280.0093
ALA 3290.0055
GLU 3300.0040
LEU 3310.0024
ALA 3320.0083
PRO 3330.0160
GLY 3340.0092
GLY 3350.0066
GLU 3360.0079
VAL 3370.0092
ILE 3380.0090
MET 3390.0096
CYS 3400.0104
ALA 3410.0070
GLY 3420.0050
ALA 3430.0038
VAL 3440.0012
HISD 3450.0032
THR 3460.0062
PRO 3470.0059
PHE 3480.0053
LEU 3490.0067
LEU 3500.0075
LYS 3510.0070
HISE 3520.0066
SER 3530.0090
GLY 3540.0088
VAL 3550.0084
GLY 3560.0084
PRO 3570.0088
SER 3580.0085
ALA 3590.0138
GLU 3600.0122
LEU 3610.0084
LYS 3620.0106
GLU 3630.0157
PHE 3640.0127
GLY 3650.0118
ILE 3660.0095
PRO 3670.0098
VAL 3680.0106
VAL 3690.0107
SER 3700.0090
ASN 3710.0081
LEU 3720.0070
ALA 3730.0071
GLY 3740.0056
VAL 3750.0059
GLY 3760.0057
GLN 3770.0053
ASN 3780.0049
LEU 3790.0044
GLN 3800.0056
ASP 3810.0039
GLN 3820.0032
PRO 3830.0036
ALA 3840.0048
CYS 3850.0052
LEU 3860.0091
THR 3870.0092
ALA 3880.0086
ALA 3890.0059
PRO 3900.0071
VAL 3910.0057
LYS 3920.0191
GLU 3930.0194
LYS 3940.0256
TYR 3950.0096
ASP 3960.0164
GLY 3970.0166
ILE 3980.0042
ALA 3990.0035
ILE 4000.0048
SER 4010.0033
ASP 4020.0043
HISE 4030.0058
ILE 4040.0070
TYR 4050.0048
ASN 4060.0063
GLU 4070.0080
LYS 4080.0145
GLY 4090.0075
GLN 4100.0045
ILE 4110.0060
ARG 4120.0086
LYS 4130.0097
ARG 4140.0097
ALA 4150.0108
ILE 4160.0105
ALA 4170.0113
SER 4180.0123
TYR 4190.0121
LEU 4200.0142
LEU 4210.0135
GLY 4220.0127
GLY 4230.0108
ARG 4240.0098
GLY 4250.0082
GLY 4260.0094
LEU 4270.0094
THR 4280.0074
SER 4290.0073
THR 4300.0085
GLY 4310.0055
CYS 4320.0053
ASP 4330.0044
ARG 4340.0061
GLY 4350.0063
ALA 4360.0069
PHE 4370.0068
VAL 4380.0089
ARG 4390.0092
THR 4400.0110
ALA 4410.0110
GLY 4420.0110
GLN 4430.0148
ALA 4440.0110
LEU 4450.0054
PRO 4460.0066
ASP 4470.0064
LEU 4480.0063
GLN 4490.0058
VAL 4500.0071
ARG 4510.0066
PHE 4520.0063
VAL 4530.0060
PRO 4540.0046
GLY 4550.0050
MET 4560.0059
ALA 4570.0074
LEU 4580.0054
ASP 4590.0048
PRO 4600.0065
ASP 4610.0027
GLY 4620.0049
VAL 4630.0056
SER 4640.0054
THR 4650.0047
TYR 4660.0035
VAL 4670.0036
ARG 4680.0047
PHE 4690.0026
ALA 4700.0045
LYS 4710.0091
PHE 4720.0090
GLN 4730.0099
SER 4740.0158
GLN 4750.0197
GLY 4760.0154
LEU 4770.0131
LYS 4780.0092
TRP 4790.0043
PRO 4800.0041
SER 4810.0036
GLY 4820.0043
ILE 4830.0036
THR 4840.0056
MET 4850.0069
GLN 4860.0063
LEU 4870.0070
ILE 4880.0035
ALA 4890.0032
CYS 4900.0042
