CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 61  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0518
SER 770.0361
PRO 780.0252
VAL 790.0199
ALA 800.0274
GLY 810.0249
GLN 820.0200
LYS 830.0112
TYR 840.0090
ASP 850.0049
TYR 860.0065
ILE 870.0083
LEU 880.0084
VAL 890.0056
GLY 900.0071
GLY 910.0085
GLY 920.0045
THR 930.0034
ALA 940.0039
ALA 950.0054
CYS 960.0045
VAL 970.0052
LEU 980.0058
ALA 990.0057
ASN 1000.0063
ARG 1010.0062
LEU 1020.0067
SER 1030.0051
ALA 1040.0069
ASP 1050.0087
GLY 1060.0093
SER 1070.0061
LYS 1080.0071
ARG 1090.0097
VAL 1100.0093
LEU 1110.0113
VAL 1120.0118
LEU 1130.0134
GLU 1140.0132
ALA 1150.0131
GLY 1160.0123
PRO 1170.0111
ASP 1180.0101
ASN 1190.0080
THR 1200.0092
SER 1210.0064
ARG 1220.0148
ASP 1230.0103
VAL 1240.0033
LYS 1250.0070
ILE 1260.0069
PRO 1270.0046
ALA 1280.0063
ALA 1290.0068
ILE 1300.0056
THR 1310.0050
ARG 1320.0040
LEU 1330.0031
PHE 1340.0014
ARG 1350.0050
SER 1360.0054
PRO 1370.0059
LEU 1380.0054
ASP 1390.0061
TRP 1400.0089
ASN 1410.0089
LEU 1420.0095
PHE 1430.0108
SER 1440.0081
GLU 1450.0085
LEU 1460.0111
GLN 1470.0061
GLU 1480.0109
GLN 1490.0065
LEU 1500.0073
ALA 1510.0095
GLU 1520.0143
ARG 1530.0106
GLN 1540.0080
ILE 1550.0055
TYR 1560.0055
MET 1570.0035
ALA 1580.0038
ARG 1590.0040
GLY 1600.0039
ARG 1610.0082
LEU 1620.0078
LEU 1630.0087
GLY 1640.0053
GLY 1650.0052
SER 1660.0051
SER 1670.0025
ALA 1680.0013
THR 1690.0012
ASN 1700.0013
ALA 1710.0011
THR 1720.0012
LEU 1730.0038
TYR 1740.0031
HISD 1750.0033
ARG 1760.0052
GLY 1770.0048
ALA 1780.0045
ALA 1790.0097
GLY 1800.0109
ASP 1810.0099
TYR 1820.0101
ASP 1830.0126
ALA 1840.0164
TRP 1850.0135
GLY 1860.0125
VAL 1870.0113
GLU 1880.0071
GLY 1890.0044
TRP 1900.0064
SER 1910.0090
SER 1920.0101
GLU 1930.0090
ASP 1940.0040
VAL 1950.0036
LEU 1960.0044
SER 1970.0043
TRP 1980.0034
PHE 1990.0033
VAL 2000.0047
GLN 2010.0059
ALA 2020.0055
GLU 2030.0055
THR 2040.0045
ASN 2050.0015
ALA 2060.0040
ASP 2070.0093
PHE 2080.0119
GLY 2090.0093
PRO 2100.0163
GLY 2110.0234
ALA 2120.0189
TYR 2130.0134
HISH 2140.0102
GLY 2150.0082
SER 2160.0110
GLY 2170.0096
GLY 2180.0076
PRO 2190.0083
MET 2200.0063
ARG 2210.0080
VAL 2220.0052
GLU 2230.0073
ASN 2240.0051
PRO 2250.0057
ARG 2260.0082
TYR 2270.0090
THR 2280.0116
ASN 2290.0103
LYS 2300.0393
GLN 2310.0173
LEU 2320.0041
HISE 2330.0109
THR 2340.0111
ALA 2350.0080
PHE 2360.0072
PHE 2370.0068
LYS 2380.0084
ALA 2390.0056
ALA 2400.0062
GLU 2410.0124
GLU 2420.0136
VAL 2430.0122
GLY 2440.0181
LEU 2450.0172
THR 2460.0212
PRO 2470.0206
ASN 2480.0154
SER 2490.0175
ASP 2500.0110
PHE 2510.0046
ASN 2520.0057
ASP 2530.0075
TRP 2540.0076
SER 2550.0100
HISE 2560.0142
ASP 2570.0073
HISE 2580.0021
ALA 2590.0047
GLY 2600.0068
TYR 2610.0055
GLY 2620.0103
THR 2630.0068
PHE 2640.0051
