CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0586
SER 770.0454
PRO 780.0334
VAL 790.0203
ALA 800.0317
GLY 810.0278
GLN 820.0157
LYS 830.0040
TYR 840.0041
ASP 850.0115
TYR 860.0059
ILE 870.0064
LEU 880.0087
VAL 890.0067
GLY 900.0069
GLY 910.0078
GLY 920.0049
THR 930.0049
ALA 940.0055
ALA 950.0065
CYS 960.0053
VAL 970.0059
LEU 980.0072
ALA 990.0067
ASN 1000.0074
ARG 1010.0069
LEU 1020.0071
SER 1030.0067
ALA 1040.0117
ASP 1050.0125
GLY 1060.0147
SER 1070.0111
LYS 1080.0087
ARG 1090.0098
VAL 1100.0088
LEU 1110.0089
VAL 1120.0105
LEU 1130.0089
GLU 1140.0079
ALA 1150.0065
GLY 1160.0067
PRO 1170.0066
ASP 1180.0057
ASN 1190.0049
THR 1200.0074
SER 1210.0089
ARG 1220.0097
ASP 1230.0089
VAL 1240.0060
LYS 1250.0069
ILE 1260.0085
PRO 1270.0092
ALA 1280.0102
ALA 1290.0091
ILE 1300.0081
THR 1310.0077
ARG 1320.0076
LEU 1330.0074
PHE 1340.0070
ARG 1350.0071
SER 1360.0088
PRO 1370.0093
LEU 1380.0057
ASP 1390.0048
TRP 1400.0063
ASN 1410.0077
LEU 1420.0078
PHE 1430.0104
SER 1440.0101
GLU 1450.0105
LEU 1460.0149
GLN 1470.0093
GLU 1480.0149
GLN 1490.0076
LEU 1500.0063
ALA 1510.0089
GLU 1520.0146
ARG 1530.0109
GLN 1540.0109
ILE 1550.0053
TYR 1560.0062
MET 1570.0061
ALA 1580.0056
ARG 1590.0044
GLY 1600.0037
ARG 1610.0044
LEU 1620.0049
LEU 1630.0063
GLY 1640.0050
GLY 1650.0042
SER 1660.0043
SER 1670.0043
ALA 1680.0026
THR 1690.0035
ASN 1700.0050
ALA 1710.0056
THR 1720.0050
LEU 1730.0036
TYR 1740.0032
HISD 1750.0039
ARG 1760.0031
GLY 1770.0036
ALA 1780.0053
ALA 1790.0090
GLY 1800.0085
ASP 1810.0051
TYR 1820.0068
ASP 1830.0112
ALA 1840.0105
TRP 1850.0098
GLY 1860.0134
VAL 1870.0120
GLU 1880.0145
GLY 1890.0103
TRP 1900.0084
SER 1910.0116
SER 1920.0100
GLU 1930.0124
ASP 1940.0077
VAL 1950.0053
LEU 1960.0067
SER 1970.0025
TRP 1980.0020
PHE 1990.0023
VAL 2000.0025
GLN 2010.0024
ALA 2020.0013
GLU 2030.0027
THR 2040.0054
ASN 2050.0053
ALA 2060.0089
ASP 2070.0054
PHE 2080.0083
GLY 2090.0137
PRO 2100.0163
GLY 2110.0183
ALA 2120.0149
TYR 2130.0099
HISH 2140.0059
GLY 2150.0059
SER 2160.0081
GLY 2170.0080
GLY 2180.0040
PRO 2190.0031
MET 2200.0024
ARG 2210.0047
VAL 2220.0041
GLU 2230.0044
ASN 2240.0018
PRO 2250.0023
ARG 2260.0029
TYR 2270.0047
THR 2280.0042
ASN 2290.0040
LYS 2300.0056
GLN 2310.0037
LEU 2320.0021
HISE 2330.0021
THR 2340.0027
ALA 2350.0026
PHE 2360.0030
PHE 2370.0049
LYS 2380.0056
ALA 2390.0046
ALA 2400.0046
GLU 2410.0075
GLU 2420.0078
VAL 2430.0068
GLY 2440.0082
LEU 2450.0060
THR 2460.0093
PRO 2470.0110
ASN 2480.0127
SER 2490.0142
ASP 2500.0099
PHE 2510.0066
ASN 2520.0051
ASP 2530.0080
TRP 2540.0107
SER 2550.0132
HISE 2560.0143
ASP 2570.0097
HISE 2580.0073
ALA 2590.0066
GLY 2600.0060
TYR 2610.0069
GLY 2620.0097
THR 2630.0055
PHE 2640.0046
GLN 2650.0036
VAL 2660.0041