ARG 4910.0067
PRO 4920.0065
GLN 4930.0070
SER 4940.0070
THR 4950.0059
GLY 4960.0048
SER 4970.0021
VAL 4980.0021
GLY 4990.0026
LEU 5000.0047
LYS 5010.0051
SER 5020.0052
ALA 5030.0096
ASP 5040.0064
PRO 5050.0073
PHE 5060.0069
ALA 5070.0067
PRO 5080.0068
PRO 5090.0033
LYS 5100.0034
LEU 5110.0038
SER 5120.0056
PRO 5130.0052
GLY 5140.0047
TYR 5150.0037
LEU 5160.0021
THR 5170.0042
ASP 5180.0138
LYS 5190.0116
ASP 5200.0088
GLY 5210.0057
ALA 5220.0065
ASP 5230.0047
LEU 5240.0036
ALA 5250.0048
THR 5260.0073
LEU 5270.0070
ARG 5280.0070
LYS 5290.0093
GLY 5300.0101
ILE 5310.0103
HISE 5320.0097
TRP 5330.0109
ALA 5340.0112
ARG 5350.0102
ASP 5360.0091
VAL 5370.0073
ALA 5380.0067
ARG 5390.0047
SER 5400.0016
SER 5410.0058
ALA 5420.0091
LEU 5430.0049
SER 5440.0077
GLU 5450.0173
TYR 5460.0100
LEU 5470.0096
ASP 5480.0108
GLY 5490.0092
GLU 5500.0100
LEU 5510.0094
PHE 5520.0104
PRO 5530.0117
GLY 5540.0175
SER 5550.0242
GLY 5560.0181
VAL 5570.0122
VAL 5580.0112
SER 5590.0199
ASP 5600.0199
ASP 5610.0242
GLN 5620.0180
ILE 5630.0089
ASP 5640.0092
GLU 5650.0134
TYR 5660.0097
ILE 5670.0076
ARG 5680.0055
ARG 5690.0049
SER 5700.0063
ILE 5710.0049
HISD 5720.0021
SER 5730.0031
SER 5740.0037
ASN 5750.0025
ALA 5760.0024
ILE 5770.0024
THR 5780.0035
GLY 5790.0039
THR 5800.0044
CYS 5810.0069
LYS 5820.0058
MET 5830.0050
GLY 5840.0107
ASN 5850.0188
ALA 5860.0263
GLY 5870.0340
ASP 5880.0246
SER 5890.0187
SER 5900.0135
SER 5910.0077
VAL 5920.0049
VAL 5930.0034
ASP 5940.0022
ASN 5950.0041
GLN 5960.0049
LEU 5970.0045
ARG 5980.0054
VAL 5990.0051
HISE 6000.0039
GLY 6010.0051
VAL 6020.0058
GLU 6030.0047
GLY 6040.0077
LEU 6050.0082
ARG 6060.0079
VAL 6070.0081
VAL 6080.0069
ASP 6090.0064
ALA 6100.0048
SER 6110.0053
VAL 6120.0033
VAL 6130.0035
PRO 6140.0106
LYS 6150.0117
ILE 6160.0078
PRO 6170.0077
GLY 6180.0056
GLY 6190.0026
GLN 6200.0024
THR 6210.0024
GLY 6220.0013
ALA 6230.0009
PRO 6240.0019
VAL 6250.0038
VAL 6260.0048
MET 6270.0022
ILE 6280.0018
ALA 6290.0074
GLU 6300.0072
ARG 6310.0047
ALA 6320.0079
ALA 6330.0099
ALA 6340.0099
LEU 6350.0097
LEU 6360.0112
THR 6370.0119
GLY 6380.0209
LYS 6390.0180
ALA 6400.0131
THR 6410.0141
ILE 6420.0078
GLY 6430.0073
ALA 6440.0034
SER 6450.0040
ALA 6460.0040
ALA 6470.0052
ALA 6480.0048
PRO 6490.0097

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.