CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 77  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0386
SER 770.0184
PRO 780.0073
VAL 790.0064
ALA 800.0209
GLY 810.0273
GLN 820.0191
LYS 830.0096
TYR 840.0028
ASP 850.0010
TYR 860.0028
ILE 870.0026
LEU 880.0028
VAL 890.0042
GLY 900.0048
GLY 910.0057
GLY 920.0055
THR 930.0058
ALA 940.0060
ALA 950.0035
CYS 960.0034
VAL 970.0049
LEU 980.0043
ALA 990.0029
ASN 1000.0028
ARG 1010.0030
LEU 1020.0027
SER 1030.0031
ALA 1040.0031
ASP 1050.0030
GLY 1060.0023
SER 1070.0055
LYS 1080.0035
ARG 1090.0032
VAL 1100.0027
LEU 1110.0031
VAL 1120.0043
LEU 1130.0068
GLU 1140.0090
ALA 1150.0117
GLY 1160.0139
PRO 1170.0122
ASP 1180.0093
ASN 1190.0103
THR 1200.0155
SER 1210.0149
ARG 1220.0284
ASP 1230.0220
VAL 1240.0062
LYS 1250.0102
ILE 1260.0123
PRO 1270.0098
ALA 1280.0106
ALA 1290.0110
ILE 1300.0103
THR 1310.0062
ARG 1320.0073
LEU 1330.0082
PHE 1340.0039
ARG 1350.0088
SER 1360.0094
PRO 1370.0140
LEU 1380.0072
ASP 1390.0097
TRP 1400.0127
ASN 1410.0128
LEU 1420.0139
PHE 1430.0196
SER 1440.0185
GLU 1450.0195
LEU 1460.0123
GLN 1470.0082
GLU 1480.0205
GLN 1490.0121
LEU 1500.0097
ALA 1510.0148
GLU 1520.0172
ARG 1530.0079
GLN 1540.0156
ILE 1550.0093
TYR 1560.0079
MET 1570.0070
ALA 1580.0079
ARG 1590.0085
GLY 1600.0080
ARG 1610.0106
LEU 1620.0079
LEU 1630.0063
GLY 1640.0056
GLY 1650.0070
SER 1660.0071
SER 1670.0063
ALA 1680.0036
THR 1690.0053
ASN 1700.0074
ALA 1710.0075
THR 1720.0060
LEU 1730.0053
TYR 1740.0051
HISD 1750.0056
ARG 1760.0080
GLY 1770.0093
ALA 1780.0090
ALA 1790.0138
GLY 1800.0161
ASP 1810.0151
TYR 1820.0125
ASP 1830.0165
ALA 1840.0199
TRP 1850.0125
GLY 1860.0079
VAL 1870.0070
GLU 1880.0133
GLY 1890.0100
TRP 1900.0078
SER 1910.0111
SER 1920.0132
GLU 1930.0183
ASP 1940.0105
VAL 1950.0094
LEU 1960.0086
SER 1970.0094
TRP 1980.0098
PHE 1990.0088
VAL 2000.0072
GLN 2010.0084
ALA 2020.0087
GLU 2030.0068
THR 2040.0045
ASN 2050.0033
ALA 2060.0116
ASP 2070.0096
PHE 2080.0079
GLY 2090.0142
PRO 2100.0160
GLY 2110.0169
ALA 2120.0095
TYR 2130.0086
HISH 2140.0058
GLY 2150.0056
SER 2160.0074
GLY 2170.0047
GLY 2180.0052
PRO 2190.0046
MET 2200.0044
ARG 2210.0063
VAL 2220.0056
GLU 2230.0044
ASN 2240.0076
PRO 2250.0055
ARG 2260.0094
TYR 2270.0033
THR 2280.0042
ASN 2290.0048
LYS 2300.0079
GLN 2310.0040
LEU 2320.0043
HISE 2330.0049
THR 2340.0054
ALA 2350.0042
PHE 2360.0050
PHE 2370.0095
LYS 2380.0107
ALA 2390.0089
ALA 2400.0085
GLU 2410.0134
GLU 2420.0156
VAL 2430.0103
GLY 2440.0116
LEU 2450.0080
THR 2460.0103
PRO 2470.0119
ASN 2480.0086
SER 2490.0071
ASP 2500.0058
PHE 2510.0053
ASN 2520.0044
ASP 2530.0055
TRP 2540.0084
SER 2550.0091
HISE 2560.0090
ASP 2570.0095
HISE 2580.0085
ALA 2590.0097
GLY 2600.0089
TYR 2610.0087
GLY 2620.0117
THR 2630.0055
PHE 2640.0058
