CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0338
SER 770.0115
PRO 780.0085
VAL 790.0040
ALA 800.0080
GLY 810.0107
GLN 820.0083
LYS 830.0061
TYR 840.0031
ASP 850.0022
TYR 860.0014
ILE 870.0013
LEU 880.0012
VAL 890.0012
GLY 900.0019
GLY 910.0029
GLY 920.0046
THR 930.0045
ALA 940.0038
ALA 950.0021
CYS 960.0023
VAL 970.0019
LEU 980.0034
ALA 990.0033
ASN 1000.0041
ARG 1010.0038
LEU 1020.0048
SER 1030.0053
ALA 1040.0085
ASP 1050.0087
GLY 1060.0086
SER 1070.0076
LYS 1080.0056
ARG 1090.0040
VAL 1100.0021
LEU 1110.0020
VAL 1120.0027
LEU 1130.0041
GLU 1140.0051
ALA 1150.0061
GLY 1160.0091
PRO 1170.0095
ASP 1180.0099
ASN 1190.0103
THR 1200.0119
SER 1210.0096
ARG 1220.0159
ASP 1230.0095
VAL 1240.0066
LYS 1250.0075
ILE 1260.0058
PRO 1270.0036
ALA 1280.0046
ALA 1290.0047
ILE 1300.0046
THR 1310.0006
ARG 1320.0037
LEU 1330.0055
PHE 1340.0039
ARG 1350.0076
SER 1360.0087
PRO 1370.0096
LEU 1380.0078
ASP 1390.0055
TRP 1400.0055
ASN 1410.0054
LEU 1420.0050
PHE 1430.0033
SER 1440.0048
GLU 1450.0042
LEU 1460.0093
GLN 1470.0084
GLU 1480.0143
GLN 1490.0084
LEU 1500.0098
ALA 1510.0104
GLU 1520.0120
ARG 1530.0091
GLN 1540.0087
ILE 1550.0057
TYR 1560.0044
MET 1570.0045
ALA 1580.0031
ARG 1590.0043
GLY 1600.0056
ARG 1610.0070
LEU 1620.0071
LEU 1630.0070
GLY 1640.0049
GLY 1650.0048
SER 1660.0048
SER 1670.0040
ALA 1680.0049
THR 1690.0043
ASN 1700.0033
ALA 1710.0028
THR 1720.0018
LEU 1730.0021
TYR 1740.0036
HISD 1750.0030
ARG 1760.0111
GLY 1770.0117
ALA 1780.0118
ALA 1790.0183
GLY 1800.0168
ASP 1810.0166
TYR 1820.0186
ASP 1830.0194
ALA 1840.0199
TRP 1850.0154
GLY 1860.0135
VAL 1870.0117
GLU 1880.0091
GLY 1890.0068
TRP 1900.0106
SER 1910.0192
SER 1920.0228
GLU 1930.0211
ASP 1940.0156
VAL 1950.0163
LEU 1960.0174
SER 1970.0100
TRP 1980.0098
PHE 1990.0107
VAL 2000.0075
GLN 2010.0070
ALA 2020.0082
GLU 2030.0128
THR 2040.0137
ASN 2050.0173
ALA 2060.0195
ASP 2070.0268
PHE 2080.0265
GLY 2090.0254
PRO 2100.0178
GLY 2110.0141
ALA 2120.0058
TYR 2130.0096
HISH 2140.0137
GLY 2150.0111
SER 2160.0092
GLY 2170.0127
GLY 2180.0063
PRO 2190.0072
MET 2200.0071
ARG 2210.0106
VAL 2220.0103
GLU 2230.0096
ASN 2240.0070
PRO 2250.0056
ARG 2260.0091
TYR 2270.0186
THR 2280.0186
ASN 2290.0198
LYS 2300.0287
GLN 2310.0188
LEU 2320.0149
HISE 2330.0137
THR 2340.0119
ALA 2350.0080
PHE 2360.0078
PHE 2370.0067
LYS 2380.0043
ALA 2390.0056
ALA 2400.0081
GLU 2410.0079
GLU 2420.0068
VAL 2430.0096
GLY 2440.0120
LEU 2450.0114
THR 2460.0149
PRO 2470.0165
ASN 2480.0137
SER 2490.0169
ASP 2500.0145
PHE 2510.0067
ASN 2520.0079
ASP 2530.0068
TRP 2540.0143
SER 2550.0204
HISE 2560.0172
ASP 2570.0116
HISE 2580.0070
ALA 2590.0093
GLY 2600.0087
TYR 2610.0089
GLY 2620.0091
THR 2630.0056
