CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0686
SER 770.0333
PRO 780.0200
VAL 790.0131
ALA 800.0187
GLY 810.0202
GLN 820.0190
LYS 830.0135
TYR 840.0111
ASP 850.0133
TYR 860.0039
ILE 870.0027
LEU 880.0037
VAL 890.0041
GLY 900.0041
GLY 910.0037
GLY 920.0031
THR 930.0031
ALA 940.0028
ALA 950.0042
CYS 960.0058
VAL 970.0053
LEU 980.0050
ALA 990.0069
ASN 1000.0093
ARG 1010.0072
LEU 1020.0070
SER 1030.0080
ALA 1040.0117
ASP 1050.0125
GLY 1060.0103
SER 1070.0108
LYS 1080.0104
ARG 1090.0113
VAL 1100.0052
LEU 1110.0024
VAL 1120.0027
LEU 1130.0043
GLU 1140.0043
ALA 1150.0047
GLY 1160.0038
PRO 1170.0042
ASP 1180.0050
ASN 1190.0052
THR 1200.0033
SER 1210.0038
ARG 1220.0077
ASP 1230.0050
VAL 1240.0025
LYS 1250.0058
ILE 1260.0054
PRO 1270.0049
ALA 1280.0027
ALA 1290.0030
ILE 1300.0014
THR 1310.0047
ARG 1320.0056
LEU 1330.0041
PHE 1340.0048
ARG 1350.0066
SER 1360.0069
PRO 1370.0047
LEU 1380.0031
ASP 1390.0034
TRP 1400.0042
ASN 1410.0060
LEU 1420.0065
PHE 1430.0100
SER 1440.0100
GLU 1450.0118
LEU 1460.0127
GLN 1470.0114
GLU 1480.0208
GLN 1490.0099
LEU 1500.0095
ALA 1510.0143
GLU 1520.0194
ARG 1530.0113
GLN 1540.0081
ILE 1550.0058
TYR 1560.0053
MET 1570.0046
ALA 1580.0030
ARG 1590.0020
GLY 1600.0012
ARG 1610.0033
LEU 1620.0034
LEU 1630.0034
GLY 1640.0032
GLY 1650.0029
SER 1660.0027
SER 1670.0033
ALA 1680.0026
THR 1690.0023
ASN 1700.0045
ALA 1710.0043
THR 1720.0049
LEU 1730.0052
TYR 1740.0039
HISD 1750.0042
ARG 1760.0064
GLY 1770.0067
ALA 1780.0069
ALA 1790.0057
GLY 1800.0081
ASP 1810.0083
TYR 1820.0068
ASP 1830.0082
ALA 1840.0129
TRP 1850.0121
GLY 1860.0131
VAL 1870.0132
GLU 1880.0135
GLY 1890.0112
TRP 1900.0097
SER 1910.0059
SER 1920.0038
GLU 1930.0030
ASP 1940.0034
VAL 1950.0010
LEU 1960.0067
SER 1970.0059
TRP 1980.0038
PHE 1990.0048
VAL 2000.0092
GLN 2010.0080
ALA 2020.0057
GLU 2030.0063
THR 2040.0141
ASN 2050.0161
ALA 2060.0438
ASP 2070.0475
PHE 2080.0328
GLY 2090.0314
PRO 2100.0208
GLY 2110.0190
ALA 2120.0270
TYR 2130.0225
HISH 2140.0094
GLY 2150.0066
SER 2160.0165
GLY 2170.0191
GLY 2180.0071
PRO 2190.0034
MET 2200.0031
ARG 2210.0047
VAL 2220.0057
GLU 2230.0077
ASN 2240.0096
PRO 2250.0103
ARG 2260.0130
TYR 2270.0080
THR 2280.0112
ASN 2290.0097
LYS 2300.0280
GLN 2310.0123
LEU 2320.0027
HISE 2330.0079
THR 2340.0079
ALA 2350.0068
PHE 2360.0048
PHE 2370.0039
LYS 2380.0070
ALA 2390.0037
ALA 2400.0053
GLU 2410.0113
GLU 2420.0110
VAL 2430.0101
GLY 2440.0163
LEU 2450.0160
THR 2460.0172
PRO 2470.0135
ASN 2480.0101
SER 2490.0116
ASP 2500.0118
PHE 2510.0101
ASN 2520.0096
ASP 2530.0101
TRP 2540.0117
SER 2550.0138
HISE 2560.0149
ASP 2570.0125
HISE 2580.0111
ALA 2590.0128
GLY 2600.0111
TYR 2610.0068
GLY 2620.0058
THR 2630.0049
PHE 2640.0053
GLN 2650.0065
VAL 2660.0074