GLN 2650.0037
VAL 2660.0031
MET 2670.0028
GLN 2680.0044
ASP 2690.0099
LYS 2700.0163
GLY 2710.0062
THR 2720.0045
ARG 2730.0042
ALA 2740.0058
ASP 2750.0047
MET 2760.0046
TYR 2770.0034
ARG 2780.0083
GLN 2790.0072
TYR 2800.0071
LEU 2810.0060
LYS 2820.0048
PRO 2830.0057
VAL 2840.0043
LEU 2850.0035
GLY 2860.0059
ARG 2870.0113
ARG 2880.0157
ASN 2890.0118
LEU 2900.0078
GLN 2910.0114
VAL 2920.0130
LEU 2930.0162
THR 2940.0155
GLY 2950.0156
ALA 2960.0126
ALA 2970.0113
VAL 2980.0088
THR 2990.0069
LYS 3000.0056
VAL 3010.0043
ASN 3020.0064
ILE 3030.0073
ASP 3040.0069
GLN 3050.0081
ALA 3060.0170
ALA 3070.0221
GLY 3080.0071
LYS 3090.0110
ALA 3100.0111
GLN 3110.0113
ALA 3120.0099
LEU 3130.0069
GLY 3140.0067
VAL 3150.0086
GLU 3160.0104
PHE 3170.0133
SER 3180.0106
THR 3190.0121
ASP 3200.0128
GLY 3210.0101
PRO 3220.0133
THR 3230.0316
GLY 3240.0178
GLU 3250.0155
ARG 3260.0121
LEU 3270.0158
SER 3280.0194
ALA 3290.0152
GLU 3300.0109
LEU 3310.0059
ALA 3320.0039
PRO 3330.0086
GLY 3340.0128
GLY 3350.0045
GLU 3360.0051
VAL 3370.0057
ILE 3380.0044
MET 3390.0038
CYS 3400.0034
ALA 3410.0036
GLY 3420.0043
ALA 3430.0049
VAL 3440.0049
HISD 3450.0059
THR 3460.0069
PRO 3470.0057
PHE 3480.0057
LEU 3490.0054
LEU 3500.0085
LYS 3510.0069
HISE 3520.0063
SER 3530.0055
GLY 3540.0055
VAL 3550.0083
GLY 3560.0124
PRO 3570.0119
SER 3580.0089
ALA 3590.0125
GLU 3600.0110
LEU 3610.0066
LYS 3620.0071
GLU 3630.0090
PHE 3640.0026
GLY 3650.0020
ILE 3660.0022
PRO 3670.0018
VAL 3680.0051
VAL 3690.0066
SER 3700.0086
ASN 3710.0118
LEU 3720.0130
ALA 3730.0142
GLY 3740.0135
VAL 3750.0130
GLY 3760.0121
GLN 3770.0123
ASN 3780.0119
LEU 3790.0092
GLN 3800.0060
ASP 3810.0028
GLN 3820.0041
PRO 3830.0053
ALA 3840.0064
CYS 3850.0065
LEU 3860.0060
THR 3870.0036
ALA 3880.0034
ALA 3890.0022
PRO 3900.0024
VAL 3910.0047
LYS 3920.0093
GLU 3930.0145
LYS 3940.0153
TYR 3950.0091
ASP 3960.0093
GLY 3970.0091
ILE 3980.0025
ALA 3990.0016
ILE 4000.0015
SER 4010.0019
ASP 4020.0027
HISE 4030.0029
ILE 4040.0046
TYR 4050.0041
ASN 4060.0048
GLU 4070.0063
LYS 4080.0058
GLY 4090.0041
GLN 4100.0039
ILE 4110.0056
ARG 4120.0069
LYS 4130.0068
ARG 4140.0113
ALA 4150.0143
ILE 4160.0113
ALA 4170.0100
SER 4180.0109
TYR 4190.0063
LEU 4200.0040
LEU 4210.0087
GLY 4220.0159
GLY 4230.0063
ARG 4240.0080
GLY 4250.0069
GLY 4260.0086
LEU 4270.0066
THR 4280.0027
SER 4290.0040
THR 4300.0053
GLY 4310.0074
CYS 4320.0073
ASP 4330.0072
ARG 4340.0082
GLY 4350.0060
ALA 4360.0038
PHE 4370.0026
VAL 4380.0064
ARG 4390.0092
THR 4400.0169
ALA 4410.0221
GLY 4420.0212
GLN 4430.0337
ALA 4440.0228
LEU 4450.0091
PRO 4460.0060
ASP 4470.0070
LEU 4480.0045
GLN 4490.0035
VAL 4500.0028
ARG 4510.0031
PHE 4520.0042
VAL 4530.0035
PRO 4540.0036
GLY 4550.0039
MET 4560.0028
ALA 4570.0050
LEU 4580.0079
