CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0715
SER 770.0055
PRO 780.0049
VAL 790.0031
ALA 800.0052
GLY 810.0050
GLN 820.0044
LYS 830.0035
TYR 840.0033
ASP 850.0035
TYR 860.0025
ILE 870.0023
LEU 880.0024
VAL 890.0021
GLY 900.0027
GLY 910.0031
GLY 920.0042
THR 930.0034
ALA 940.0021
ALA 950.0034
CYS 960.0035
VAL 970.0024
LEU 980.0022
ALA 990.0026
ASN 1000.0025
ARG 1010.0016
LEU 1020.0022
SER 1030.0021
ALA 1040.0036
ASP 1050.0057
GLY 1060.0064
SER 1070.0059
LYS 1080.0055
ARG 1090.0051
VAL 1100.0030
LEU 1110.0028
VAL 1120.0031
LEU 1130.0030
GLU 1140.0039
ALA 1150.0043
GLY 1160.0055
PRO 1170.0059
ASP 1180.0059
ASN 1190.0070
THR 1200.0069
SER 1210.0061
ARG 1220.0042
ASP 1230.0044
VAL 1240.0035
LYS 1250.0044
ILE 1260.0035
PRO 1270.0031
ALA 1280.0053
ALA 1290.0047
ILE 1300.0039
THR 1310.0068
ARG 1320.0076
LEU 1330.0019
PHE 1340.0023
ARG 1350.0028
SER 1360.0035
PRO 1370.0029
LEU 1380.0031
ASP 1390.0036
TRP 1400.0045
ASN 1410.0045
LEU 1420.0062
PHE 1430.0099
SER 1440.0114
GLU 1450.0149
LEU 1460.0248
GLN 1470.0164
GLU 1480.0227
GLN 1490.0052
LEU 1500.0037
ALA 1510.0075
GLU 1520.0228
ARG 1530.0181
GLN 1540.0148
ILE 1550.0055
TYR 1560.0040
MET 1570.0034
ALA 1580.0032
ARG 1590.0042
GLY 1600.0046
ARG 1610.0054
LEU 1620.0052
LEU 1630.0055
GLY 1640.0054
GLY 1650.0054
SER 1660.0053
SER 1670.0054
ALA 1680.0051
THR 1690.0047
ASN 1700.0047
ALA 1710.0045
THR 1720.0045
LEU 1730.0041
TYR 1740.0039
HISD 1750.0037
ARG 1760.0030
GLY 1770.0024
ALA 1780.0019
ALA 1790.0045
GLY 1800.0036
ASP 1810.0045
TYR 1820.0065
ASP 1830.0074
ALA 1840.0076
TRP 1850.0077
GLY 1860.0087
VAL 1870.0084
GLU 1880.0086
GLY 1890.0077
TRP 1900.0076
SER 1910.0084
SER 1920.0073
GLU 1930.0078
ASP 1940.0072
VAL 1950.0061
LEU 1960.0057
SER 1970.0049
TRP 1980.0038
PHE 1990.0031
VAL 2000.0039
GLN 2010.0039
ALA 2020.0034
GLU 2030.0049
THR 2040.0041
ASN 2050.0052
ALA 2060.0076
ASP 2070.0094
PHE 2080.0100
GLY 2090.0083
PRO 2100.0079
GLY 2110.0104
ALA 2120.0094
TYR 2130.0082
HISH 2140.0071
GLY 2150.0048
SER 2160.0042
GLY 2170.0036
GLY 2180.0042
PRO 2190.0045
MET 2200.0042
ARG 2210.0059
VAL 2220.0052
GLU 2230.0050
ASN 2240.0053
PRO 2250.0035
ARG 2260.0030
TYR 2270.0020
THR 2280.0015
ASN 2290.0012
LYS 2300.0067
GLN 2310.0062
LEU 2320.0037
HISE 2330.0046
THR 2340.0062
ALA 2350.0059
PHE 2360.0050
PHE 2370.0061
LYS 2380.0080
ALA 2390.0071
ALA 2400.0058
GLU 2410.0084
GLU 2420.0099
VAL 2430.0085
GLY 2440.0080
LEU 2450.0065
THR 2460.0057
PRO 2470.0059
ASN 2480.0052
SER 2490.0054
ASP 2500.0060
PHE 2510.0047
ASN 2520.0048
ASP 2530.0054
TRP 2540.0036
SER 2550.0069
HISE 2560.0086
ASP 2570.0074
HISE 2580.0054
ALA 2590.0058
GLY 2600.0049
TYR 2610.0047
GLY 2620.0058
THR 2630.0042
PHE 2640.0045
GLN 2650.0054
VAL 2660.0045
