CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 62  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0716
SER 770.0196
PRO 780.0140
VAL 790.0090
ALA 800.0187
GLY 810.0236
GLN 820.0163
LYS 830.0099
TYR 840.0059
ASP 850.0088
TYR 860.0051
ILE 870.0045
LEU 880.0054
VAL 890.0047
GLY 900.0048
GLY 910.0058
GLY 920.0054
THR 930.0050
ALA 940.0043
ALA 950.0030
CYS 960.0015
VAL 970.0033
LEU 980.0018
ALA 990.0026
ASN 1000.0055
ARG 1010.0033
LEU 1020.0029
SER 1030.0051
ALA 1040.0058
ASP 1050.0069
GLY 1060.0137
SER 1070.0097
LYS 1080.0086
ARG 1090.0072
VAL 1100.0068
LEU 1110.0067
VAL 1120.0068
LEU 1130.0063
GLU 1140.0077
ALA 1150.0089
GLY 1160.0122
PRO 1170.0118
ASP 1180.0101
ASN 1190.0093
THR 1200.0087
SER 1210.0085
ARG 1220.0076
ASP 1230.0057
VAL 1240.0072
LYS 1250.0063
ILE 1260.0043
PRO 1270.0047
ALA 1280.0050
ALA 1290.0025
ILE 1300.0028
THR 1310.0042
ARG 1320.0012
LEU 1330.0046
PHE 1340.0060
ARG 1350.0067
SER 1360.0087
PRO 1370.0115
LEU 1380.0112
ASP 1390.0116
TRP 1400.0088
ASN 1410.0081
LEU 1420.0064
PHE 1430.0058
SER 1440.0055
GLU 1450.0067
LEU 1460.0118
GLN 1470.0085
GLU 1480.0126
GLN 1490.0067
LEU 1500.0063
ALA 1510.0092
GLU 1520.0125
ARG 1530.0093
GLN 1540.0081
ILE 1550.0029
TYR 1560.0049
MET 1570.0054
ALA 1580.0083
ARG 1590.0089
GLY 1600.0100
ARG 1610.0117
LEU 1620.0097
LEU 1630.0075
GLY 1640.0070
GLY 1650.0091
SER 1660.0099
SER 1670.0079
ALA 1680.0066
THR 1690.0081
ASN 1700.0037
ALA 1710.0025
THR 1720.0036
LEU 1730.0036
TYR 1740.0040
HISD 1750.0043
ARG 1760.0058
GLY 1770.0047
ALA 1780.0027
ALA 1790.0040
GLY 1800.0044
ASP 1810.0049
TYR 1820.0044
ASP 1830.0051
ALA 1840.0067
TRP 1850.0070
GLY 1860.0083
VAL 1870.0072
GLU 1880.0094
GLY 1890.0076
TRP 1900.0058
SER 1910.0047
SER 1920.0034
GLU 1930.0036
ASP 1940.0036
VAL 1950.0028
LEU 1960.0034
SER 1970.0034
TRP 1980.0028
PHE 1990.0024
VAL 2000.0046
GLN 2010.0057
ALA 2020.0054
GLU 2030.0048
THR 2040.0093
ASN 2050.0077
ALA 2060.0186
ASP 2070.0152
PHE 2080.0064
GLY 2090.0192
PRO 2100.0270
GLY 2110.0322
ALA 2120.0250
TYR 2130.0165
HISH 2140.0067
GLY 2150.0076
SER 2160.0144
GLY 2170.0158
GLY 2180.0060
PRO 2190.0075
MET 2200.0071
ARG 2210.0043
VAL 2220.0034
GLU 2230.0025
ASN 2240.0048
PRO 2250.0054
ARG 2260.0076
TYR 2270.0100
THR 2280.0104
ASN 2290.0102
LYS 2300.0167
GLN 2310.0140
LEU 2320.0111
HISE 2330.0106
THR 2340.0097
ALA 2350.0126
PHE 2360.0109
PHE 2370.0069
LYS 2380.0137
ALA 2390.0171
ALA 2400.0117
GLU 2410.0166
GLU 2420.0236
VAL 2430.0221
GLY 2440.0227
LEU 2450.0152
THR 2460.0167
PRO 2470.0141
ASN 2480.0164
SER 2490.0226
ASP 2500.0191
PHE 2510.0110
ASN 2520.0105
ASP 2530.0105
TRP 2540.0064
SER 2550.0103
HISE 2560.0131
ASP 2570.0085
HISE 2580.0072
ALA 2590.0060
GLY 2600.0088
TYR 2610.0050
GLY 2620.0093
THR 2630.0065
PHE 2640.0066