MET 2670.0075
GLN 2680.0088
ASP 2690.0131
LYS 2700.0211
GLY 2710.0128
THR 2720.0099
ARG 2730.0080
ALA 2740.0085
ASP 2750.0063
MET 2760.0062
TYR 2770.0075
ARG 2780.0107
GLN 2790.0075
TYR 2800.0081
LEU 2810.0100
LYS 2820.0123
PRO 2830.0140
VAL 2840.0127
LEU 2850.0109
GLY 2860.0099
ARG 2870.0093
ARG 2880.0090
ASN 2890.0108
LEU 2900.0080
GLN 2910.0045
VAL 2920.0017
LEU 2930.0030
THR 2940.0040
GLY 2950.0055
ALA 2960.0063
ALA 2970.0060
VAL 2980.0063
THR 2990.0060
LYS 3000.0057
VAL 3010.0052
ASN 3020.0059
ILE 3030.0048
ASP 3040.0064
GLN 3050.0160
ALA 3060.0158
ALA 3070.0253
GLY 3080.0167
LYS 3090.0102
ALA 3100.0064
GLN 3110.0046
ALA 3120.0058
LEU 3130.0084
GLY 3140.0039
VAL 3150.0054
GLU 3160.0074
PHE 3170.0072
SER 3180.0068
THR 3190.0079
ASP 3200.0167
GLY 3210.0141
PRO 3220.0119
THR 3230.0255
GLY 3240.0218
GLU 3250.0180
ARG 3260.0081
LEU 3270.0093
SER 3280.0107
ALA 3290.0028
GLU 3300.0030
LEU 3310.0075
ALA 3320.0220
PRO 3330.0590
GLY 3340.0499
GLY 3350.0058
GLU 3360.0045
VAL 3370.0039
ILE 3380.0026
MET 3390.0030
CYS 3400.0027
ALA 3410.0036
GLY 3420.0038
ALA 3430.0044
VAL 3440.0042
HISD 3450.0030
THR 3460.0046
PRO 3470.0063
PHE 3480.0043
LEU 3490.0046
LEU 3500.0058
LYS 3510.0047
HISE 3520.0040
SER 3530.0038
GLY 3540.0031
VAL 3550.0041
GLY 3560.0049
PRO 3570.0047
SER 3580.0053
ALA 3590.0084
GLU 3600.0084
LEU 3610.0061
LYS 3620.0087
GLU 3630.0110
PHE 3640.0095
GLY 3650.0070
ILE 3660.0043
PRO 3670.0039
VAL 3680.0018
VAL 3690.0028
SER 3700.0021
ASN 3710.0022
LEU 3720.0038
ALA 3730.0053
GLY 3740.0079
VAL 3750.0078
GLY 3760.0081
GLN 3770.0075
ASN 3780.0079
LEU 3790.0058
GLN 3800.0054
ASP 3810.0044
GLN 3820.0044
PRO 3830.0019
ALA 3840.0026
CYS 3850.0031
LEU 3860.0024
THR 3870.0024
ALA 3880.0024
ALA 3890.0034
PRO 3900.0038
VAL 3910.0046
LYS 3920.0144
GLU 3930.0108
LYS 3940.0099
TYR 3950.0048
ASP 3960.0124
GLY 3970.0157
ILE 3980.0060
ALA 3990.0050
ILE 4000.0057
SER 4010.0115
ASP 4020.0120
HISE 4030.0105
ILE 4040.0132
TYR 4050.0092
ASN 4060.0088
GLU 4070.0186
LYS 4080.0160
GLY 4090.0029
GLN 4100.0033
ILE 4110.0089
ARG 4120.0133
LYS 4130.0110
ARG 4140.0161
ALA 4150.0182
ILE 4160.0107
ALA 4170.0088
SER 4180.0072
TYR 4190.0015
LEU 4200.0024
LEU 4210.0081
GLY 4220.0155
GLY 4230.0129
ARG 4240.0067
GLY 4250.0027
GLY 4260.0052
LEU 4270.0061
THR 4280.0059
SER 4290.0038
THR 4300.0034
GLY 4310.0042
CYS 4320.0046
ASP 4330.0058
ARG 4340.0057
GLY 4350.0049
ALA 4360.0055
PHE 4370.0091
VAL 4380.0099
ARG 4390.0087
THR 4400.0052
ALA 4410.0051
GLY 4420.0057
GLN 4430.0162
ALA 4440.0086
LEU 4450.0085
PRO 4460.0073
ASP 4470.0071
LEU 4480.0065
GLN 4490.0048
VAL 4500.0039
ARG 4510.0028
PHE 4520.0026
VAL 4530.0022
PRO 4540.0019
GLY 4550.0028
MET 4560.0024
ALA 4570.0023
LEU 4580.0057
ASP 4590.0030
PRO 4600.0030
