CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 78  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0716
SER 770.0428
PRO 780.0261
VAL 790.0085
ALA 800.0080
GLY 810.0132
GLN 820.0140
LYS 830.0108
TYR 840.0031
ASP 850.0013
TYR 860.0021
ILE 870.0011
LEU 880.0024
VAL 890.0028
GLY 900.0033
GLY 910.0042
GLY 920.0052
THR 930.0042
ALA 940.0042
ALA 950.0048
CYS 960.0041
VAL 970.0029
LEU 980.0047
ALA 990.0047
ASN 1000.0034
ARG 1010.0033
LEU 1020.0041
SER 1030.0042
ALA 1040.0092
ASP 1050.0111
GLY 1060.0092
SER 1070.0132
LYS 1080.0101
ARG 1090.0074
VAL 1100.0037
LEU 1110.0031
VAL 1120.0042
LEU 1130.0034
GLU 1140.0053
ALA 1150.0061
GLY 1160.0125
PRO 1170.0128
ASP 1180.0113
ASN 1190.0105
THR 1200.0166
SER 1210.0158
ARG 1220.0147
ASP 1230.0100
VAL 1240.0037
LYS 1250.0057
ILE 1260.0033
PRO 1270.0061
ALA 1280.0033
ALA 1290.0032
ILE 1300.0033
THR 1310.0033
ARG 1320.0025
LEU 1330.0017
PHE 1340.0039
ARG 1350.0035
SER 1360.0061
PRO 1370.0123
LEU 1380.0079
ASP 1390.0059
TRP 1400.0040
ASN 1410.0021
LEU 1420.0028
PHE 1430.0083
SER 1440.0085
GLU 1450.0085
LEU 1460.0112
GLN 1470.0144
GLU 1480.0203
GLN 1490.0107
LEU 1500.0084
ALA 1510.0070
GLU 1520.0161
ARG 1530.0085
GLN 1540.0082
ILE 1550.0084
TYR 1560.0068
MET 1570.0060
ALA 1580.0035
ARG 1590.0029
GLY 1600.0036
ARG 1610.0085
LEU 1620.0079
LEU 1630.0067
GLY 1640.0039
GLY 1650.0047
SER 1660.0038
SER 1670.0027
ALA 1680.0020
THR 1690.0024
ASN 1700.0063
ALA 1710.0065
THR 1720.0058
LEU 1730.0045
TYR 1740.0038
HISD 1750.0044
ARG 1760.0098
GLY 1770.0102
ALA 1780.0110
ALA 1790.0133
GLY 1800.0092
ASP 1810.0063
TYR 1820.0033
ASP 1830.0042
ALA 1840.0015
TRP 1850.0096
GLY 1860.0095
VAL 1870.0102
GLU 1880.0072
GLY 1890.0081
TRP 1900.0084
SER 1910.0096
SER 1920.0135
GLU 1930.0207
ASP 1940.0121
VAL 1950.0072
LEU 1960.0142
SER 1970.0151
TRP 1980.0109
PHE 1990.0111
VAL 2000.0139
GLN 2010.0135
ALA 2020.0122
GLU 2030.0125
THR 2040.0116
ASN 2050.0089
ALA 2060.0149
ASP 2070.0223
PHE 2080.0201
GLY 2090.0123
PRO 2100.0211
GLY 2110.0304
ALA 2120.0176
TYR 2130.0116
HISH 2140.0091
GLY 2150.0149
SER 2160.0199
GLY 2170.0203
GLY 2180.0087
PRO 2190.0079
MET 2200.0063
ARG 2210.0052
VAL 2220.0056
GLU 2230.0107
ASN 2240.0126
PRO 2250.0104
ARG 2260.0116
TYR 2270.0083
THR 2280.0081
ASN 2290.0078
LYS 2300.0079
GLN 2310.0071
LEU 2320.0067
HISE 2330.0060
THR 2340.0062
ALA 2350.0065
PHE 2360.0055
PHE 2370.0060
LYS 2380.0098
ALA 2390.0085
ALA 2400.0068
GLU 2410.0112
GLU 2420.0155
VAL 2430.0146
GLY 2440.0148
LEU 2450.0098
THR 2460.0089
PRO 2470.0070
ASN 2480.0094
SER 2490.0091
ASP 2500.0065
PHE 2510.0073
ASN 2520.0080
ASP 2530.0087
TRP 2540.0183
SER 2550.0205
HISE 2560.0221
ASP 2570.0165
HISE 2580.0134
ALA 2590.0158
GLY 2600.0098
TYR 2610.0060
GLY 2620.0043
THR 2630.0028
PHE 2640.0016