MET 2670.0048
GLN 2680.0048
ASP 2690.0059
LYS 2700.0061
GLY 2710.0040
THR 2720.0054
ARG 2730.0051
ALA 2740.0050
ASP 2750.0052
MET 2760.0047
TYR 2770.0061
ARG 2780.0073
GLN 2790.0059
TYR 2800.0052
LEU 2810.0050
LYS 2820.0079
PRO 2830.0085
VAL 2840.0047
LEU 2850.0054
GLY 2860.0059
ARG 2870.0043
ARG 2880.0076
ASN 2890.0058
LEU 2900.0029
GLN 2910.0029
VAL 2920.0036
LEU 2930.0036
THR 2940.0040
GLY 2950.0040
ALA 2960.0032
ALA 2970.0029
VAL 2980.0022
THR 2990.0012
LYS 3000.0007
VAL 3010.0013
ASN 3020.0032
ILE 3030.0032
ASP 3040.0035
GLN 3050.0071
ALA 3060.0071
ALA 3070.0092
GLY 3080.0057
LYS 3090.0032
ALA 3100.0033
GLN 3110.0022
ALA 3120.0022
LEU 3130.0028
GLY 3140.0014
VAL 3150.0010
GLU 3160.0011
PHE 3170.0022
SER 3180.0039
THR 3190.0054
ASP 3200.0116
GLY 3210.0111
PRO 3220.0088
THR 3230.0085
GLY 3240.0078
GLU 3250.0084
ARG 3260.0020
LEU 3270.0028
SER 3280.0022
ALA 3290.0017
GLU 3300.0019
LEU 3310.0018
ALA 3320.0036
PRO 3330.0039
GLY 3340.0036
GLY 3350.0023
GLU 3360.0021
VAL 3370.0020
ILE 3380.0019
MET 3390.0015
CYS 3400.0015
ALA 3410.0010
GLY 3420.0009
ALA 3430.0014
VAL 3440.0030
HISD 3450.0023
THR 3460.0022
PRO 3470.0026
PHE 3480.0024
LEU 3490.0023
LEU 3500.0028
LYS 3510.0028
HISE 3520.0030
SER 3530.0037
GLY 3540.0036
VAL 3550.0036
GLY 3560.0041
PRO 3570.0035
SER 3580.0048
ALA 3590.0047
GLU 3600.0033
LEU 3610.0047
LYS 3620.0067
GLU 3630.0050
PHE 3640.0044
GLY 3650.0070
ILE 3660.0070
PRO 3670.0085
VAL 3680.0057
VAL 3690.0048
SER 3700.0036
ASN 3710.0045
LEU 3720.0044
ALA 3730.0045
GLY 3740.0048
VAL 3750.0035
GLY 3760.0023
GLN 3770.0038
ASN 3780.0053
LEU 3790.0052
GLN 3800.0048
ASP 3810.0034
GLN 3820.0028
PRO 3830.0021
ALA 3840.0023
CYS 3850.0042
LEU 3860.0040
THR 3870.0025
ALA 3880.0021
ALA 3890.0014
PRO 3900.0017
VAL 3910.0021
LYS 3920.0068
GLU 3930.0108
LYS 3940.0091
TYR 3950.0017
ASP 3960.0021
GLY 3970.0032
ILE 3980.0021
ALA 3990.0022
ILE 4000.0028
SER 4010.0048
ASP 4020.0066
HISE 4030.0068
ILE 4040.0114
TYR 4050.0114
ASN 4060.0149
GLU 4070.0171
LYS 4080.0140
GLY 4090.0100
GLN 4100.0129
ILE 4110.0146
ARG 4120.0161
LYS 4130.0056
ARG 4140.0150
ALA 4150.0181
ILE 4160.0087
ALA 4170.0058
SER 4180.0082
TYR 4190.0054
LEU 4200.0073
LEU 4210.0057
GLY 4220.0010
GLY 4230.0028
ARG 4240.0016
GLY 4250.0053
GLY 4260.0065
LEU 4270.0056
THR 4280.0016
SER 4290.0022
THR 4300.0031
GLY 4310.0024
CYS 4320.0027
ASP 4330.0033
ARG 4340.0032
GLY 4350.0035
ALA 4360.0042
PHE 4370.0046
VAL 4380.0059
ARG 4390.0071
THR 4400.0086
ALA 4410.0087
GLY 4420.0089
GLN 4430.0133
ALA 4440.0096
LEU 4450.0045
PRO 4460.0047
ASP 4470.0044
LEU 4480.0043
GLN 4490.0034
VAL 4500.0035
ARG 4510.0033
PHE 4520.0019
VAL 4530.0021
PRO 4540.0018
GLY 4550.0031
MET 4560.0031
ALA 4570.0032
LEU 4580.0052
ASP 4590.0046
PRO 4600.0038