ASP 4610.0027
GLY 4620.0039
VAL 4630.0031
SER 4640.0050
THR 4650.0060
TYR 4660.0059
VAL 4670.0089
ARG 4680.0092
PHE 4690.0091
ALA 4700.0101
LYS 4710.0102
PHE 4720.0083
GLN 4730.0070
SER 4740.0109
GLN 4750.0117
GLY 4760.0088
LEU 4770.0046
LYS 4780.0034
TRP 4790.0063
PRO 4800.0071
SER 4810.0076
GLY 4820.0008
ILE 4830.0012
THR 4840.0016
MET 4850.0022
GLN 4860.0024
LEU 4870.0024
ILE 4880.0031
ALA 4890.0041
CYS 4900.0046
ARG 4910.0056
PRO 4920.0058
GLN 4930.0065
SER 4940.0045
THR 4950.0050
GLY 4960.0059
SER 4970.0070
VAL 4980.0055
GLY 4990.0051
LEU 5000.0052
LYS 5010.0063
SER 5020.0059
ALA 5030.0047
ASP 5040.0032
PRO 5050.0016
PHE 5060.0025
ALA 5070.0039
PRO 5080.0044
PRO 5090.0052
LYS 5100.0068
LEU 5110.0068
SER 5120.0062
PRO 5130.0052
GLY 5140.0055
TYR 5150.0021
LEU 5160.0023
THR 5170.0009
ASP 5180.0039
LYS 5190.0057
ASP 5200.0073
GLY 5210.0028
ALA 5220.0031
ASP 5230.0025
LEU 5240.0014
ALA 5250.0014
THR 5260.0019
LEU 5270.0005
ARG 5280.0006
LYS 5290.0013
GLY 5300.0018
ILE 5310.0020
HISE 5320.0018
TRP 5330.0045
ALA 5340.0040
ARG 5350.0033
ASP 5360.0032
VAL 5370.0010
ALA 5380.0031
ARG 5390.0046
SER 5400.0046
SER 5410.0074
ALA 5420.0088
LEU 5430.0072
SER 5440.0088
GLU 5450.0137
TYR 5460.0079
LEU 5470.0088
ASP 5480.0117
GLY 5490.0095
GLU 5500.0061
LEU 5510.0034
PHE 5520.0031
PRO 5530.0035
GLY 5540.0030
SER 5550.0039
GLY 5560.0037
VAL 5570.0039
VAL 5580.0089
SER 5590.0061
ASP 5600.0066
ASP 5610.0104
GLN 5620.0067
ILE 5630.0044
ASP 5640.0057
GLU 5650.0049
TYR 5660.0048
ILE 5670.0046
ARG 5680.0045
ARG 5690.0057
SER 5700.0053
ILE 5710.0043
HISD 5720.0027
SER 5730.0024
SER 5740.0031
ASN 5750.0029
ALA 5760.0031
ILE 5770.0037
THR 5780.0057
GLY 5790.0073
THR 5800.0073
CYS 5810.0086
LYS 5820.0090
MET 5830.0087
GLY 5840.0089
ASN 5850.0044
ALA 5860.0192
GLY 5870.0686
ASP 5880.0359
SER 5890.0130
SER 5900.0095
SER 5910.0057
VAL 5920.0064
VAL 5930.0078
ASP 5940.0088
ASN 5950.0104
GLN 5960.0084
LEU 5970.0073
ARG 5980.0075
VAL 5990.0052
HISE 6000.0054
GLY 6010.0056
VAL 6020.0044
GLU 6030.0049
GLY 6040.0052
LEU 6050.0035
ARG 6060.0040
VAL 6070.0040
VAL 6080.0040
ASP 6090.0036
ALA 6100.0036
SER 6110.0067
VAL 6120.0075
VAL 6130.0075
PRO 6140.0104
LYS 6150.0087
ILE 6160.0062
PRO 6170.0047
GLY 6180.0057
GLY 6190.0043
GLN 6200.0015
THR 6210.0016
GLY 6220.0017
ALA 6230.0019
PRO 6240.0013
VAL 6250.0014
VAL 6260.0015
MET 6270.0012
ILE 6280.0031
ALA 6290.0012
GLU 6300.0021
ARG 6310.0039
ALA 6320.0044
ALA 6330.0047
ALA 6340.0047
LEU 6350.0019
LEU 6360.0032
THR 6370.0033
GLY 6380.0207
LYS 6390.0227
ALA 6400.0081
THR 6410.0103
ILE 6420.0099
GLY 6430.0102
ALA 6440.0020
SER 6450.0033
ALA 6460.0028
ALA 6470.0041
ALA 6480.0062
PRO 6490.0077

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.