CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 69  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0456
SER 770.0095
PRO 780.0049
VAL 790.0075
ALA 800.0165
GLY 810.0227
GLN 820.0157
LYS 830.0133
TYR 840.0089
ASP 850.0101
TYR 860.0084
ILE 870.0080
LEU 880.0088
VAL 890.0025
GLY 900.0025
GLY 910.0033
GLY 920.0046
THR 930.0052
ALA 940.0062
ALA 950.0037
CYS 960.0024
VAL 970.0057
LEU 980.0085
ALA 990.0073
ASN 1000.0091
ARG 1010.0104
LEU 1020.0105
SER 1030.0107
ALA 1040.0153
ASP 1050.0136
GLY 1060.0086
SER 1070.0045
LYS 1080.0071
ARG 1090.0035
VAL 1100.0091
LEU 1110.0073
VAL 1120.0071
LEU 1130.0052
GLU 1140.0055
ALA 1150.0062
GLY 1160.0102
PRO 1170.0124
ASP 1180.0117
ASN 1190.0133
THR 1200.0146
SER 1210.0170
ARG 1220.0232
ASP 1230.0159
VAL 1240.0165
LYS 1250.0169
ILE 1260.0135
PRO 1270.0123
ALA 1280.0062
ALA 1290.0069
ILE 1300.0083
THR 1310.0060
ARG 1320.0058
LEU 1330.0106
PHE 1340.0095
ARG 1350.0092
SER 1360.0113
PRO 1370.0131
LEU 1380.0127
ASP 1390.0113
TRP 1400.0059
ASN 1410.0067
LEU 1420.0033
PHE 1430.0073
SER 1440.0063
GLU 1450.0072
LEU 1460.0115
GLN 1470.0102
GLU 1480.0098
GLN 1490.0083
LEU 1500.0078
ALA 1510.0075
GLU 1520.0088
ARG 1530.0090
GLN 1540.0101
ILE 1550.0060
TYR 1560.0065
MET 1570.0050
ALA 1580.0077
ARG 1590.0081
GLY 1600.0097
ARG 1610.0104
LEU 1620.0096
LEU 1630.0069
GLY 1640.0098
GLY 1650.0109
SER 1660.0138
SER 1670.0143
ALA 1680.0144
THR 1690.0159
ASN 1700.0128
ALA 1710.0104
THR 1720.0108
LEU 1730.0055
TYR 1740.0059
HISD 1750.0055
ARG 1760.0089
GLY 1770.0084
ALA 1780.0088
ALA 1790.0126
GLY 1800.0114
ASP 1810.0094
TYR 1820.0085
ASP 1830.0103
ALA 1840.0110
TRP 1850.0087
GLY 1860.0097
VAL 1870.0070
GLU 1880.0104
GLY 1890.0076
TRP 1900.0061
SER 1910.0080
SER 1920.0105
GLU 1930.0090
ASP 1940.0029
VAL 1950.0044
LEU 1960.0062
SER 1970.0042
TRP 1980.0059
PHE 1990.0075
VAL 2000.0071
GLN 2010.0080
ALA 2020.0094
GLU 2030.0068
THR 2040.0022
ASN 2050.0068
ALA 2060.0131
ASP 2070.0181
PHE 2080.0181
GLY 2090.0149
PRO 2100.0081
GLY 2110.0096
ALA 2120.0126
TYR 2130.0123
HISH 2140.0077
GLY 2150.0046
SER 2160.0048
GLY 2170.0051
GLY 2180.0060
PRO 2190.0050
MET 2200.0059
ARG 2210.0096
VAL 2220.0096
GLU 2230.0096
ASN 2240.0097
PRO 2250.0056
ARG 2260.0107
TYR 2270.0062
THR 2280.0062
ASN 2290.0066
LYS 2300.0172
GLN 2310.0064
LEU 2320.0056
HISE 2330.0027
THR 2340.0023
ALA 2350.0029
PHE 2360.0024
PHE 2370.0033
LYS 2380.0045
ALA 2390.0060
ALA 2400.0048
GLU 2410.0068
GLU 2420.0087
VAL 2430.0076
GLY 2440.0064
LEU 2450.0036
THR 2460.0032
PRO 2470.0044
ASN 2480.0046
SER 2490.0058
ASP 2500.0062
PHE 2510.0054
ASN 2520.0078
ASP 2530.0079
TRP 2540.0093
SER 2550.0091
HISE 2560.0086
ASP 2570.0082
HISE 2580.0065
ALA 2590.0043
GLY 2600.0032
TYR 2610.0037
GLY 2620.0048
THR 2630.0017
PHE 2640.0037