GLN 2650.0061
VAL 2660.0050
MET 2670.0052
GLN 2680.0046
ASP 2690.0096
LYS 2700.0127
GLY 2710.0117
THR 2720.0066
ARG 2730.0034
ALA 2740.0042
ASP 2750.0036
MET 2760.0031
TYR 2770.0007
ARG 2780.0022
GLN 2790.0017
TYR 2800.0026
LEU 2810.0027
LYS 2820.0038
PRO 2830.0055
VAL 2840.0050
LEU 2850.0050
GLY 2860.0060
ARG 2870.0039
ARG 2880.0046
ASN 2890.0033
LEU 2900.0025
GLN 2910.0030
VAL 2920.0040
LEU 2930.0080
THR 2940.0103
GLY 2950.0124
ALA 2960.0096
ALA 2970.0090
VAL 2980.0070
THR 2990.0056
LYS 3000.0048
VAL 3010.0059
ASN 3020.0064
ILE 3030.0091
ASP 3040.0127
GLN 3050.0155
ALA 3060.0175
ALA 3070.0169
GLY 3080.0071
LYS 3090.0093
ALA 3100.0112
GLN 3110.0145
ALA 3120.0107
LEU 3130.0106
GLY 3140.0026
VAL 3150.0035
GLU 3160.0038
PHE 3170.0081
SER 3180.0095
THR 3190.0111
ASP 3200.0045
GLY 3210.0022
PRO 3220.0043
THR 3230.0172
GLY 3240.0116
GLU 3250.0176
ARG 3260.0098
LEU 3270.0096
SER 3280.0076
ALA 3290.0060
GLU 3300.0062
LEU 3310.0042
ALA 3320.0076
PRO 3330.0116
GLY 3340.0147
GLY 3350.0039
GLU 3360.0029
VAL 3370.0017
ILE 3380.0043
MET 3390.0027
CYS 3400.0022
ALA 3410.0041
GLY 3420.0044
ALA 3430.0049
VAL 3440.0069
HISD 3450.0052
THR 3460.0047
PRO 3470.0068
PHE 3480.0071
LEU 3490.0075
LEU 3500.0099
LYS 3510.0098
HISE 3520.0106
SER 3530.0101
GLY 3540.0087
VAL 3550.0085
GLY 3560.0110
PRO 3570.0098
SER 3580.0054
ALA 3590.0178
GLU 3600.0140
LEU 3610.0037
LYS 3620.0112
GLU 3630.0063
PHE 3640.0122
GLY 3650.0144
ILE 3660.0183
PRO 3670.0232
VAL 3680.0077
VAL 3690.0073
SER 3700.0049
ASN 3710.0069
LEU 3720.0112
ALA 3730.0155
GLY 3740.0092
VAL 3750.0089
GLY 3760.0091
GLN 3770.0058
ASN 3780.0039
LEU 3790.0046
GLN 3800.0058
ASP 3810.0044
GLN 3820.0038
PRO 3830.0037
ALA 3840.0042
CYS 3850.0052
LEU 3860.0060
THR 3870.0043
ALA 3880.0057
ALA 3890.0078
PRO 3900.0066
VAL 3910.0062
LYS 3920.0151
GLU 3930.0187
LYS 3940.0148
TYR 3950.0042
ASP 3960.0120
GLY 3970.0171
ILE 3980.0076
ALA 3990.0058
ILE 4000.0058
SER 4010.0083
ASP 4020.0091
HISE 4030.0094
ILE 4040.0113
TYR 4050.0113
ASN 4060.0120
GLU 4070.0100
LYS 4080.0089
GLY 4090.0104
GLN 4100.0138
ILE 4110.0164
ARG 4120.0165
LYS 4130.0134
ARG 4140.0055
ALA 4150.0174
ILE 4160.0131
ALA 4170.0073
SER 4180.0085
TYR 4190.0040
LEU 4200.0098
LEU 4210.0080
GLY 4220.0236
GLY 4230.0157
ARG 4240.0151
GLY 4250.0091
GLY 4260.0085
LEU 4270.0054
THR 4280.0055
SER 4290.0050
THR 4300.0066
GLY 4310.0048
CYS 4320.0063
ASP 4330.0063
ARG 4340.0064
GLY 4350.0059
ALA 4360.0057
PHE 4370.0072
VAL 4380.0076
ARG 4390.0077
THR 4400.0105
ALA 4410.0105
GLY 4420.0101
GLN 4430.0151
ALA 4440.0126
LEU 4450.0115
PRO 4460.0069
ASP 4470.0045
LEU 4480.0040
GLN 4490.0013
VAL 4500.0023
ARG 4510.0035
PHE 4520.0052
VAL 4530.0053
PRO 4540.0046
GLY 4550.0080
MET 4560.0084
ALA 4570.0093
LEU 4580.0085