PHE 2640.0040
GLN 2650.0064
VAL 2660.0030
MET 2670.0040
GLN 2680.0042
ASP 2690.0104
LYS 2700.0155
GLY 2710.0038
THR 2720.0031
ARG 2730.0026
ALA 2740.0048
ASP 2750.0010
MET 2760.0014
TYR 2770.0022
ARG 2780.0058
GLN 2790.0054
TYR 2800.0042
LEU 2810.0055
LYS 2820.0061
PRO 2830.0086
VAL 2840.0071
LEU 2850.0064
GLY 2860.0055
ARG 2870.0085
ARG 2880.0074
ASN 2890.0043
LEU 2900.0035
GLN 2910.0018
VAL 2920.0022
LEU 2930.0052
THR 2940.0061
GLY 2950.0071
ALA 2960.0070
ALA 2970.0054
VAL 2980.0032
THR 2990.0057
LYS 3000.0063
VAL 3010.0066
ASN 3020.0096
ILE 3030.0115
ASP 3040.0138
GLN 3050.0198
ALA 3060.0162
ALA 3070.0151
GLY 3080.0117
LYS 3090.0075
ALA 3100.0112
GLN 3110.0138
ALA 3120.0115
LEU 3130.0115
GLY 3140.0042
VAL 3150.0043
GLU 3160.0037
PHE 3170.0057
SER 3180.0060
THR 3190.0077
ASP 3200.0096
GLY 3210.0101
PRO 3220.0092
THR 3230.0104
GLY 3240.0093
GLU 3250.0120
ARG 3260.0047
LEU 3270.0051
SER 3280.0044
ALA 3290.0030
GLU 3300.0034
LEU 3310.0041
ALA 3320.0067
PRO 3330.0101
GLY 3340.0086
GLY 3350.0015
GLU 3360.0018
VAL 3370.0027
ILE 3380.0013
MET 3390.0009
CYS 3400.0012
ALA 3410.0018
GLY 3420.0033
ALA 3430.0046
VAL 3440.0047
HISD 3450.0033
THR 3460.0018
PRO 3470.0032
PHE 3480.0030
LEU 3490.0036
LEU 3500.0068
LYS 3510.0064
HISE 3520.0072
SER 3530.0104
GLY 3540.0099
VAL 3550.0098
GLY 3560.0105
PRO 3570.0089
SER 3580.0083
ALA 3590.0077
GLU 3600.0079
LEU 3610.0101
LYS 3620.0116
GLU 3630.0091
PHE 3640.0106
GLY 3650.0127
ILE 3660.0144
PRO 3670.0165
VAL 3680.0123
VAL 3690.0124
SER 3700.0106
ASN 3710.0078
LEU 3720.0093
ALA 3730.0097
GLY 3740.0072
VAL 3750.0073
GLY 3760.0080
GLN 3770.0092
ASN 3780.0067
LEU 3790.0070
GLN 3800.0049
ASP 3810.0049
GLN 3820.0045
PRO 3830.0055
ALA 3840.0053
CYS 3850.0053
LEU 3860.0030
THR 3870.0055
ALA 3880.0085
ALA 3890.0131
PRO 3900.0113
VAL 3910.0074
LYS 3920.0070
GLU 3930.0161
LYS 3940.0229
TYR 3950.0092
ASP 3960.0123
GLY 3970.0138
ILE 3980.0105
ALA 3990.0107
ILE 4000.0128
SER 4010.0068
ASP 4020.0056
HISE 4030.0063
ILE 4040.0086
TYR 4050.0081
ASN 4060.0086
GLU 4070.0127
LYS 4080.0095
GLY 4090.0089
GLN 4100.0106
ILE 4110.0159
ARG 4120.0175
LYS 4130.0178
ARG 4140.0300
ALA 4150.0338
ILE 4160.0199
ALA 4170.0169
SER 4180.0151
TYR 4190.0032
LEU 4200.0088
LEU 4210.0180
GLY 4220.0179
GLY 4230.0135
ARG 4240.0041
GLY 4250.0015
GLY 4260.0035
LEU 4270.0069
THR 4280.0067
SER 4290.0072
THR 4300.0078
GLY 4310.0114
CYS 4320.0094
ASP 4330.0079
ARG 4340.0082
GLY 4350.0069
ALA 4360.0058
PHE 4370.0052
VAL 4380.0060
ARG 4390.0068
THR 4400.0183
ALA 4410.0201
GLY 4420.0170
GLN 4430.0184
ALA 4440.0080
LEU 4450.0042
PRO 4460.0050
ASP 4470.0053
LEU 4480.0050
GLN 4490.0033
VAL 4500.0027
ARG 4510.0035
PHE 4520.0110
VAL 4530.0133