ASP 4590.0090
PRO 4600.0092
ASP 4610.0085
GLY 4620.0086
VAL 4630.0071
SER 4640.0073
THR 4650.0081
TYR 4660.0065
VAL 4670.0063
ARG 4680.0070
PHE 4690.0067
ALA 4700.0063
LYS 4710.0065
PHE 4720.0065
GLN 4730.0060
SER 4740.0062
GLN 4750.0064
GLY 4760.0069
LEU 4770.0060
LYS 4780.0050
TRP 4790.0044
PRO 4800.0018
SER 4810.0029
GLY 4820.0014
ILE 4830.0011
THR 4840.0012
MET 4850.0024
GLN 4860.0040
LEU 4870.0047
ILE 4880.0047
ALA 4890.0047
CYS 4900.0057
ARG 4910.0049
PRO 4920.0055
GLN 4930.0057
SER 4940.0083
THR 4950.0071
GLY 4960.0055
SER 4970.0081
VAL 4980.0085
GLY 4990.0099
LEU 5000.0087
LYS 5010.0074
SER 5020.0076
ALA 5030.0069
ASP 5040.0082
PRO 5050.0105
PHE 5060.0100
ALA 5070.0112
PRO 5080.0098
PRO 5090.0093
LYS 5100.0094
LEU 5110.0080
SER 5120.0054
PRO 5130.0048
GLY 5140.0053
TYR 5150.0043
LEU 5160.0052
THR 5170.0042
ASP 5180.0085
LYS 5190.0088
ASP 5200.0114
GLY 5210.0052
ALA 5220.0053
ASP 5230.0045
LEU 5240.0024
ALA 5250.0038
THR 5260.0050
LEU 5270.0038
ARG 5280.0018
LYS 5290.0054
GLY 5300.0059
ILE 5310.0031
HISE 5320.0037
TRP 5330.0062
ALA 5340.0036
ARG 5350.0027
ASP 5360.0055
VAL 5370.0045
ALA 5380.0034
ARG 5390.0053
SER 5400.0066
SER 5410.0083
ALA 5420.0075
LEU 5430.0067
SER 5440.0071
GLU 5450.0060
TYR 5460.0041
LEU 5470.0044
ASP 5480.0085
GLY 5490.0087
GLU 5500.0053
LEU 5510.0062
PHE 5520.0067
PRO 5530.0067
GLY 5540.0129
SER 5550.0233
GLY 5560.0139
VAL 5570.0145
VAL 5580.0276
SER 5590.0153
ASP 5600.0267
ASP 5610.0258
GLN 5620.0108
ILE 5630.0066
ASP 5640.0081
GLU 5650.0115
TYR 5660.0081
ILE 5670.0066
ARG 5680.0075
ARG 5690.0082
SER 5700.0088
ILE 5710.0084
HISD 5720.0040
SER 5730.0035
SER 5740.0052
ASN 5750.0009
ALA 5760.0032
ILE 5770.0043
THR 5780.0075
GLY 5790.0098
THR 5800.0108
CYS 5810.0143
LYS 5820.0135
MET 5830.0119
GLY 5840.0124
ASN 5850.0067
ALA 5860.0133
GLY 5870.0518
ASP 5880.0264
SER 5890.0112
SER 5900.0160
SER 5910.0133
VAL 5920.0130
VAL 5930.0115
ASP 5940.0096
ASN 5950.0087
GLN 5960.0098
LEU 5970.0105
ARG 5980.0127
VAL 5990.0117
HISE 6000.0115
GLY 6010.0124
VAL 6020.0129
GLU 6030.0130
GLY 6040.0115
LEU 6050.0090
ARG 6060.0078
VAL 6070.0079
VAL 6080.0042
ASP 6090.0052
ALA 6100.0060
SER 6110.0101
VAL 6120.0095
VAL 6130.0091
PRO 6140.0132
LYS 6150.0105
ILE 6160.0061
PRO 6170.0052
GLY 6180.0047
GLY 6190.0035
GLN 6200.0025
THR 6210.0024
GLY 6220.0018
ALA 6230.0025
PRO 6240.0026
VAL 6250.0033
VAL 6260.0042
MET 6270.0037
ILE 6280.0055
ALA 6290.0054
GLU 6300.0057
ARG 6310.0067
ALA 6320.0094
ALA 6330.0099
ALA 6340.0098
LEU 6350.0093
LEU 6360.0087
THR 6370.0085
GLY 6380.0099
LYS 6390.0153
ALA 6400.0089
THR 6410.0149
ILE 6420.0098
GLY 6430.0093
ALA 6440.0052
SER 6450.0032
ALA 6460.0033
ALA 6470.0031
ALA 6480.0007
PRO 6490.0023

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.