CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 64  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0585
SER 770.0187
PRO 780.0150
VAL 790.0090
ALA 800.0123
GLY 810.0116
GLN 820.0084
LYS 830.0060
TYR 840.0055
ASP 850.0042
TYR 860.0043
ILE 870.0049
LEU 880.0050
VAL 890.0040
GLY 900.0037
GLY 910.0034
GLY 920.0022
THR 930.0026
ALA 940.0028
ALA 950.0024
CYS 960.0015
VAL 970.0011
LEU 980.0024
ALA 990.0023
ASN 1000.0045
ARG 1010.0025
LEU 1020.0022
SER 1030.0038
ALA 1040.0100
ASP 1050.0112
GLY 1060.0133
SER 1070.0070
LYS 1080.0055
ARG 1090.0042
VAL 1100.0055
LEU 1110.0061
VAL 1120.0063
LEU 1130.0054
GLU 1140.0052
ALA 1150.0068
GLY 1160.0129
PRO 1170.0124
ASP 1180.0107
ASN 1190.0117
THR 1200.0124
SER 1210.0114
ARG 1220.0097
ASP 1230.0092
VAL 1240.0096
LYS 1250.0073
ILE 1260.0055
PRO 1270.0058
ALA 1280.0054
ALA 1290.0067
ILE 1300.0085
THR 1310.0083
ARG 1320.0089
LEU 1330.0112
PHE 1340.0112
ARG 1350.0112
SER 1360.0120
PRO 1370.0131
LEU 1380.0121
ASP 1390.0129
TRP 1400.0087
ASN 1410.0095
LEU 1420.0081
PHE 1430.0071
SER 1440.0031
GLU 1450.0033
LEU 1460.0051
GLN 1470.0056
GLU 1480.0069
GLN 1490.0057
LEU 1500.0053
ALA 1510.0049
GLU 1520.0069
ARG 1530.0058
GLN 1540.0049
ILE 1550.0069
TYR 1560.0079
MET 1570.0075
ALA 1580.0092
ARG 1590.0088
GLY 1600.0086
ARG 1610.0114
LEU 1620.0089
LEU 1630.0067
GLY 1640.0056
GLY 1650.0073
SER 1660.0084
SER 1670.0079
ALA 1680.0068
THR 1690.0089
ASN 1700.0063
ALA 1710.0052
THR 1720.0055
LEU 1730.0023
TYR 1740.0024
HISD 1750.0033
ARG 1760.0058
GLY 1770.0066
ALA 1780.0069
ALA 1790.0087
GLY 1800.0091
ASP 1810.0095
TYR 1820.0108
ASP 1830.0136
ALA 1840.0147
TRP 1850.0105
GLY 1860.0108
VAL 1870.0074
GLU 1880.0066
GLY 1890.0081
TRP 1900.0081
SER 1910.0124
SER 1920.0122
GLU 1930.0132
ASP 1940.0100
VAL 1950.0071
LEU 1960.0072
SER 1970.0062
TRP 1980.0041
PHE 1990.0028
VAL 2000.0014
GLN 2010.0022
ALA 2020.0011
GLU 2030.0026
THR 2040.0023
ASN 2050.0033
ALA 2060.0069
ASP 2070.0079
PHE 2080.0087
GLY 2090.0105
PRO 2100.0098
GLY 2110.0101
ALA 2120.0066
TYR 2130.0047
HISH 2140.0053
GLY 2150.0025
SER 2160.0019
GLY 2170.0013
GLY 2180.0020
PRO 2190.0026
MET 2200.0029
ARG 2210.0043
VAL 2220.0027
GLU 2230.0022
ASN 2240.0033
PRO 2250.0022
ARG 2260.0050
TYR 2270.0026
THR 2280.0031
ASN 2290.0034
LYS 2300.0032
GLN 2310.0035
LEU 2320.0031
HISE 2330.0044
THR 2340.0055
ALA 2350.0048
PHE 2360.0058
PHE 2370.0081
LYS 2380.0082
ALA 2390.0088
ALA 2400.0101
GLU 2410.0123
GLU 2420.0120
VAL 2430.0106
GLY 2440.0122
LEU 2450.0098
THR 2460.0116
PRO 2470.0124
ASN 2480.0101
SER 2490.0108
ASP 2500.0109
PHE 2510.0082
ASN 2520.0087
ASP 2530.0096
TRP 2540.0093
SER 2550.0112
HISE 2560.0088
ASP 2570.0110
HISE 2580.0083
ALA 2590.0071
GLY 2600.0093
TYR 2610.0088
GLY 2620.0095
THR 2630.0023
PHE 2640.0023
