CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 57  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0536
SER 770.0190
PRO 780.0155
VAL 790.0088
ALA 800.0112
GLY 810.0180
GLN 820.0155
LYS 830.0117
TYR 840.0061
ASP 850.0053
TYR 860.0028
ILE 870.0036
LEU 880.0045
VAL 890.0044
GLY 900.0051
GLY 910.0060
GLY 920.0047
THR 930.0042
ALA 940.0049
ALA 950.0046
CYS 960.0052
VAL 970.0053
LEU 980.0039
ALA 990.0050
ASN 1000.0055
ARG 1010.0040
LEU 1020.0046
SER 1030.0050
ALA 1040.0047
ASP 1050.0058
GLY 1060.0063
SER 1070.0070
LYS 1080.0037
ARG 1090.0068
VAL 1100.0046
LEU 1110.0053
VAL 1120.0054
LEU 1130.0076
GLU 1140.0067
ALA 1150.0061
GLY 1160.0099
PRO 1170.0089
ASP 1180.0072
ASN 1190.0067
THR 1200.0080
SER 1210.0131
ARG 1220.0157
ASP 1230.0147
VAL 1240.0075
LYS 1250.0088
ILE 1260.0101
PRO 1270.0094
ALA 1280.0087
ALA 1290.0084
ILE 1300.0060
THR 1310.0068
ARG 1320.0082
LEU 1330.0079
PHE 1340.0088
ARG 1350.0103
SER 1360.0129
PRO 1370.0173
LEU 1380.0123
ASP 1390.0117
TRP 1400.0107
ASN 1410.0108
LEU 1420.0109
PHE 1430.0122
SER 1440.0103
GLU 1450.0103
LEU 1460.0175
GLN 1470.0139
GLU 1480.0245
GLN 1490.0153
LEU 1500.0124
ALA 1510.0159
GLU 1520.0241
ARG 1530.0173
GLN 1540.0139
ILE 1550.0077
TYR 1560.0085
MET 1570.0079
ALA 1580.0074
ARG 1590.0080
GLY 1600.0084
ARG 1610.0106
LEU 1620.0080
LEU 1630.0061
GLY 1640.0039
GLY 1650.0056
SER 1660.0049
SER 1670.0039
ALA 1680.0038
THR 1690.0050
ASN 1700.0054
ALA 1710.0076
THR 1720.0076
LEU 1730.0057
TYR 1740.0052
HISD 1750.0049
ARG 1760.0047
GLY 1770.0064
ALA 1780.0076
ALA 1790.0091
GLY 1800.0099
ASP 1810.0094
TYR 1820.0080
ASP 1830.0083
ALA 1840.0094
TRP 1850.0074
GLY 1860.0077
VAL 1870.0079
GLU 1880.0132
GLY 1890.0123
TRP 1900.0096
SER 1910.0076
SER 1920.0106
GLU 1930.0131
ASP 1940.0088
VAL 1950.0076
LEU 1960.0105
SER 1970.0058
TRP 1980.0039
PHE 1990.0050
VAL 2000.0040
GLN 2010.0041
ALA 2020.0043
GLU 2030.0068
THR 2040.0113
ASN 2050.0123
ALA 2060.0246
ASP 2070.0304
PHE 2080.0213
GLY 2090.0119
PRO 2100.0139
GLY 2110.0303
ALA 2120.0301
TYR 2130.0194
HISH 2140.0158
GLY 2150.0036
SER 2160.0084
GLY 2170.0109
GLY 2180.0105
PRO 2190.0124
MET 2200.0117
ARG 2210.0136
VAL 2220.0131
GLU 2230.0144
ASN 2240.0123
PRO 2250.0113
ARG 2260.0130
TYR 2270.0065
THR 2280.0030
ASN 2290.0024
LYS 2300.0256
GLN 2310.0156
LEU 2320.0078
HISE 2330.0051
THR 2340.0060
ALA 2350.0051
PHE 2360.0072
PHE 2370.0045
LYS 2380.0034
ALA 2390.0065
ALA 2400.0039
GLU 2410.0041
GLU 2420.0049
VAL 2430.0066
GLY 2440.0093
LEU 2450.0168
THR 2460.0241
PRO 2470.0260
ASN 2480.0289
SER 2490.0284
ASP 2500.0168
PHE 2510.0097
ASN 2520.0084
ASP 2530.0135
TRP 2540.0151
SER 2550.0215
HISE 2560.0308
ASP 2570.0261
HISE 2580.0177
ALA 2590.0148
GLY 2600.0126
TYR 2610.0108
GLY 2620.0158
THR 2630.0126
PHE 2640.0094