ASP 4590.0068
PRO 4600.0058
ASP 4610.0057
GLY 4620.0051
VAL 4630.0030
SER 4640.0035
THR 4650.0043
TYR 4660.0052
VAL 4670.0048
ARG 4680.0047
PHE 4690.0054
ALA 4700.0056
LYS 4710.0049
PHE 4720.0049
GLN 4730.0063
SER 4740.0068
GLN 4750.0065
GLY 4760.0068
LEU 4770.0036
LYS 4780.0039
TRP 4790.0064
PRO 4800.0074
SER 4810.0068
GLY 4820.0074
ILE 4830.0065
THR 4840.0062
MET 4850.0037
GLN 4860.0039
LEU 4870.0034
ILE 4880.0009
ALA 4890.0009
CYS 4900.0023
ARG 4910.0057
PRO 4920.0052
GLN 4930.0038
SER 4940.0047
THR 4950.0045
GLY 4960.0060
SER 4970.0090
VAL 4980.0083
GLY 4990.0111
LEU 5000.0165
LYS 5010.0155
SER 5020.0142
ALA 5030.0183
ASP 5040.0124
PRO 5050.0120
PHE 5060.0101
ALA 5070.0088
PRO 5080.0109
PRO 5090.0120
LYS 5100.0160
LEU 5110.0144
SER 5120.0124
PRO 5130.0077
GLY 5140.0064
TYR 5150.0038
LEU 5160.0044
THR 5170.0038
ASP 5180.0130
LYS 5190.0100
ASP 5200.0143
GLY 5210.0086
ALA 5220.0086
ASP 5230.0072
LEU 5240.0069
ALA 5250.0057
THR 5260.0048
LEU 5270.0068
ARG 5280.0064
LYS 5290.0065
GLY 5300.0063
ILE 5310.0057
HISE 5320.0061
TRP 5330.0035
ALA 5340.0032
ARG 5350.0039
ASP 5360.0071
VAL 5370.0050
ALA 5380.0037
ARG 5390.0076
SER 5400.0091
SER 5410.0107
ALA 5420.0036
LEU 5430.0004
SER 5440.0037
GLU 5450.0123
TYR 5460.0094
LEU 5470.0081
ASP 5480.0089
GLY 5490.0061
GLU 5500.0051
LEU 5510.0066
PHE 5520.0059
PRO 5530.0038
GLY 5540.0066
SER 5550.0061
GLY 5560.0043
VAL 5570.0085
VAL 5580.0086
SER 5590.0138
ASP 5600.0209
ASP 5610.0192
GLN 5620.0120
ILE 5630.0117
ASP 5640.0123
GLU 5650.0099
TYR 5660.0076
ILE 5670.0086
ARG 5680.0079
ARG 5690.0077
SER 5700.0073
ILE 5710.0067
HISD 5720.0031
SER 5730.0012
SER 5740.0024
ASN 5750.0044
ALA 5760.0063
ILE 5770.0070
THR 5780.0070
GLY 5790.0054
THR 5800.0056
CYS 5810.0065
LYS 5820.0066
MET 5830.0072
GLY 5840.0168
ASN 5850.0201
ALA 5860.0270
GLY 5870.0386
ASP 5880.0296
SER 5890.0293
SER 5900.0162
SER 5910.0120
VAL 5920.0102
VAL 5930.0121
ASP 5940.0119
ASN 5950.0123
GLN 5960.0110
LEU 5970.0113
ARG 5980.0120
VAL 5990.0093
HISE 6000.0094
GLY 6010.0103
VAL 6020.0121
GLU 6030.0132
GLY 6040.0099
LEU 6050.0050
ARG 6060.0052
VAL 6070.0059
VAL 6080.0059
ASP 6090.0059
ALA 6100.0055
SER 6110.0068
VAL 6120.0064
VAL 6130.0055
PRO 6140.0086
LYS 6150.0100
ILE 6160.0082
PRO 6170.0087
GLY 6180.0081
GLY 6190.0069
GLN 6200.0064
THR 6210.0065
GLY 6220.0067
ALA 6230.0092
PRO 6240.0081
VAL 6250.0089
VAL 6260.0103
MET 6270.0099
ILE 6280.0098
ALA 6290.0106
GLU 6300.0101
ARG 6310.0103
ALA 6320.0093
ALA 6330.0080
ALA 6340.0082
LEU 6350.0110
LEU 6360.0076
THR 6370.0057
GLY 6380.0157
LYS 6390.0079
ALA 6400.0140
THR 6410.0152
ILE 6420.0181
GLY 6430.0242
ALA 6440.0372
SER 6450.0100
ALA 6460.0157
ALA 6470.0097
ALA 6480.0073
PRO 6490.0081

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.