CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 79  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0519
SER 770.0505
PRO 780.0349
VAL 790.0127
ALA 800.0184
GLY 810.0318
GLN 820.0269
LYS 830.0182
TYR 840.0069
ASP 850.0047
TYR 860.0045
ILE 870.0026
LEU 880.0037
VAL 890.0034
GLY 900.0011
GLY 910.0026
GLY 920.0063
THR 930.0054
ALA 940.0025
ALA 950.0030
CYS 960.0037
VAL 970.0030
LEU 980.0034
ALA 990.0034
ASN 1000.0039
ARG 1010.0073
LEU 1020.0073
SER 1030.0072
ALA 1040.0197
ASP 1050.0207
GLY 1060.0212
SER 1070.0234
LYS 1080.0181
ARG 1090.0141
VAL 1100.0058
LEU 1110.0040
VAL 1120.0043
LEU 1130.0058
GLU 1140.0029
ALA 1150.0028
GLY 1160.0124
PRO 1170.0114
ASP 1180.0120
ASN 1190.0153
THR 1200.0105
SER 1210.0072
ARG 1220.0162
ASP 1230.0060
VAL 1240.0110
LYS 1250.0127
ILE 1260.0061
PRO 1270.0083
ALA 1280.0031
ALA 1290.0032
ILE 1300.0061
THR 1310.0060
ARG 1320.0067
LEU 1330.0108
PHE 1340.0122
ARG 1350.0140
SER 1360.0184
PRO 1370.0191
LEU 1380.0189
ASP 1390.0189
TRP 1400.0156
ASN 1410.0142
LEU 1420.0107
PHE 1430.0069
SER 1440.0094
GLU 1450.0095
LEU 1460.0268
GLN 1470.0144
GLU 1480.0233
GLN 1490.0129
LEU 1500.0097
ALA 1510.0118
GLU 1520.0178
ARG 1530.0147
GLN 1540.0173
ILE 1550.0047
TYR 1560.0002
MET 1570.0050
ALA 1580.0110
ARG 1590.0135
GLY 1600.0170
ARG 1610.0177
LEU 1620.0136
LEU 1630.0126
GLY 1640.0114
GLY 1650.0126
SER 1660.0144
SER 1670.0152
ALA 1680.0133
THR 1690.0134
ASN 1700.0092
ALA 1710.0078
THR 1720.0090
LEU 1730.0013
TYR 1740.0018
HISD 1750.0026
ARG 1760.0096
GLY 1770.0092
ALA 1780.0070
ALA 1790.0094
GLY 1800.0112
ASP 1810.0112
TYR 1820.0088
ASP 1830.0112
ALA 1840.0158
TRP 1850.0147
GLY 1860.0163
VAL 1870.0141
GLU 1880.0168
GLY 1890.0117
TRP 1900.0070
SER 1910.0079
SER 1920.0054
GLU 1930.0029
ASP 1940.0032
VAL 1950.0044
LEU 1960.0070
SER 1970.0085
TRP 1980.0080
PHE 1990.0097
VAL 2000.0109
GLN 2010.0111
ALA 2020.0113
GLU 2030.0106
THR 2040.0106
ASN 2050.0097
ALA 2060.0147
ASP 2070.0132
PHE 2080.0080
GLY 2090.0125
PRO 2100.0243
GLY 2110.0310
ALA 2120.0223
TYR 2130.0136
HISH 2140.0122
GLY 2150.0143
SER 2160.0170
GLY 2170.0168
GLY 2180.0053
PRO 2190.0046
MET 2200.0061
ARG 2210.0060
VAL 2220.0059
GLU 2230.0044
ASN 2240.0048
PRO 2250.0053
ARG 2260.0091
TYR 2270.0088
THR 2280.0083
ASN 2290.0076
LYS 2300.0113
GLN 2310.0098
LEU 2320.0049
HISE 2330.0020
THR 2340.0050
ALA 2350.0041
PHE 2360.0029
PHE 2370.0059
LYS 2380.0082
ALA 2390.0056
ALA 2400.0069
GLU 2410.0106
GLU 2420.0088
VAL 2430.0066
GLY 2440.0102
LEU 2450.0086
THR 2460.0110
PRO 2470.0100
ASN 2480.0074
SER 2490.0061
ASP 2500.0037
PHE 2510.0043
ASN 2520.0042
ASP 2530.0032
TRP 2540.0062
SER 2550.0089
HISE 2560.0108
ASP 2570.0097
HISE 2580.0069
ALA 2590.0062
GLY 2600.0080
TYR 2610.0055
GLY 2620.0043
THR 2630.0012
PHE 2640.0010