MET 2670.0036
GLN 2680.0043
ASP 2690.0065
LYS 2700.0092
GLY 2710.0053
THR 2720.0066
ARG 2730.0052
ALA 2740.0043
ASP 2750.0021
MET 2760.0028
TYR 2770.0021
ARG 2780.0024
GLN 2790.0011
TYR 2800.0021
LEU 2810.0057
LYS 2820.0037
PRO 2830.0027
VAL 2840.0035
LEU 2850.0038
GLY 2860.0081
ARG 2870.0225
ARG 2880.0318
ASN 2890.0162
LEU 2900.0104
GLN 2910.0101
VAL 2920.0114
LEU 2930.0112
THR 2940.0087
GLY 2950.0053
ALA 2960.0071
ALA 2970.0057
VAL 2980.0064
THR 2990.0068
LYS 3000.0060
VAL 3010.0059
ASN 3020.0062
ILE 3030.0043
ASP 3040.0058
GLN 3050.0075
ALA 3060.0086
ALA 3070.0115
GLY 3080.0090
LYS 3090.0063
ALA 3100.0052
GLN 3110.0038
ALA 3120.0028
LEU 3130.0041
GLY 3140.0072
VAL 3150.0072
GLU 3160.0076
PHE 3170.0098
SER 3180.0093
THR 3190.0102
ASP 3200.0381
GLY 3210.0336
PRO 3220.0300
THR 3230.0278
GLY 3240.0205
GLU 3250.0448
ARG 3260.0121
LEU 3270.0112
SER 3280.0143
ALA 3290.0103
GLU 3300.0072
LEU 3310.0026
ALA 3320.0184
PRO 3330.0586
GLY 3340.0561
GLY 3350.0067
GLU 3360.0035
VAL 3370.0038
ILE 3380.0039
MET 3390.0045
CYS 3400.0052
ALA 3410.0029
GLY 3420.0040
ALA 3430.0049
VAL 3440.0047
HISD 3450.0041
THR 3460.0039
PRO 3470.0045
PHE 3480.0026
LEU 3490.0031
LEU 3500.0032
LYS 3510.0015
HISE 3520.0010
SER 3530.0025
GLY 3540.0024
VAL 3550.0032
GLY 3560.0027
PRO 3570.0035
SER 3580.0078
ALA 3590.0104
GLU 3600.0078
LEU 3610.0074
LYS 3620.0137
GLU 3630.0150
PHE 3640.0138
GLY 3650.0118
ILE 3660.0084
PRO 3670.0093
VAL 3680.0052
VAL 3690.0049
SER 3700.0055
ASN 3710.0052
LEU 3720.0056
ALA 3730.0062
GLY 3740.0070
VAL 3750.0065
GLY 3760.0065
GLN 3770.0062
ASN 3780.0060
LEU 3790.0060
GLN 3800.0054
ASP 3810.0054
GLN 3820.0051
PRO 3830.0046
ALA 3840.0044
CYS 3850.0039
LEU 3860.0020
THR 3870.0015
ALA 3880.0015
ALA 3890.0022
PRO 3900.0019
VAL 3910.0023
LYS 3920.0071
GLU 3930.0137
LYS 3940.0133
TYR 3950.0054
ASP 3960.0079
GLY 3970.0093
ILE 3980.0037
ALA 3990.0038
ILE 4000.0052
SER 4010.0058
ASP 4020.0051
HISE 4030.0070
ILE 4040.0110
TYR 4050.0068
ASN 4060.0104
GLU 4070.0194
LYS 4080.0287
GLY 4090.0047
GLN 4100.0088
ILE 4110.0135
ARG 4120.0154
LYS 4130.0235
ARG 4140.0173
ALA 4150.0103
ILE 4160.0155
ALA 4170.0179
SER 4180.0124
TYR 4190.0107
LEU 4200.0213
LEU 4210.0257
GLY 4220.0145
GLY 4230.0057
ARG 4240.0022
GLY 4250.0069
GLY 4260.0109
LEU 4270.0112
THR 4280.0067
SER 4290.0069
THR 4300.0070
GLY 4310.0045
CYS 4320.0044
ASP 4330.0047
ARG 4340.0045
GLY 4350.0052
ALA 4360.0060
PHE 4370.0044
VAL 4380.0038
ARG 4390.0047
THR 4400.0084
ALA 4410.0104
GLY 4420.0107
GLN 4430.0156
ALA 4440.0102
LEU 4450.0052
PRO 4460.0041
ASP 4470.0042
LEU 4480.0037
GLN 4490.0044
VAL 4500.0043
ARG 4510.0046
PHE 4520.0029
VAL 4530.0027
PRO 4540.0019
GLY 4550.0026
MET 4560.0033
ALA 4570.0040
LEU 4580.0053
ASP 4590.0044
PRO 4600.0024
