CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 65  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0587
SER 770.0167
PRO 780.0119
VAL 790.0076
ALA 800.0086
GLY 810.0131
GLN 820.0125
LYS 830.0111
TYR 840.0071
ASP 850.0074
TYR 860.0046
ILE 870.0038
LEU 880.0044
VAL 890.0027
GLY 900.0014
GLY 910.0043
GLY 920.0041
THR 930.0054
ALA 940.0058
ALA 950.0067
CYS 960.0073
VAL 970.0084
LEU 980.0104
ALA 990.0096
ASN 1000.0136
ARG 1010.0096
LEU 1020.0093
SER 1030.0101
ALA 1040.0135
ASP 1050.0075
GLY 1060.0019
SER 1070.0013
LYS 1080.0031
ARG 1090.0041
VAL 1100.0073
LEU 1110.0055
VAL 1120.0054
LEU 1130.0009
GLU 1140.0027
ALA 1150.0060
GLY 1160.0090
PRO 1170.0142
ASP 1180.0176
ASN 1190.0153
THR 1200.0175
SER 1210.0120
ARG 1220.0068
ASP 1230.0070
VAL 1240.0077
LYS 1250.0047
ILE 1260.0050
PRO 1270.0052
ALA 1280.0052
ALA 1290.0061
ILE 1300.0074
THR 1310.0059
ARG 1320.0058
LEU 1330.0074
PHE 1340.0047
ARG 1350.0053
SER 1360.0085
PRO 1370.0112
LEU 1380.0103
ASP 1390.0069
TRP 1400.0059
ASN 1410.0057
LEU 1420.0042
PHE 1430.0055
SER 1440.0045
GLU 1450.0051
LEU 1460.0110
GLN 1470.0053
GLU 1480.0103
GLN 1490.0049
LEU 1500.0041
ALA 1510.0035
GLU 1520.0087
ARG 1530.0072
GLN 1540.0079
ILE 1550.0043
TYR 1560.0046
MET 1570.0047
ALA 1580.0045
ARG 1590.0054
GLY 1600.0069
ARG 1610.0065
LEU 1620.0092
LEU 1630.0102
GLY 1640.0092
GLY 1650.0082
SER 1660.0079
SER 1670.0092
ALA 1680.0092
THR 1690.0086
ASN 1700.0076
ALA 1710.0057
THR 1720.0059
LEU 1730.0099
TYR 1740.0086
HISD 1750.0082
ARG 1760.0120
GLY 1770.0102
ALA 1780.0093
ALA 1790.0103
GLY 1800.0071
ASP 1810.0059
TYR 1820.0072
ASP 1830.0081
ALA 1840.0066
TRP 1850.0059
GLY 1860.0079
VAL 1870.0079
GLU 1880.0093
GLY 1890.0087
TRP 1900.0071
SER 1910.0096
SER 1920.0115
GLU 1930.0150
ASP 1940.0107
VAL 1950.0112
LEU 1960.0130
SER 1970.0117
TRP 1980.0109
PHE 1990.0121
VAL 2000.0109
GLN 2010.0109
ALA 2020.0109
GLU 2030.0116
THR 2040.0084
ASN 2050.0056
ALA 2060.0111
ASP 2070.0092
PHE 2080.0149
GLY 2090.0166
PRO 2100.0162
GLY 2110.0254
ALA 2120.0241
TYR 2130.0204
HISH 2140.0114
GLY 2150.0105
SER 2160.0092
GLY 2170.0097
GLY 2180.0057
PRO 2190.0041
MET 2200.0067
ARG 2210.0134
VAL 2220.0154
GLU 2230.0184
ASN 2240.0131
PRO 2250.0114
ARG 2260.0124
TYR 2270.0033
THR 2280.0034
ASN 2290.0044
LYS 2300.0268
GLN 2310.0132
LEU 2320.0045
HISE 2330.0042
THR 2340.0065
ALA 2350.0031
PHE 2360.0026
PHE 2370.0045
LYS 2380.0040
ALA 2390.0022
ALA 2400.0041
GLU 2410.0061
GLU 2420.0065
VAL 2430.0040
GLY 2440.0066
LEU 2450.0059
THR 2460.0064
PRO 2470.0083
ASN 2480.0058
SER 2490.0060
ASP 2500.0027
PHE 2510.0069
ASN 2520.0099
ASP 2530.0123
TRP 2540.0144
SER 2550.0174
HISE 2560.0156
ASP 2570.0052
HISE 2580.0043
ALA 2590.0049
GLY 2600.0066
TYR 2610.0085
GLY 2620.0108
THR 2630.0109
PHE 2640.0105