GLN 2650.0019
VAL 2660.0029
MET 2670.0043
GLN 2680.0049
ASP 2690.0061
LYS 2700.0094
GLY 2710.0052
THR 2720.0041
ARG 2730.0054
ALA 2740.0058
ASP 2750.0029
MET 2760.0015
TYR 2770.0026
ARG 2780.0033
GLN 2790.0015
TYR 2800.0022
LEU 2810.0055
LYS 2820.0102
PRO 2830.0133
VAL 2840.0111
LEU 2850.0084
GLY 2860.0084
ARG 2870.0131
ARG 2880.0195
ASN 2890.0161
LEU 2900.0044
GLN 2910.0052
VAL 2920.0064
LEU 2930.0057
THR 2940.0060
GLY 2950.0074
ALA 2960.0043
ALA 2970.0030
VAL 2980.0033
THR 2990.0051
LYS 3000.0034
VAL 3010.0023
ASN 3020.0092
ILE 3030.0112
ASP 3040.0204
GLN 3050.0204
ALA 3060.0368
ALA 3070.0548
GLY 3080.0335
LYS 3090.0198
ALA 3100.0148
GLN 3110.0149
ALA 3120.0085
LEU 3130.0129
GLY 3140.0032
VAL 3150.0033
GLU 3160.0034
PHE 3170.0050
SER 3180.0036
THR 3190.0049
ASP 3200.0205
GLY 3210.0193
PRO 3220.0154
THR 3230.0292
GLY 3240.0226
GLU 3250.0213
ARG 3260.0053
LEU 3270.0071
SER 3280.0081
ALA 3290.0057
GLU 3300.0050
LEU 3310.0052
ALA 3320.0066
PRO 3330.0249
GLY 3340.0268
GLY 3350.0059
GLU 3360.0046
VAL 3370.0030
ILE 3380.0025
MET 3390.0017
CYS 3400.0034
ALA 3410.0022
GLY 3420.0032
ALA 3430.0046
VAL 3440.0038
HISD 3450.0039
THR 3460.0039
PRO 3470.0057
PHE 3480.0047
LEU 3490.0053
LEU 3500.0079
LYS 3510.0063
HISE 3520.0078
SER 3530.0126
GLY 3540.0145
VAL 3550.0152
GLY 3560.0174
PRO 3570.0239
SER 3580.0234
ALA 3590.0152
GLU 3600.0186
LEU 3610.0106
LYS 3620.0252
GLU 3630.0457
PHE 3640.0488
GLY 3650.0394
ILE 3660.0337
PRO 3670.0393
VAL 3680.0279
VAL 3690.0266
SER 3700.0265
ASN 3710.0295
LEU 3720.0250
ALA 3730.0296
GLY 3740.0186
VAL 3750.0137
GLY 3760.0117
GLN 3770.0106
ASN 3780.0098
LEU 3790.0091
GLN 3800.0059
ASP 3810.0064
GLN 3820.0059
PRO 3830.0049
ALA 3840.0046
CYS 3850.0041
LEU 3860.0029
THR 3870.0027
ALA 3880.0028
ALA 3890.0053
PRO 3900.0055
VAL 3910.0061
LYS 3920.0083
GLU 3930.0069
LYS 3940.0087
TYR 3950.0063
ASP 3960.0059
GLY 3970.0055
ILE 3980.0042
ALA 3990.0037
ILE 4000.0026
SER 4010.0027
ASP 4020.0028
HISE 4030.0018
ILE 4040.0016
TYR 4050.0007
ASN 4060.0007
GLU 4070.0058
LYS 4080.0073
GLY 4090.0046
GLN 4100.0038
ILE 4110.0041
ARG 4120.0040
LYS 4130.0051
ARG 4140.0118
ALA 4150.0131
ILE 4160.0089
ALA 4170.0083
SER 4180.0088
TYR 4190.0040
LEU 4200.0035
LEU 4210.0081
GLY 4220.0149
GLY 4230.0092
ARG 4240.0064
GLY 4250.0051
GLY 4260.0054
LEU 4270.0043
THR 4280.0021
SER 4290.0023
THR 4300.0026
GLY 4310.0005
CYS 4320.0003
ASP 4330.0004
ARG 4340.0031
GLY 4350.0041
ALA 4360.0053
PHE 4370.0044
VAL 4380.0054
ARG 4390.0065
THR 4400.0066
ALA 4410.0082
GLY 4420.0070
GLN 4430.0162
ALA 4440.0104
LEU 4450.0039
PRO 4460.0032
ASP 4470.0033
LEU 4480.0035
GLN 4490.0006
VAL 4500.0007
ARG 4510.0006
PHE 4520.0030
VAL 4530.0030
PRO 4540.0027
GLY 4550.0037
MET 4560.0033
ALA 4570.0028
LEU 4580.0025