GLN 2650.0018
VAL 2660.0055
MET 2670.0055
GLN 2680.0060
ASP 2690.0148
LYS 2700.0169
GLY 2710.0107
THR 2720.0139
ARG 2730.0127
ALA 2740.0136
ASP 2750.0113
MET 2760.0086
TYR 2770.0117
ARG 2780.0137
GLN 2790.0088
TYR 2800.0060
LEU 2810.0085
LYS 2820.0156
PRO 2830.0184
VAL 2840.0079
LEU 2850.0072
GLY 2860.0069
ARG 2870.0129
ARG 2880.0158
ASN 2890.0100
LEU 2900.0055
GLN 2910.0059
VAL 2920.0050
LEU 2930.0084
THR 2940.0049
GLY 2950.0049
ALA 2960.0086
ALA 2970.0083
VAL 2980.0086
THR 2990.0118
LYS 3000.0083
VAL 3010.0055
ASN 3020.0063
ILE 3030.0072
ASP 3040.0133
GLN 3050.0125
ALA 3060.0038
ALA 3070.0105
GLY 3080.0132
LYS 3090.0064
ALA 3100.0017
GLN 3110.0067
ALA 3120.0041
LEU 3130.0092
GLY 3140.0047
VAL 3150.0066
GLU 3160.0096
PHE 3170.0141
SER 3180.0136
THR 3190.0131
ASP 3200.0075
GLY 3210.0112
PRO 3220.0180
THR 3230.0334
GLY 3240.0165
GLU 3250.0222
ARG 3260.0177
LEU 3270.0174
SER 3280.0181
ALA 3290.0046
GLU 3300.0059
LEU 3310.0072
ALA 3320.0142
PRO 3330.0429
GLY 3340.0495
GLY 3350.0028
GLU 3360.0023
VAL 3370.0021
ILE 3380.0017
MET 3390.0020
CYS 3400.0023
ALA 3410.0012
GLY 3420.0018
ALA 3430.0019
VAL 3440.0033
HISD 3450.0019
THR 3460.0014
PRO 3470.0026
PHE 3480.0025
LEU 3490.0028
LEU 3500.0027
LYS 3510.0023
HISE 3520.0025
SER 3530.0032
GLY 3540.0025
VAL 3550.0015
GLY 3560.0033
PRO 3570.0035
SER 3580.0030
ALA 3590.0050
GLU 3600.0051
LEU 3610.0029
LYS 3620.0027
GLU 3630.0037
PHE 3640.0047
GLY 3650.0038
ILE 3660.0033
PRO 3670.0029
VAL 3680.0024
VAL 3690.0025
SER 3700.0018
ASN 3710.0041
LEU 3720.0046
ALA 3730.0059
GLY 3740.0042
VAL 3750.0021
GLY 3760.0015
GLN 3770.0020
ASN 3780.0023
LEU 3790.0029
GLN 3800.0027
ASP 3810.0023
GLN 3820.0022
PRO 3830.0057
ALA 3840.0054
CYS 3850.0058
LEU 3860.0051
THR 3870.0032
ALA 3880.0025
ALA 3890.0027
PRO 3900.0046
VAL 3910.0080
LYS 3920.0135
GLU 3930.0123
LYS 3940.0167
TYR 3950.0115
ASP 3960.0145
GLY 3970.0159
ILE 3980.0082
ALA 3990.0046
ILE 4000.0032
SER 4010.0044
ASP 4020.0050
HISE 4030.0036
ILE 4040.0078
TYR 4050.0075
ASN 4060.0082
GLU 4070.0208
LYS 4080.0144
GLY 4090.0055
GLN 4100.0054
ILE 4110.0079
ARG 4120.0089
LYS 4130.0105
ARG 4140.0040
ALA 4150.0130
ILE 4160.0151
ALA 4170.0128
SER 4180.0123
TYR 4190.0085
LEU 4200.0063
LEU 4210.0103
GLY 4220.0204
GLY 4230.0138
ARG 4240.0119
GLY 4250.0077
GLY 4260.0073
LEU 4270.0056
THR 4280.0054
SER 4290.0051
THR 4300.0042
GLY 4310.0031
CYS 4320.0030
ASP 4330.0028
ARG 4340.0025
GLY 4350.0027
ALA 4360.0040
PHE 4370.0044
VAL 4380.0043
ARG 4390.0037
THR 4400.0098
ALA 4410.0123
GLY 4420.0102
GLN 4430.0102
ALA 4440.0061
LEU 4450.0038
PRO 4460.0026
ASP 4470.0025
LEU 4480.0022
GLN 4490.0021
VAL 4500.0019
ARG 4510.0020
PHE 4520.0026
VAL 4530.0028
PRO 4540.0028
GLY 4550.0009
MET 4560.0023
ALA 4570.0053
LEU 4580.0091