GLN 2650.0108
VAL 2660.0106
MET 2670.0079
GLN 2680.0087
ASP 2690.0242
LYS 2700.0444
GLY 2710.0098
THR 2720.0092
ARG 2730.0043
ALA 2740.0040
ASP 2750.0073
MET 2760.0090
TYR 2770.0091
ARG 2780.0120
GLN 2790.0078
TYR 2800.0110
LEU 2810.0168
LYS 2820.0199
PRO 2830.0270
VAL 2840.0226
LEU 2850.0201
GLY 2860.0188
ARG 2870.0232
ARG 2880.0249
ASN 2890.0084
LEU 2900.0131
GLN 2910.0098
VAL 2920.0084
LEU 2930.0046
THR 2940.0071
GLY 2950.0103
ALA 2960.0085
ALA 2970.0091
VAL 2980.0094
THR 2990.0090
LYS 3000.0085
VAL 3010.0078
ASN 3020.0087
ILE 3030.0091
ASP 3040.0145
GLN 3050.0148
ALA 3060.0133
ALA 3070.0199
GLY 3080.0114
LYS 3090.0091
ALA 3100.0014
GLN 3110.0126
ALA 3120.0102
LEU 3130.0150
GLY 3140.0081
VAL 3150.0068
GLU 3160.0082
PHE 3170.0106
SER 3180.0105
THR 3190.0109
ASP 3200.0214
GLY 3210.0216
PRO 3220.0157
THR 3230.0306
GLY 3240.0290
GLU 3250.0171
ARG 3260.0089
LEU 3270.0088
SER 3280.0087
ALA 3290.0033
GLU 3300.0040
LEU 3310.0052
ALA 3320.0200
PRO 3330.0587
GLY 3340.0525
GLY 3350.0033
GLU 3360.0046
VAL 3370.0050
ILE 3380.0036
MET 3390.0034
CYS 3400.0023
ALA 3410.0013
GLY 3420.0008
ALA 3430.0013
VAL 3440.0012
HISD 3450.0026
THR 3460.0024
PRO 3470.0045
PHE 3480.0050
LEU 3490.0057
LEU 3500.0047
LYS 3510.0050
HISE 3520.0050
SER 3530.0031
GLY 3540.0040
VAL 3550.0058
GLY 3560.0077
PRO 3570.0092
SER 3580.0103
ALA 3590.0095
GLU 3600.0068
LEU 3610.0081
LYS 3620.0143
GLU 3630.0147
PHE 3640.0161
GLY 3650.0133
ILE 3660.0112
PRO 3670.0136
VAL 3680.0097
VAL 3690.0085
SER 3700.0105
ASN 3710.0088
LEU 3720.0084
ALA 3730.0092
GLY 3740.0061
VAL 3750.0050
GLY 3760.0037
GLN 3770.0014
ASN 3780.0009
LEU 3790.0009
GLN 3800.0035
ASP 3810.0039
GLN 3820.0042
PRO 3830.0052
ALA 3840.0040
CYS 3850.0029
LEU 3860.0047
THR 3870.0050
ALA 3880.0064
ALA 3890.0080
PRO 3900.0066
VAL 3910.0059
LYS 3920.0057
GLU 3930.0118
LYS 3940.0123
TYR 3950.0069
ASP 3960.0077
GLY 3970.0087
ILE 3980.0037
ALA 3990.0035
ILE 4000.0030
SER 4010.0055
ASP 4020.0056
HISE 4030.0055
ILE 4040.0067
TYR 4050.0038
ASN 4060.0041
GLU 4070.0070
LYS 4080.0107
GLY 4090.0033
GLN 4100.0046
ILE 4110.0061
ARG 4120.0074
LYS 4130.0075
ARG 4140.0033
ALA 4150.0043
ILE 4160.0066
ALA 4170.0056
SER 4180.0056
TYR 4190.0028
LEU 4200.0080
LEU 4210.0121
GLY 4220.0055
GLY 4230.0024
ARG 4240.0016
GLY 4250.0010
GLY 4260.0018
LEU 4270.0021
THR 4280.0023
SER 4290.0025
THR 4300.0043
GLY 4310.0057
CYS 4320.0073
ASP 4330.0081
ARG 4340.0074
GLY 4350.0075
ALA 4360.0071
PHE 4370.0067
VAL 4380.0070
ARG 4390.0066
THR 4400.0123
ALA 4410.0132
GLY 4420.0101
GLN 4430.0125
ALA 4440.0074
LEU 4450.0043
PRO 4460.0051
ASP 4470.0055
LEU 4480.0046
GLN 4490.0047
VAL 4500.0049
ARG 4510.0047
PHE 4520.0031
VAL 4530.0026
PRO 4540.0015
GLY 4550.0069
MET 4560.0074
ALA 4570.0073
LEU 4580.0101