GLN 2650.0082
VAL 2660.0112
MET 2670.0097
GLN 2680.0106
ASP 2690.0155
LYS 2700.0165
GLY 2710.0145
THR 2720.0109
ARG 2730.0090
ALA 2740.0103
ASP 2750.0076
MET 2760.0071
TYR 2770.0067
ARG 2780.0094
GLN 2790.0106
TYR 2800.0093
LEU 2810.0073
LYS 2820.0105
PRO 2830.0138
VAL 2840.0094
LEU 2850.0099
GLY 2860.0121
ARG 2870.0113
ARG 2880.0136
ASN 2890.0037
LEU 2900.0050
GLN 2910.0056
VAL 2920.0049
LEU 2930.0079
THR 2940.0074
GLY 2950.0074
ALA 2960.0079
ALA 2970.0073
VAL 2980.0061
THR 2990.0061
LYS 3000.0058
VAL 3010.0056
ASN 3020.0049
ILE 3030.0047
ASP 3040.0036
GLN 3050.0053
ALA 3060.0127
ALA 3070.0222
GLY 3080.0150
LYS 3090.0114
ALA 3100.0073
GLN 3110.0056
ALA 3120.0059
LEU 3130.0058
GLY 3140.0042
VAL 3150.0061
GLU 3160.0071
PHE 3170.0069
SER 3180.0057
THR 3190.0074
ASP 3200.0209
GLY 3210.0196
PRO 3220.0168
THR 3230.0302
GLY 3240.0247
GLU 3250.0199
ARG 3260.0068
LEU 3270.0088
SER 3280.0103
ALA 3290.0042
GLU 3300.0046
LEU 3310.0059
ALA 3320.0185
PRO 3330.0536
GLY 3340.0408
GLY 3350.0026
GLU 3360.0036
VAL 3370.0052
ILE 3380.0047
MET 3390.0046
CYS 3400.0043
ALA 3410.0041
GLY 3420.0041
ALA 3430.0045
VAL 3440.0050
HISD 3450.0046
THR 3460.0053
PRO 3470.0052
PHE 3480.0045
LEU 3490.0050
LEU 3500.0050
LYS 3510.0044
HISE 3520.0040
SER 3530.0060
GLY 3540.0056
VAL 3550.0062
GLY 3560.0065
PRO 3570.0053
SER 3580.0032
ALA 3590.0083
GLU 3600.0056
LEU 3610.0021
LYS 3620.0073
GLU 3630.0106
PHE 3640.0070
GLY 3650.0078
ILE 3660.0045
PRO 3670.0038
VAL 3680.0038
VAL 3690.0057
SER 3700.0070
ASN 3710.0066
LEU 3720.0077
ALA 3730.0093
GLY 3740.0050
VAL 3750.0045
GLY 3760.0049
GLN 3770.0019
ASN 3780.0027
LEU 3790.0034
GLN 3800.0053
ASP 3810.0045
GLN 3820.0037
PRO 3830.0042
ALA 3840.0050
CYS 3850.0061
LEU 3860.0060
THR 3870.0054
ALA 3880.0042
ALA 3890.0073
PRO 3900.0080
VAL 3910.0093
LYS 3920.0123
GLU 3930.0113
LYS 3940.0180
TYR 3950.0075
ASP 3960.0086
GLY 3970.0117
ILE 3980.0085
ALA 3990.0067
ILE 4000.0049
SER 4010.0081
ASP 4020.0078
HISE 4030.0082
ILE 4040.0088
TYR 4050.0083
ASN 4060.0090
GLU 4070.0097
LYS 4080.0035
GLY 4090.0056
GLN 4100.0063
ILE 4110.0101
ARG 4120.0118
LYS 4130.0157
ARG 4140.0068
ALA 4150.0118
ILE 4160.0140
ALA 4170.0087
SER 4180.0061
TYR 4190.0074
LEU 4200.0059
LEU 4210.0050
GLY 4220.0114
GLY 4230.0080
ARG 4240.0121
GLY 4250.0087
GLY 4260.0110
LEU 4270.0099
THR 4280.0101
SER 4290.0095
THR 4300.0085
GLY 4310.0102
CYS 4320.0101
ASP 4330.0101
ARG 4340.0096
GLY 4350.0078
ALA 4360.0061
PHE 4370.0081
VAL 4380.0078
ARG 4390.0079
THR 4400.0081
ALA 4410.0100
GLY 4420.0134
GLN 4430.0263
ALA 4440.0128
LEU 4450.0140
PRO 4460.0107
ASP 4470.0079
LEU 4480.0061
GLN 4490.0047
VAL 4500.0052
ARG 4510.0071
PHE 4520.0065
VAL 4530.0062
PRO 4540.0053
GLY 4550.0056
MET 4560.0052
ALA 4570.0050
LEU 4580.0065