GLN 2650.0042
VAL 2660.0044
MET 2670.0045
GLN 2680.0072
ASP 2690.0119
LYS 2700.0281
GLY 2710.0121
THR 2720.0073
ARG 2730.0063
ALA 2740.0050
ASP 2750.0015
MET 2760.0008
TYR 2770.0028
ARG 2780.0032
GLN 2790.0015
TYR 2800.0026
LEU 2810.0035
LYS 2820.0064
PRO 2830.0066
VAL 2840.0061
LEU 2850.0051
GLY 2860.0042
ARG 2870.0112
ARG 2880.0159
ASN 2890.0125
LEU 2900.0043
GLN 2910.0049
VAL 2920.0054
LEU 2930.0035
THR 2940.0056
GLY 2950.0052
ALA 2960.0061
ALA 2970.0065
VAL 2980.0049
THR 2990.0071
LYS 3000.0069
VAL 3010.0064
ASN 3020.0094
ILE 3030.0092
ASP 3040.0100
GLN 3050.0098
ALA 3060.0109
ALA 3070.0113
GLY 3080.0090
LYS 3090.0081
ALA 3100.0092
GLN 3110.0087
ALA 3120.0088
LEU 3130.0101
GLY 3140.0055
VAL 3150.0063
GLU 3160.0079
PHE 3170.0102
SER 3180.0108
THR 3190.0115
ASP 3200.0165
GLY 3210.0123
PRO 3220.0069
THR 3230.0092
GLY 3240.0170
GLU 3250.0167
ARG 3260.0119
LEU 3270.0126
SER 3280.0131
ALA 3290.0026
GLU 3300.0043
LEU 3310.0042
ALA 3320.0098
PRO 3330.0290
GLY 3340.0345
GLY 3350.0035
GLU 3360.0034
VAL 3370.0033
ILE 3380.0041
MET 3390.0043
CYS 3400.0051
ALA 3410.0059
GLY 3420.0061
ALA 3430.0054
VAL 3440.0038
HISD 3450.0039
THR 3460.0042
PRO 3470.0009
PHE 3480.0011
LEU 3490.0010
LEU 3500.0029
LYS 3510.0022
HISE 3520.0015
SER 3530.0040
GLY 3540.0031
VAL 3550.0036
GLY 3560.0043
PRO 3570.0025
SER 3580.0045
ALA 3590.0102
GLU 3600.0092
LEU 3610.0066
LYS 3620.0115
GLU 3630.0145
PHE 3640.0123
GLY 3650.0094
ILE 3660.0050
PRO 3670.0044
VAL 3680.0031
VAL 3690.0061
SER 3700.0051
ASN 3710.0027
LEU 3720.0073
ALA 3730.0124
GLY 3740.0085
VAL 3750.0048
GLY 3760.0036
GLN 3770.0044
ASN 3780.0033
LEU 3790.0008
GLN 3800.0022
ASP 3810.0032
GLN 3820.0029
PRO 3830.0034
ALA 3840.0029
CYS 3850.0025
LEU 3860.0024
THR 3870.0030
ALA 3880.0037
ALA 3890.0091
PRO 3900.0094
VAL 3910.0082
LYS 3920.0147
GLU 3930.0130
LYS 3940.0129
TYR 3950.0112
ASP 3960.0153
GLY 3970.0174
ILE 3980.0074
ALA 3990.0049
ILE 4000.0038
SER 4010.0044
ASP 4020.0065
HISE 4030.0053
ILE 4040.0096
TYR 4050.0090
ASN 4060.0115
GLU 4070.0263
LYS 4080.0180
GLY 4090.0046
GLN 4100.0060
ILE 4110.0107
ARG 4120.0138
LYS 4130.0149
ARG 4140.0061
ALA 4150.0161
ILE 4160.0180
ALA 4170.0123
SER 4180.0108
TYR 4190.0108
LEU 4200.0075
LEU 4210.0046
GLY 4220.0115
GLY 4230.0099
ARG 4240.0140
GLY 4250.0093
GLY 4260.0105
LEU 4270.0078
THR 4280.0085
SER 4290.0060
THR 4300.0050
GLY 4310.0051
CYS 4320.0038
ASP 4330.0031
ARG 4340.0020
GLY 4350.0023
ALA 4360.0054
PHE 4370.0088
VAL 4380.0099
ARG 4390.0102
THR 4400.0099
ALA 4410.0106
GLY 4420.0098
GLN 4430.0070
ALA 4440.0060
LEU 4450.0112
PRO 4460.0079
ASP 4470.0080
LEU 4480.0076
GLN 4490.0046
VAL 4500.0031
ARG 4510.0015
PHE 4520.0041
VAL 4530.0046
PRO 4540.0054
GLY 4550.0055
MET 4560.0050
ALA 4570.0047
LEU 4580.0036