GLN 2650.0064
VAL 2660.0087
MET 2670.0097
GLN 2680.0098
ASP 2690.0127
LYS 2700.0174
GLY 2710.0115
THR 2720.0134
ARG 2730.0139
ALA 2740.0127
ASP 2750.0082
MET 2760.0054
TYR 2770.0046
ARG 2780.0076
GLN 2790.0049
TYR 2800.0052
LEU 2810.0082
LYS 2820.0117
PRO 2830.0184
VAL 2840.0154
LEU 2850.0123
GLY 2860.0115
ARG 2870.0213
ARG 2880.0232
ASN 2890.0113
LEU 2900.0116
GLN 2910.0073
VAL 2920.0053
LEU 2930.0083
THR 2940.0086
GLY 2950.0088
ALA 2960.0074
ALA 2970.0046
VAL 2980.0027
THR 2990.0034
LYS 3000.0026
VAL 3010.0015
ASN 3020.0036
ILE 3030.0046
ASP 3040.0087
GLN 3050.0086
ALA 3060.0056
ALA 3070.0130
GLY 3080.0174
LYS 3090.0082
ALA 3100.0022
GLN 3110.0064
ALA 3120.0070
LEU 3130.0106
GLY 3140.0072
VAL 3150.0055
GLU 3160.0037
PHE 3170.0060
SER 3180.0057
THR 3190.0079
ASP 3200.0080
GLY 3210.0079
PRO 3220.0074
THR 3230.0098
GLY 3240.0102
GLU 3250.0113
ARG 3260.0040
LEU 3270.0067
SER 3280.0088
ALA 3290.0116
GLU 3300.0136
LEU 3310.0133
ALA 3320.0218
PRO 3330.0456
GLY 3340.0246
GLY 3350.0117
GLU 3360.0104
VAL 3370.0082
ILE 3380.0046
MET 3390.0028
CYS 3400.0011
ALA 3410.0031
GLY 3420.0040
ALA 3430.0052
VAL 3440.0054
HISD 3450.0046
THR 3460.0052
PRO 3470.0069
PHE 3480.0071
LEU 3490.0062
LEU 3500.0078
LYS 3510.0081
HISE 3520.0093
SER 3530.0085
GLY 3540.0079
VAL 3550.0073
GLY 3560.0075
PRO 3570.0033
SER 3580.0056
ALA 3590.0130
GLU 3600.0066
LEU 3610.0063
LYS 3620.0155
GLU 3630.0112
PHE 3640.0100
GLY 3650.0168
ILE 3660.0164
PRO 3670.0191
VAL 3680.0075
VAL 3690.0070
SER 3700.0053
ASN 3710.0063
LEU 3720.0064
ALA 3730.0058
GLY 3740.0077
VAL 3750.0074
GLY 3760.0074
GLN 3770.0065
ASN 3780.0063
LEU 3790.0052
GLN 3800.0013
ASP 3810.0011
GLN 3820.0016
PRO 3830.0050
ALA 3840.0040
CYS 3850.0035
LEU 3860.0020
THR 3870.0030
ALA 3880.0027
ALA 3890.0069
PRO 3900.0068
VAL 3910.0091
LYS 3920.0174
GLU 3930.0170
LYS 3940.0161
TYR 3950.0122
ASP 3960.0092
GLY 3970.0072
ILE 3980.0072
ALA 3990.0069
ILE 4000.0069
SER 4010.0082
ASP 4020.0058
HISE 4030.0075
ILE 4040.0123
TYR 4050.0099
ASN 4060.0096
GLU 4070.0045
LYS 4080.0158
GLY 4090.0116
GLN 4100.0140
ILE 4110.0159
ARG 4120.0150
LYS 4130.0185
ARG 4140.0264
ALA 4150.0089
ILE 4160.0107
ALA 4170.0113
SER 4180.0073
TYR 4190.0063
LEU 4200.0086
LEU 4210.0161
GLY 4220.0311
GLY 4230.0199
ARG 4240.0126
GLY 4250.0076
GLY 4260.0068
LEU 4270.0045
THR 4280.0038
SER 4290.0023
THR 4300.0038
GLY 4310.0019
CYS 4320.0022
ASP 4330.0022
ARG 4340.0020
GLY 4350.0029
ALA 4360.0040
PHE 4370.0040
VAL 4380.0044
ARG 4390.0048
THR 4400.0093
ALA 4410.0100
GLY 4420.0086
GLN 4430.0191
ALA 4440.0130
LEU 4450.0089
PRO 4460.0054
ASP 4470.0058
LEU 4480.0057
GLN 4490.0040
VAL 4500.0034
ARG 4510.0027
PHE 4520.0017
VAL 4530.0029
PRO 4540.0042
GLY 4550.0068
MET 4560.0055
ALA 4570.0041
LEU 4580.0056