GLN 2650.0071
VAL 2660.0022
MET 2670.0027
GLN 2680.0028
ASP 2690.0039
LYS 2700.0060
GLY 2710.0054
THR 2720.0007
ARG 2730.0023
ALA 2740.0030
ASP 2750.0058
MET 2760.0054
TYR 2770.0039
ARG 2780.0056
GLN 2790.0067
TYR 2800.0074
LEU 2810.0070
LYS 2820.0103
PRO 2830.0165
VAL 2840.0185
LEU 2850.0169
GLY 2860.0246
ARG 2870.0270
ARG 2880.0330
ASN 2890.0234
LEU 2900.0081
GLN 2910.0082
VAL 2920.0064
LEU 2930.0090
THR 2940.0108
GLY 2950.0110
ALA 2960.0067
ALA 2970.0068
VAL 2980.0061
THR 2990.0068
LYS 3000.0051
VAL 3010.0035
ASN 3020.0042
ILE 3030.0039
ASP 3040.0051
GLN 3050.0089
ALA 3060.0077
ALA 3070.0078
GLY 3080.0107
LYS 3090.0077
ALA 3100.0063
GLN 3110.0047
ALA 3120.0045
LEU 3130.0059
GLY 3140.0037
VAL 3150.0037
GLU 3160.0047
PHE 3170.0065
SER 3180.0065
THR 3190.0054
ASP 3200.0108
GLY 3210.0088
PRO 3220.0073
THR 3230.0173
GLY 3240.0090
GLU 3250.0140
ARG 3260.0068
LEU 3270.0056
SER 3280.0052
ALA 3290.0040
GLU 3300.0080
LEU 3310.0069
ALA 3320.0212
PRO 3330.0716
GLY 3340.0603
GLY 3350.0055
GLU 3360.0044
VAL 3370.0039
ILE 3380.0035
MET 3390.0034
CYS 3400.0041
ALA 3410.0033
GLY 3420.0030
ALA 3430.0035
VAL 3440.0036
HISD 3450.0032
THR 3460.0024
PRO 3470.0020
PHE 3480.0023
LEU 3490.0023
LEU 3500.0027
LYS 3510.0026
HISE 3520.0029
SER 3530.0030
GLY 3540.0019
VAL 3550.0029
GLY 3560.0031
PRO 3570.0030
SER 3580.0027
ALA 3590.0024
GLU 3600.0030
LEU 3610.0033
LYS 3620.0051
GLU 3630.0061
PHE 3640.0076
GLY 3650.0075
ILE 3660.0057
PRO 3670.0048
VAL 3680.0016
VAL 3690.0022
SER 3700.0036
ASN 3710.0044
LEU 3720.0046
ALA 3730.0048
GLY 3740.0030
VAL 3750.0025
GLY 3760.0024
GLN 3770.0022
ASN 3780.0023
LEU 3790.0023
GLN 3800.0035
ASP 3810.0031
GLN 3820.0029
PRO 3830.0015
ALA 3840.0016
CYS 3850.0016
LEU 3860.0023
THR 3870.0031
ALA 3880.0045
ALA 3890.0074
PRO 3900.0068
VAL 3910.0080
LYS 3920.0184
GLU 3930.0351
LYS 3940.0408
TYR 3950.0180
ASP 3960.0213
GLY 3970.0211
ILE 3980.0043
ALA 3990.0017
ILE 4000.0040
SER 4010.0064
ASP 4020.0049
HISE 4030.0056
ILE 4040.0143
TYR 4050.0142
ASN 4060.0140
GLU 4070.0151
LYS 4080.0216
GLY 4090.0164
GLN 4100.0187
ILE 4110.0173
ARG 4120.0138
LYS 4130.0117
ARG 4140.0136
ALA 4150.0124
ILE 4160.0065
ALA 4170.0102
SER 4180.0108
TYR 4190.0079
LEU 4200.0142
LEU 4210.0175
GLY 4220.0183
GLY 4230.0134
ARG 4240.0156
GLY 4250.0123
GLY 4260.0129
LEU 4270.0109
THR 4280.0075
SER 4290.0081
THR 4300.0077
GLY 4310.0070
CYS 4320.0056
ASP 4330.0054
ARG 4340.0060
GLY 4350.0043
ALA 4360.0029
PHE 4370.0038
VAL 4380.0042
ARG 4390.0050
THR 4400.0099
ALA 4410.0125
GLY 4420.0119
GLN 4430.0235
ALA 4440.0152
LEU 4450.0052
PRO 4460.0028
ASP 4470.0038
LEU 4480.0029
GLN 4490.0024
VAL 4500.0024
ARG 4510.0030
PHE 4520.0060
VAL 4530.0066
PRO 4540.0073
GLY 4550.0012
MET 4560.0013
ALA 4570.0012
LEU 4580.0035