ASP 4590.0032
PRO 4600.0040
ASP 4610.0067
GLY 4620.0076
VAL 4630.0077
SER 4640.0073
THR 4650.0073
TYR 4660.0078
VAL 4670.0089
ARG 4680.0078
PHE 4690.0079
ALA 4700.0110
LYS 4710.0104
PHE 4720.0088
GLN 4730.0104
SER 4740.0138
GLN 4750.0124
GLY 4760.0128
LEU 4770.0104
LYS 4780.0094
TRP 4790.0052
PRO 4800.0012
SER 4810.0026
GLY 4820.0064
ILE 4830.0065
THR 4840.0060
MET 4850.0026
GLN 4860.0013
LEU 4870.0010
ILE 4880.0030
ALA 4890.0048
CYS 4900.0052
ARG 4910.0070
PRO 4920.0077
GLN 4930.0094
SER 4940.0053
THR 4950.0053
GLY 4960.0069
SER 4970.0048
VAL 4980.0024
GLY 4990.0025
LEU 5000.0035
LYS 5010.0033
SER 5020.0051
ALA 5030.0061
ASP 5040.0049
PRO 5050.0033
PHE 5060.0040
ALA 5070.0030
PRO 5080.0030
PRO 5090.0011
LYS 5100.0036
LEU 5110.0046
SER 5120.0099
PRO 5130.0096
GLY 5140.0100
TYR 5150.0062
LEU 5160.0046
THR 5170.0065
ASP 5180.0109
LYS 5190.0043
ASP 5200.0132
GLY 5210.0100
ALA 5220.0086
ASP 5230.0044
LEU 5240.0038
ALA 5250.0059
THR 5260.0049
LEU 5270.0036
ARG 5280.0052
LYS 5290.0072
GLY 5300.0048
ILE 5310.0059
HISE 5320.0070
TRP 5330.0046
ALA 5340.0045
ARG 5350.0049
ASP 5360.0050
VAL 5370.0031
ALA 5380.0027
ARG 5390.0026
SER 5400.0045
SER 5410.0066
ALA 5420.0065
LEU 5430.0047
SER 5440.0069
GLU 5450.0102
TYR 5460.0079
LEU 5470.0115
ASP 5480.0120
GLY 5490.0103
GLU 5500.0108
LEU 5510.0040
PHE 5520.0041
PRO 5530.0032
GLY 5540.0042
SER 5550.0048
GLY 5560.0024
VAL 5570.0069
VAL 5580.0087
SER 5590.0101
ASP 5600.0104
ASP 5610.0071
GLN 5620.0060
ILE 5630.0073
ASP 5640.0055
GLU 5650.0055
TYR 5660.0050
ILE 5670.0048
ARG 5680.0045
ARG 5690.0063
SER 5700.0064
ILE 5710.0064
HISD 5720.0065
SER 5730.0055
SER 5740.0040
ASN 5750.0039
ALA 5760.0030
ILE 5770.0028
THR 5780.0050
GLY 5790.0044
THR 5800.0037
CYS 5810.0069
LYS 5820.0091
MET 5830.0106
GLY 5840.0144
ASN 5850.0287
ALA 5860.0409
GLY 5870.0716
ASP 5880.0461
SER 5890.0399
SER 5900.0133
SER 5910.0123
VAL 5920.0074
VAL 5930.0109
ASP 5940.0107
ASN 5950.0109
GLN 5960.0120
LEU 5970.0120
ARG 5980.0145
VAL 5990.0061
HISE 6000.0046
GLY 6010.0033
VAL 6020.0058
GLU 6030.0050
GLY 6040.0049
LEU 6050.0047
ARG 6060.0064
VAL 6070.0085
VAL 6080.0077
ASP 6090.0079
ALA 6100.0080
SER 6110.0081
VAL 6120.0086
VAL 6130.0085
PRO 6140.0073
LYS 6150.0061
ILE 6160.0062
PRO 6170.0047
GLY 6180.0059
GLY 6190.0054
GLN 6200.0027
THR 6210.0020
GLY 6220.0029
ALA 6230.0037
PRO 6240.0008
VAL 6250.0036
VAL 6260.0031
MET 6270.0008
ILE 6280.0040
ALA 6290.0052
GLU 6300.0026
ARG 6310.0066
ALA 6320.0093
ALA 6330.0044
ALA 6340.0087
LEU 6350.0099
LEU 6360.0050
THR 6370.0086
GLY 6380.0083
LYS 6390.0226
ALA 6400.0276
THR 6410.0305
ILE 6420.0236
GLY 6430.0308
ALA 6440.0092
SER 6450.0076
ALA 6460.0072
ALA 6470.0094
ALA 6480.0040
PRO 6490.0057

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.