ASP 4590.0094
PRO 4600.0095
ASP 4610.0087
GLY 4620.0063
VAL 4630.0036
SER 4640.0067
THR 4650.0068
TYR 4660.0042
VAL 4670.0052
ARG 4680.0066
PHE 4690.0052
ALA 4700.0063
LYS 4710.0060
PHE 4720.0053
GLN 4730.0085
SER 4740.0117
GLN 4750.0112
GLY 4760.0125
LEU 4770.0091
LYS 4780.0071
TRP 4790.0062
PRO 4800.0042
SER 4810.0023
GLY 4820.0028
ILE 4830.0019
THR 4840.0016
MET 4850.0001
GLN 4860.0011
LEU 4870.0018
ILE 4880.0008
ALA 4890.0015
CYS 4900.0014
ARG 4910.0034
PRO 4920.0041
GLN 4930.0084
SER 4940.0078
THR 4950.0073
GLY 4960.0070
SER 4970.0046
VAL 4980.0028
GLY 4990.0032
LEU 5000.0052
LYS 5010.0069
SER 5020.0073
ALA 5030.0054
ASP 5040.0069
PRO 5050.0098
PHE 5060.0073
ALA 5070.0052
PRO 5080.0088
PRO 5090.0031
LYS 5100.0037
LEU 5110.0037
SER 5120.0062
PRO 5130.0058
GLY 5140.0054
TYR 5150.0079
LEU 5160.0073
THR 5170.0083
ASP 5180.0125
LYS 5190.0066
ASP 5200.0121
GLY 5210.0097
ALA 5220.0100
ASP 5230.0085
LEU 5240.0059
ALA 5250.0061
THR 5260.0060
LEU 5270.0057
ARG 5280.0046
LYS 5290.0059
GLY 5300.0047
ILE 5310.0029
HISE 5320.0041
TRP 5330.0022
ALA 5340.0017
ARG 5350.0027
ASP 5360.0037
VAL 5370.0028
ALA 5380.0037
ARG 5390.0057
SER 5400.0060
SER 5410.0088
ALA 5420.0039
LEU 5430.0035
SER 5440.0055
GLU 5450.0064
TYR 5460.0063
LEU 5470.0052
ASP 5480.0051
GLY 5490.0030
GLU 5500.0018
LEU 5510.0051
PHE 5520.0059
PRO 5530.0057
GLY 5540.0060
SER 5550.0059
GLY 5560.0041
VAL 5570.0044
VAL 5580.0064
SER 5590.0040
ASP 5600.0056
ASP 5610.0069
GLN 5620.0019
ILE 5630.0048
ASP 5640.0069
GLU 5650.0075
TYR 5660.0068
ILE 5670.0072
ARG 5680.0069
ARG 5690.0095
SER 5700.0096
ILE 5710.0098
HISD 5720.0058
SER 5730.0035
SER 5740.0033
ASN 5750.0038
ALA 5760.0050
ILE 5770.0044
THR 5780.0031
GLY 5790.0028
THR 5800.0017
CYS 5810.0019
LYS 5820.0031
MET 5830.0030
GLY 5840.0122
ASN 5850.0262
ALA 5860.0306
GLY 5870.0519
ASP 5880.0313
SER 5890.0216
SER 5900.0114
SER 5910.0075
VAL 5920.0031
VAL 5930.0029
ASP 5940.0062
ASN 5950.0080
GLN 5960.0042
LEU 5970.0029
ARG 5980.0042
VAL 5990.0010
HISE 6000.0013
GLY 6010.0022
VAL 6020.0015
GLU 6030.0032
GLY 6040.0025
LEU 6050.0022
ARG 6060.0021
VAL 6070.0018
VAL 6080.0013
ASP 6090.0017
ALA 6100.0023
SER 6110.0018
VAL 6120.0013
VAL 6130.0030
PRO 6140.0060
LYS 6150.0069
ILE 6160.0068
PRO 6170.0068
GLY 6180.0060
GLY 6190.0060
GLN 6200.0036
THR 6210.0037
GLY 6220.0037
ALA 6230.0051
PRO 6240.0045
VAL 6250.0035
VAL 6260.0043
MET 6270.0050
ILE 6280.0036
ALA 6290.0045
GLU 6300.0052
ARG 6310.0038
ALA 6320.0040
ALA 6330.0058
ALA 6340.0075
LEU 6350.0070
LEU 6360.0063
THR 6370.0103
GLY 6380.0155
LYS 6390.0181
ALA 6400.0166
THR 6410.0088
ILE 6420.0063
GLY 6430.0070
ALA 6440.0048
SER 6450.0032
ALA 6460.0033
ALA 6470.0049
ALA 6480.0049
PRO 6490.0048

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.