ASP 4590.0033
PRO 4600.0034
ASP 4610.0049
GLY 4620.0060
VAL 4630.0072
SER 4640.0061
THR 4650.0051
TYR 4660.0063
VAL 4670.0069
ARG 4680.0046
PHE 4690.0041
ALA 4700.0055
LYS 4710.0048
PHE 4720.0024
GLN 4730.0020
SER 4740.0027
GLN 4750.0045
GLY 4760.0037
LEU 4770.0034
LYS 4780.0034
TRP 4790.0024
PRO 4800.0030
SER 4810.0043
GLY 4820.0037
ILE 4830.0035
THR 4840.0030
MET 4850.0012
GLN 4860.0012
LEU 4870.0020
ILE 4880.0042
ALA 4890.0039
CYS 4900.0032
ARG 4910.0034
PRO 4920.0047
GLN 4930.0046
SER 4940.0050
THR 4950.0057
GLY 4960.0079
SER 4970.0078
VAL 4980.0060
GLY 4990.0048
LEU 5000.0090
LYS 5010.0138
SER 5020.0165
ALA 5030.0254
ASP 5040.0192
PRO 5050.0138
PHE 5060.0059
ALA 5070.0060
PRO 5080.0045
PRO 5090.0059
LYS 5100.0058
LEU 5110.0037
SER 5120.0047
PRO 5130.0042
GLY 5140.0034
TYR 5150.0053
LEU 5160.0052
THR 5170.0054
ASP 5180.0085
LYS 5190.0050
ASP 5200.0030
GLY 5210.0060
ALA 5220.0064
ASP 5230.0063
LEU 5240.0036
ALA 5250.0044
THR 5260.0055
LEU 5270.0033
ARG 5280.0024
LYS 5290.0046
GLY 5300.0027
ILE 5310.0010
HISE 5320.0032
TRP 5330.0027
ALA 5340.0030
ARG 5350.0031
ASP 5360.0041
VAL 5370.0050
ALA 5380.0040
ARG 5390.0056
SER 5400.0074
SER 5410.0083
ALA 5420.0057
LEU 5430.0049
SER 5440.0040
GLU 5450.0040
TYR 5460.0043
LEU 5470.0049
ASP 5480.0075
GLY 5490.0078
GLU 5500.0060
LEU 5510.0053
PHE 5520.0045
PRO 5530.0046
GLY 5540.0166
SER 5550.0339
GLY 5560.0197
VAL 5570.0126
VAL 5580.0279
SER 5590.0137
ASP 5600.0327
ASP 5610.0308
GLN 5620.0107
ILE 5630.0053
ASP 5640.0081
GLU 5650.0101
TYR 5660.0038
ILE 5670.0028
ARG 5680.0042
ARG 5690.0045
SER 5700.0041
ILE 5710.0053
HISD 5720.0054
SER 5730.0056
SER 5740.0057
ASN 5750.0064
ALA 5760.0053
ILE 5770.0052
THR 5780.0066
GLY 5790.0068
THR 5800.0074
CYS 5810.0078
LYS 5820.0073
MET 5830.0066
GLY 5840.0039
ASN 5850.0165
ALA 5860.0397
GLY 5870.0585
ASP 5880.0288
SER 5890.0173
SER 5900.0161
SER 5910.0122
VAL 5920.0107
VAL 5930.0063
ASP 5940.0061
ASN 5950.0060
GLN 5960.0039
LEU 5970.0032
ARG 5980.0047
VAL 5990.0025
HISE 6000.0061
GLY 6010.0085
VAL 6020.0064
GLU 6030.0097
GLY 6040.0084
LEU 6050.0025
ARG 6060.0007
VAL 6070.0014
VAL 6080.0011
ASP 6090.0020
ALA 6100.0034
SER 6110.0050
VAL 6120.0050
VAL 6130.0056
PRO 6140.0070
LYS 6150.0072
ILE 6160.0063
PRO 6170.0048
GLY 6180.0037
GLY 6190.0033
GLN 6200.0027
THR 6210.0022
GLY 6220.0018
ALA 6230.0027
PRO 6240.0028
VAL 6250.0022
VAL 6260.0013
MET 6270.0016
ILE 6280.0026
ALA 6290.0019
GLU 6300.0021
ARG 6310.0037
ALA 6320.0033
ALA 6330.0022
ALA 6340.0035
LEU 6350.0037
LEU 6360.0015
THR 6370.0026
GLY 6380.0048
LYS 6390.0087
ALA 6400.0096
THR 6410.0079
ILE 6420.0078
GLY 6430.0095
ALA 6440.0021
SER 6450.0024
ALA 6460.0018
ALA 6470.0014
ALA 6480.0029
PRO 6490.0037

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.