ASP 4610.0033
GLY 4620.0039
VAL 4630.0029
SER 4640.0053
THR 4650.0051
TYR 4660.0051
VAL 4670.0074
ARG 4680.0073
PHE 4690.0071
ALA 4700.0086
LYS 4710.0091
PHE 4720.0091
GLN 4730.0056
SER 4740.0055
GLN 4750.0117
GLY 4760.0139
LEU 4770.0175
LYS 4780.0176
TRP 4790.0084
PRO 4800.0092
SER 4810.0057
GLY 4820.0017
ILE 4830.0011
THR 4840.0016
MET 4850.0028
GLN 4860.0032
LEU 4870.0032
ILE 4880.0046
ALA 4890.0045
CYS 4900.0041
ARG 4910.0043
PRO 4920.0053
GLN 4930.0050
SER 4940.0077
THR 4950.0061
GLY 4960.0055
SER 4970.0059
VAL 4980.0057
GLY 4990.0052
LEU 5000.0066
LYS 5010.0098
SER 5020.0085
ALA 5030.0103
ASP 5040.0074
PRO 5050.0044
PHE 5060.0031
ALA 5070.0049
PRO 5080.0085
PRO 5090.0073
LYS 5100.0073
LEU 5110.0080
SER 5120.0060
PRO 5130.0050
GLY 5140.0046
TYR 5150.0057
LEU 5160.0054
THR 5170.0065
ASP 5180.0142
LYS 5190.0186
ASP 5200.0215
GLY 5210.0045
ALA 5220.0046
ASP 5230.0045
LEU 5240.0020
ALA 5250.0030
THR 5260.0043
LEU 5270.0035
ARG 5280.0028
LYS 5290.0050
GLY 5300.0036
ILE 5310.0031
HISE 5320.0038
TRP 5330.0032
ALA 5340.0026
ARG 5350.0031
ASP 5360.0042
VAL 5370.0032
ALA 5380.0020
ARG 5390.0039
SER 5400.0048
SER 5410.0045
ALA 5420.0045
LEU 5430.0030
SER 5440.0036
GLU 5450.0041
TYR 5460.0029
LEU 5470.0027
ASP 5480.0026
GLY 5490.0037
GLU 5500.0034
LEU 5510.0036
PHE 5520.0017
PRO 5530.0024
GLY 5540.0053
SER 5550.0044
GLY 5560.0050
VAL 5570.0042
VAL 5580.0052
SER 5590.0042
ASP 5600.0048
ASP 5610.0029
GLN 5620.0019
ILE 5630.0017
ASP 5640.0016
GLU 5650.0019
TYR 5660.0023
ILE 5670.0030
ARG 5680.0030
ARG 5690.0031
SER 5700.0032
ILE 5710.0036
HISD 5720.0028
SER 5730.0030
SER 5740.0037
ASN 5750.0042
ALA 5760.0041
ILE 5770.0044
THR 5780.0053
GLY 5790.0054
THR 5800.0061
CYS 5810.0070
LYS 5820.0055
MET 5830.0059
GLY 5840.0100
ASN 5850.0199
ALA 5860.0301
GLY 5870.0298
ASP 5880.0151
SER 5890.0133
SER 5900.0064
SER 5910.0057
VAL 5920.0069
VAL 5930.0070
ASP 5940.0078
ASN 5950.0069
GLN 5960.0041
LEU 5970.0034
ARG 5980.0044
VAL 5990.0047
HISE 6000.0054
GLY 6010.0047
VAL 6020.0028
GLU 6030.0022
GLY 6040.0007
LEU 6050.0023
ARG 6060.0027
VAL 6070.0032
VAL 6080.0038
ASP 6090.0039
ALA 6100.0043
SER 6110.0052
VAL 6120.0046
VAL 6130.0038
PRO 6140.0058
LYS 6150.0039
ILE 6160.0027
PRO 6170.0014
GLY 6180.0026
GLY 6190.0041
GLN 6200.0038
THR 6210.0037
GLY 6220.0042
ALA 6230.0037
PRO 6240.0030
VAL 6250.0034
VAL 6260.0033
MET 6270.0021
ILE 6280.0016
ALA 6290.0036
GLU 6300.0032
ARG 6310.0023
ALA 6320.0038
ALA 6330.0045
ALA 6340.0040
LEU 6350.0041
LEU 6360.0050
THR 6370.0052
GLY 6380.0109
LYS 6390.0077
ALA 6400.0060
THR 6410.0047
ILE 6420.0060
GLY 6430.0070
ALA 6440.0040
SER 6450.0023
ALA 6460.0042
ALA 6470.0034
ALA 6480.0023
PRO 6490.0051

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.