ASP 4590.0029
PRO 4600.0028
ASP 4610.0030
GLY 4620.0043
VAL 4630.0045
SER 4640.0040
THR 4650.0051
TYR 4660.0048
VAL 4670.0059
ARG 4680.0068
PHE 4690.0074
ALA 4700.0064
LYS 4710.0062
PHE 4720.0082
GLN 4730.0047
SER 4740.0036
GLN 4750.0067
GLY 4760.0051
LEU 4770.0093
LYS 4780.0122
TRP 4790.0116
PRO 4800.0103
SER 4810.0099
GLY 4820.0069
ILE 4830.0063
THR 4840.0068
MET 4850.0059
GLN 4860.0060
LEU 4870.0057
ILE 4880.0038
ALA 4890.0026
CYS 4900.0039
ARG 4910.0041
PRO 4920.0038
GLN 4930.0060
SER 4940.0029
THR 4950.0034
GLY 4960.0042
SER 4970.0045
VAL 4980.0046
GLY 4990.0052
LEU 5000.0049
LYS 5010.0044
SER 5020.0037
ALA 5030.0043
ASP 5040.0058
PRO 5050.0069
PHE 5060.0053
ALA 5070.0059
PRO 5080.0051
PRO 5090.0063
LYS 5100.0073
LEU 5110.0077
SER 5120.0062
PRO 5130.0053
GLY 5140.0057
TYR 5150.0061
LEU 5160.0077
THR 5170.0070
ASP 5180.0027
LYS 5190.0109
ASP 5200.0162
GLY 5210.0054
ALA 5220.0050
ASP 5230.0033
LEU 5240.0026
ALA 5250.0029
THR 5260.0052
LEU 5270.0048
ARG 5280.0046
LYS 5290.0047
GLY 5300.0044
ILE 5310.0052
HISE 5320.0048
TRP 5330.0021
ALA 5340.0037
ARG 5350.0043
ASP 5360.0056
VAL 5370.0059
ALA 5380.0079
ARG 5390.0081
SER 5400.0090
SER 5410.0112
ALA 5420.0094
LEU 5430.0093
SER 5440.0102
GLU 5450.0107
TYR 5460.0106
LEU 5470.0106
ASP 5480.0104
GLY 5490.0073
GLU 5500.0053
LEU 5510.0026
PHE 5520.0031
PRO 5530.0045
GLY 5540.0064
SER 5550.0146
GLY 5560.0106
VAL 5570.0024
VAL 5580.0079
SER 5590.0104
ASP 5600.0029
ASP 5610.0082
GLN 5620.0084
ILE 5630.0069
ASP 5640.0081
GLU 5650.0091
TYR 5660.0087
ILE 5670.0085
ARG 5680.0083
ARG 5690.0073
SER 5700.0066
ILE 5710.0068
HISD 5720.0050
SER 5730.0044
SER 5740.0047
ASN 5750.0047
ALA 5760.0053
ILE 5770.0058
THR 5780.0058
GLY 5790.0043
THR 5800.0031
CYS 5810.0023
LYS 5820.0011
MET 5830.0023
GLY 5840.0078
ASN 5850.0176
ALA 5860.0268
GLY 5870.0312
ASP 5880.0237
SER 5890.0225
SER 5900.0107
SER 5910.0068
VAL 5920.0050
VAL 5930.0044
ASP 5940.0049
ASN 5950.0046
GLN 5960.0016
LEU 5970.0022
ARG 5980.0047
VAL 5990.0062
HISE 6000.0073
GLY 6010.0075
VAL 6020.0078
GLU 6030.0083
GLY 6040.0085
LEU 6050.0059
ARG 6060.0043
VAL 6070.0041
VAL 6080.0029
ASP 6090.0040
ALA 6100.0047
SER 6110.0046
VAL 6120.0036
VAL 6130.0047
PRO 6140.0067
LYS 6150.0066
ILE 6160.0057
PRO 6170.0065
GLY 6180.0046
GLY 6190.0019
GLN 6200.0042
THR 6210.0055
GLY 6220.0052
ALA 6230.0061
PRO 6240.0058
VAL 6250.0057
VAL 6260.0057
MET 6270.0047
ILE 6280.0040
ALA 6290.0025
GLU 6300.0027
ARG 6310.0013
ALA 6320.0017
ALA 6330.0027
ALA 6340.0016
LEU 6350.0014
LEU 6360.0029
THR 6370.0029
GLY 6380.0026
LYS 6390.0011
ALA 6400.0028
THR 6410.0043
ILE 6420.0052
GLY 6430.0059
ALA 6440.0042
SER 6450.0041
ALA 6460.0038
ALA 6470.0046
ALA 6480.0026
PRO 6490.0028

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.