ASP 4590.0052
PRO 4600.0050
ASP 4610.0041
GLY 4620.0042
VAL 4630.0042
SER 4640.0054
THR 4650.0056
TYR 4660.0047
VAL 4670.0076
ARG 4680.0094
PHE 4690.0099
ALA 4700.0116
LYS 4710.0104
PHE 4720.0078
GLN 4730.0124
SER 4740.0170
GLN 4750.0143
GLY 4760.0149
LEU 4770.0068
LYS 4780.0020
TRP 4790.0054
PRO 4800.0066
SER 4810.0084
GLY 4820.0057
ILE 4830.0053
THR 4840.0046
MET 4850.0016
GLN 4860.0019
LEU 4870.0028
ILE 4880.0037
ALA 4890.0050
CYS 4900.0043
ARG 4910.0056
PRO 4920.0052
GLN 4930.0082
SER 4940.0058
THR 4950.0029
GLY 4960.0010
SER 4970.0072
VAL 4980.0070
GLY 4990.0072
LEU 5000.0121
LYS 5010.0131
SER 5020.0132
ALA 5030.0150
ASP 5040.0118
PRO 5050.0080
PHE 5060.0074
ALA 5070.0072
PRO 5080.0070
PRO 5090.0077
LYS 5100.0089
LEU 5110.0072
SER 5120.0039
PRO 5130.0042
GLY 5140.0039
TYR 5150.0071
LEU 5160.0083
THR 5170.0102
ASP 5180.0181
LYS 5190.0089
ASP 5200.0117
GLY 5210.0132
ALA 5220.0131
ASP 5230.0104
LEU 5240.0087
ALA 5250.0100
THR 5260.0106
LEU 5270.0078
ARG 5280.0078
LYS 5290.0092
GLY 5300.0071
ILE 5310.0061
HISE 5320.0079
TRP 5330.0048
ALA 5340.0037
ARG 5350.0042
ASP 5360.0055
VAL 5370.0052
ALA 5380.0048
ARG 5390.0073
SER 5400.0097
SER 5410.0100
ALA 5420.0087
LEU 5430.0080
SER 5440.0098
GLU 5450.0131
TYR 5460.0109
LEU 5470.0106
ASP 5480.0062
GLY 5490.0051
GLU 5500.0060
LEU 5510.0059
PHE 5520.0056
PRO 5530.0072
GLY 5540.0075
SER 5550.0093
GLY 5560.0145
VAL 5570.0097
VAL 5580.0089
SER 5590.0063
ASP 5600.0062
ASP 5610.0069
GLN 5620.0059
ILE 5630.0052
ASP 5640.0047
GLU 5650.0028
TYR 5660.0031
ILE 5670.0048
ARG 5680.0043
ARG 5690.0029
SER 5700.0041
ILE 5710.0056
HISD 5720.0036
SER 5730.0029
SER 5740.0030
ASN 5750.0044
ALA 5760.0044
ILE 5770.0036
THR 5780.0049
GLY 5790.0052
THR 5800.0054
CYS 5810.0059
LYS 5820.0045
MET 5830.0021
GLY 5840.0033
ASN 5850.0141
ALA 5860.0203
GLY 5870.0100
ASP 5880.0066
SER 5890.0130
SER 5900.0092
SER 5910.0058
VAL 5920.0053
VAL 5930.0041
ASP 5940.0038
ASN 5950.0039
GLN 5960.0056
LEU 5970.0048
ARG 5980.0068
VAL 5990.0028
HISE 6000.0016
GLY 6010.0014
VAL 6020.0019
GLU 6030.0058
GLY 6040.0077
LEU 6050.0049
ARG 6060.0037
VAL 6070.0024
VAL 6080.0040
ASP 6090.0039
ALA 6100.0045
SER 6110.0051
VAL 6120.0033
VAL 6130.0034
PRO 6140.0040
LYS 6150.0037
ILE 6160.0039
PRO 6170.0046
GLY 6180.0031
GLY 6190.0038
GLN 6200.0042
THR 6210.0048
GLY 6220.0053
ALA 6230.0059
PRO 6240.0053
VAL 6250.0064
VAL 6260.0066
MET 6270.0056
ILE 6280.0057
ALA 6290.0078
GLU 6300.0070
ARG 6310.0057
ALA 6320.0090
ALA 6330.0094
ALA 6340.0091
LEU 6350.0085
LEU 6360.0091
THR 6370.0095
GLY 6380.0081
LYS 6390.0102
ALA 6400.0075
THR 6410.0128
ILE 6420.0093
GLY 6430.0114
ALA 6440.0096
SER 6450.0030
ALA 6460.0055
ALA 6470.0046
ALA 6480.0051
PRO 6490.0063

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.