ASP 4610.0024
GLY 4620.0029
VAL 4630.0021
SER 4640.0035
THR 4650.0040
TYR 4660.0058
VAL 4670.0099
ARG 4680.0088
PHE 4690.0089
ALA 4700.0180
LYS 4710.0208
PHE 4720.0166
GLN 4730.0207
SER 4740.0349
GLN 4750.0339
GLY 4760.0182
LEU 4770.0162
LYS 4780.0135
TRP 4790.0073
PRO 4800.0074
SER 4810.0054
GLY 4820.0019
ILE 4830.0017
THR 4840.0020
MET 4850.0026
GLN 4860.0031
LEU 4870.0037
ILE 4880.0024
ALA 4890.0018
CYS 4900.0017
ARG 4910.0082
PRO 4920.0113
GLN 4930.0192
SER 4940.0130
THR 4950.0111
GLY 4960.0086
SER 4970.0057
VAL 4980.0056
GLY 4990.0056
LEU 5000.0052
LYS 5010.0046
SER 5020.0031
ALA 5030.0038
ASP 5040.0021
PRO 5050.0020
PHE 5060.0034
ALA 5070.0042
PRO 5080.0060
PRO 5090.0063
LYS 5100.0087
LEU 5110.0089
SER 5120.0109
PRO 5130.0083
GLY 5140.0067
TYR 5150.0058
LEU 5160.0096
THR 5170.0132
ASP 5180.0550
LYS 5190.0600
ASP 5200.0715
GLY 5210.0401
ALA 5220.0305
ASP 5230.0137
LEU 5240.0106
ALA 5250.0074
THR 5260.0023
LEU 5270.0062
ARG 5280.0106
LYS 5290.0110
GLY 5300.0062
ILE 5310.0061
HISE 5320.0083
TRP 5330.0036
ALA 5340.0032
ARG 5350.0033
ASP 5360.0037
VAL 5370.0030
ALA 5380.0032
ARG 5390.0049
SER 5400.0065
SER 5410.0078
ALA 5420.0075
LEU 5430.0050
SER 5440.0050
GLU 5450.0056
TYR 5460.0042
LEU 5470.0035
ASP 5480.0045
GLY 5490.0048
GLU 5500.0059
LEU 5510.0022
PHE 5520.0017
PRO 5530.0004
GLY 5540.0240
SER 5550.0541
GLY 5560.0558
VAL 5570.0222
VAL 5580.0219
SER 5590.0291
ASP 5600.0294
ASP 5610.0403
GLN 5620.0267
ILE 5630.0079
ASP 5640.0110
GLU 5650.0067
TYR 5660.0103
ILE 5670.0086
ARG 5680.0115
ARG 5690.0046
SER 5700.0050
ILE 5710.0045
HISD 5720.0024
SER 5730.0020
SER 5740.0021
ASN 5750.0022
ALA 5760.0030
ILE 5770.0031
THR 5780.0031
GLY 5790.0032
THR 5800.0028
CYS 5810.0041
LYS 5820.0046
MET 5830.0039
GLY 5840.0073
ASN 5850.0083
ALA 5860.0089
GLY 5870.0155
ASP 5880.0116
SER 5890.0095
SER 5900.0071
SER 5910.0059
VAL 5920.0044
VAL 5930.0048
ASP 5940.0048
ASN 5950.0051
GLN 5960.0043
LEU 5970.0043
ARG 5980.0043
VAL 5990.0031
HISE 6000.0029
GLY 6010.0020
VAL 6020.0014
GLU 6030.0013
GLY 6040.0022
LEU 6050.0022
ARG 6060.0023
VAL 6070.0024
VAL 6080.0017
ASP 6090.0013
ALA 6100.0008
SER 6110.0025
VAL 6120.0026
VAL 6130.0034
PRO 6140.0065
LYS 6150.0061
ILE 6160.0051
PRO 6170.0029
GLY 6180.0019
GLY 6190.0018
GLN 6200.0023
THR 6210.0020
GLY 6220.0019
ALA 6230.0021
PRO 6240.0026
VAL 6250.0026
VAL 6260.0020
MET 6270.0026
ILE 6280.0033
ALA 6290.0030
GLU 6300.0021
ARG 6310.0035
ALA 6320.0036
ALA 6330.0028
ALA 6340.0030
LEU 6350.0041
LEU 6360.0035
THR 6370.0029
GLY 6380.0048
LYS 6390.0045
ALA 6400.0052
THR 6410.0060
ILE 6420.0065
GLY 6430.0070
ALA 6440.0043
SER 6450.0017
ALA 6460.0029
ALA 6470.0027
ALA 6480.0038
PRO 6490.0035

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.