ASP 4590.0087
PRO 4600.0064
ASP 4610.0054
GLY 4620.0038
VAL 4630.0034
SER 4640.0069
THR 4650.0085
TYR 4660.0059
VAL 4670.0069
ARG 4680.0093
PHE 4690.0093
ALA 4700.0082
LYS 4710.0084
PHE 4720.0091
GLN 4730.0063
SER 4740.0079
GLN 4750.0078
GLY 4760.0048
LEU 4770.0059
LYS 4780.0042
TRP 4790.0089
PRO 4800.0079
SER 4810.0080
GLY 4820.0057
ILE 4830.0054
THR 4840.0054
MET 4850.0033
GLN 4860.0028
LEU 4870.0028
ILE 4880.0027
ALA 4890.0038
CYS 4900.0035
ARG 4910.0037
PRO 4920.0063
GLN 4930.0092
SER 4940.0055
THR 4950.0039
GLY 4960.0037
SER 4970.0026
VAL 4980.0025
GLY 4990.0037
LEU 5000.0060
LYS 5010.0072
SER 5020.0079
ALA 5030.0102
ASP 5040.0059
PRO 5050.0092
PHE 5060.0088
ALA 5070.0060
PRO 5080.0053
PRO 5090.0052
LYS 5100.0050
LEU 5110.0029
SER 5120.0014
PRO 5130.0029
GLY 5140.0042
TYR 5150.0056
LEU 5160.0054
THR 5170.0061
ASP 5180.0079
LYS 5190.0084
ASP 5200.0206
GLY 5210.0113
ALA 5220.0110
ASP 5230.0078
LEU 5240.0058
ALA 5250.0070
THR 5260.0060
LEU 5270.0045
ARG 5280.0056
LYS 5290.0077
GLY 5300.0044
ILE 5310.0037
HISE 5320.0069
TRP 5330.0056
ALA 5340.0044
ARG 5350.0051
ASP 5360.0037
VAL 5370.0029
ALA 5380.0046
ARG 5390.0051
SER 5400.0036
SER 5410.0046
ALA 5420.0031
LEU 5430.0034
SER 5440.0061
GLU 5450.0066
TYR 5460.0061
LEU 5470.0073
ASP 5480.0081
GLY 5490.0085
GLU 5500.0086
LEU 5510.0067
PHE 5520.0059
PRO 5530.0048
GLY 5540.0106
SER 5550.0310
GLY 5560.0227
VAL 5570.0049
VAL 5580.0113
SER 5590.0082
ASP 5600.0140
ASP 5610.0117
GLN 5620.0043
ILE 5630.0024
ASP 5640.0062
GLU 5650.0073
TYR 5660.0038
ILE 5670.0039
ARG 5680.0048
ARG 5690.0071
SER 5700.0056
ILE 5710.0059
HISD 5720.0042
SER 5730.0046
SER 5740.0039
ASN 5750.0038
ALA 5760.0039
ILE 5770.0030
THR 5780.0019
GLY 5790.0013
THR 5800.0016
CYS 5810.0019
LYS 5820.0026
MET 5830.0029
GLY 5840.0056
ASN 5850.0063
ALA 5860.0015
GLY 5870.0298
ASP 5880.0176
SER 5890.0108
SER 5900.0075
SER 5910.0057
VAL 5920.0036
VAL 5930.0029
ASP 5940.0045
ASN 5950.0060
GLN 5960.0052
LEU 5970.0044
ARG 5980.0049
VAL 5990.0032
HISE 6000.0053
GLY 6010.0066
VAL 6020.0065
GLU 6030.0119
GLY 6040.0116
LEU 6050.0044
ARG 6060.0037
VAL 6070.0028
VAL 6080.0049
ASP 6090.0035
ALA 6100.0030
SER 6110.0025
VAL 6120.0024
VAL 6130.0024
PRO 6140.0018
LYS 6150.0019
ILE 6160.0025
PRO 6170.0039
GLY 6180.0022
GLY 6190.0023
GLN 6200.0037
THR 6210.0039
GLY 6220.0036
ALA 6230.0064
PRO 6240.0053
VAL 6250.0053
VAL 6260.0052
MET 6270.0050
ILE 6280.0048
ALA 6290.0058
GLU 6300.0053
ARG 6310.0039
ALA 6320.0060
ALA 6330.0063
ALA 6340.0056
LEU 6350.0046
LEU 6360.0052
THR 6370.0058
GLY 6380.0045
LYS 6390.0043
ALA 6400.0033
THR 6410.0085
ILE 6420.0080
GLY 6430.0082
ALA 6440.0032
SER 6450.0023
ALA 6460.0031
ALA 6470.0034
ALA 6480.0045
PRO 6490.0057

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.