ASP 4590.0029
PRO 4600.0032
ASP 4610.0035
GLY 4620.0042
VAL 4630.0034
SER 4640.0035
THR 4650.0050
TYR 4660.0045
VAL 4670.0052
ARG 4680.0080
PHE 4690.0097
ALA 4700.0109
LYS 4710.0114
PHE 4720.0112
GLN 4730.0145
SER 4740.0159
GLN 4750.0153
GLY 4760.0164
LEU 4770.0124
LYS 4780.0119
TRP 4790.0041
PRO 4800.0037
SER 4810.0063
GLY 4820.0052
ILE 4830.0059
THR 4840.0055
MET 4850.0052
GLN 4860.0043
LEU 4870.0028
ILE 4880.0021
ALA 4890.0023
CYS 4900.0024
ARG 4910.0022
PRO 4920.0014
GLN 4930.0009
SER 4940.0008
THR 4950.0011
GLY 4960.0014
SER 4970.0015
VAL 4980.0015
GLY 4990.0015
LEU 5000.0047
LYS 5010.0048
SER 5020.0047
ALA 5030.0071
ASP 5040.0062
PRO 5050.0067
PHE 5060.0054
ALA 5070.0038
PRO 5080.0045
PRO 5090.0020
LYS 5100.0024
LEU 5110.0029
SER 5120.0031
PRO 5130.0021
GLY 5140.0015
TYR 5150.0008
LEU 5160.0017
THR 5170.0015
ASP 5180.0015
LYS 5190.0070
ASP 5200.0129
GLY 5210.0045
ALA 5220.0046
ASP 5230.0026
LEU 5240.0022
ALA 5250.0028
THR 5260.0036
LEU 5270.0022
ARG 5280.0027
LYS 5290.0032
GLY 5300.0006
ILE 5310.0011
HISE 5320.0017
TRP 5330.0044
ALA 5340.0055
ARG 5350.0067
ASP 5360.0146
VAL 5370.0129
ALA 5380.0146
ARG 5390.0168
SER 5400.0188
SER 5410.0236
ALA 5420.0172
LEU 5430.0155
SER 5440.0156
GLU 5450.0116
TYR 5460.0112
LEU 5470.0087
ASP 5480.0079
GLY 5490.0076
GLU 5500.0072
LEU 5510.0043
PHE 5520.0030
PRO 5530.0024
GLY 5540.0029
SER 5550.0214
GLY 5560.0209
VAL 5570.0064
VAL 5580.0117
SER 5590.0106
ASP 5600.0083
ASP 5610.0051
GLN 5620.0029
ILE 5630.0042
ASP 5640.0049
GLU 5650.0039
TYR 5660.0033
ILE 5670.0032
ARG 5680.0037
ARG 5690.0038
SER 5700.0024
ILE 5710.0021
HISD 5720.0020
SER 5730.0024
SER 5740.0033
ASN 5750.0047
ALA 5760.0051
ILE 5770.0049
THR 5780.0038
GLY 5790.0030
THR 5800.0026
CYS 5810.0034
LYS 5820.0037
MET 5830.0028
GLY 5840.0049
ASN 5850.0073
ALA 5860.0079
GLY 5870.0129
ASP 5880.0115
SER 5890.0116
SER 5900.0081
SER 5910.0056
VAL 5920.0040
VAL 5930.0032
ASP 5940.0030
ASN 5950.0043
GLN 5960.0032
LEU 5970.0028
ARG 5980.0041
VAL 5990.0049
HISE 6000.0054
GLY 6010.0061
VAL 6020.0060
GLU 6030.0051
GLY 6040.0036
LEU 6050.0043
ARG 6060.0037
VAL 6070.0035
VAL 6080.0020
ASP 6090.0027
ALA 6100.0032
SER 6110.0034
VAL 6120.0027
VAL 6130.0030
PRO 6140.0043
LYS 6150.0043
ILE 6160.0042
PRO 6170.0031
GLY 6180.0025
GLY 6190.0024
GLN 6200.0017
THR 6210.0029
GLY 6220.0027
ALA 6230.0017
PRO 6240.0021
VAL 6250.0026
VAL 6260.0042
MET 6270.0035
ILE 6280.0028
ALA 6290.0039
GLU 6300.0039
ARG 6310.0034
ALA 6320.0025
ALA 6330.0021
ALA 6340.0025
LEU 6350.0021
LEU 6360.0033
THR 6370.0034
GLY 6380.0060
LYS 6390.0064
ALA 6400.0059
THR 6410.0096
ILE 6420.0085
GLY 6430.0105
ALA 6440.0077
SER 6450.0028
ALA 6460.0051
ALA 6470.0037
ALA 6480.0046
PRO 6490.0068

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.