PRO 4540.0142
GLY 4550.0112
MET 4560.0117
ALA 4570.0130
LEU 4580.0082
ASP 4590.0041
PRO 4600.0034
ASP 4610.0035
GLY 4620.0037
VAL 4630.0033
SER 4640.0059
THR 4650.0067
TYR 4660.0052
VAL 4670.0097
ARG 4680.0103
PHE 4690.0092
ALA 4700.0131
LYS 4710.0129
PHE 4720.0107
GLN 4730.0113
SER 4740.0137
GLN 4750.0120
GLY 4760.0086
LEU 4770.0055
LYS 4780.0066
TRP 4790.0088
PRO 4800.0090
SER 4810.0089
GLY 4820.0124
ILE 4830.0116
THR 4840.0112
MET 4850.0051
GLN 4860.0031
LEU 4870.0020
ILE 4880.0038
ALA 4890.0044
CYS 4900.0046
ARG 4910.0037
PRO 4920.0042
GLN 4930.0081
SER 4940.0086
THR 4950.0088
GLY 4960.0115
SER 4970.0090
VAL 4980.0074
GLY 4990.0057
LEU 5000.0047
LYS 5010.0032
SER 5020.0021
ALA 5030.0067
ASP 5040.0054
PRO 5050.0081
PHE 5060.0060
ALA 5070.0040
PRO 5080.0034
PRO 5090.0049
LYS 5100.0054
LEU 5110.0064
SER 5120.0094
PRO 5130.0098
GLY 5140.0088
TYR 5150.0082
LEU 5160.0074
THR 5170.0098
ASP 5180.0171
LYS 5190.0131
ASP 5200.0182
GLY 5210.0149
ALA 5220.0131
ASP 5230.0087
LEU 5240.0094
ALA 5250.0111
THR 5260.0103
LEU 5270.0074
ARG 5280.0092
LYS 5290.0118
GLY 5300.0067
ILE 5310.0064
HISE 5320.0084
TRP 5330.0051
ALA 5340.0048
ARG 5350.0048
ASP 5360.0087
VAL 5370.0080
ALA 5380.0075
ARG 5390.0085
SER 5400.0061
SER 5410.0039
ALA 5420.0035
LEU 5430.0034
SER 5440.0065
GLU 5450.0089
TYR 5460.0029
LEU 5470.0091
ASP 5480.0147
GLY 5490.0135
GLU 5500.0113
LEU 5510.0083
PHE 5520.0054
PRO 5530.0032
GLY 5540.0074
SER 5550.0115
GLY 5560.0077
VAL 5570.0144
VAL 5580.0190
SER 5590.0194
ASP 5600.0229
ASP 5610.0145
GLN 5620.0114
ILE 5630.0135
ASP 5640.0114
GLU 5650.0113
TYR 5660.0097
ILE 5670.0089
ARG 5680.0107
ARG 5690.0108
SER 5700.0086
ILE 5710.0084
HISD 5720.0050
SER 5730.0051
SER 5740.0055
ASN 5750.0057
ALA 5760.0062
ILE 5770.0058
THR 5780.0062
GLY 5790.0050
THR 5800.0065
CYS 5810.0053
LYS 5820.0051
MET 5830.0062
GLY 5840.0120
ASN 5850.0184
ALA 5860.0200
GLY 5870.0260
ASP 5880.0151
SER 5890.0132
SER 5900.0079
SER 5910.0077
VAL 5920.0068
VAL 5930.0046
ASP 5940.0058
ASN 5950.0067
GLN 5960.0040
LEU 5970.0048
ARG 5980.0060
VAL 5990.0068
HISE 6000.0062
GLY 6010.0059
VAL 6020.0102
GLU 6030.0104
GLY 6040.0084
LEU 6050.0025
ARG 6060.0028
VAL 6070.0032
VAL 6080.0024
ASP 6090.0035
ALA 6100.0043
SER 6110.0066
VAL 6120.0055
VAL 6130.0053
PRO 6140.0099
LYS 6150.0094
ILE 6160.0072
PRO 6170.0094
GLY 6180.0064
GLY 6190.0053
GLN 6200.0044
THR 6210.0060
GLY 6220.0065
ALA 6230.0086
PRO 6240.0079
VAL 6250.0075
VAL 6260.0065
MET 6270.0063
ILE 6280.0072
ALA 6290.0049
GLU 6300.0037
ARG 6310.0039
ALA 6320.0021
ALA 6330.0036
ALA 6340.0029
LEU 6350.0050
LEU 6360.0059
THR 6370.0066
GLY 6380.0110
LYS 6390.0084
ALA 6400.0080
THR 6410.0100
ILE 6420.0076
GLY 6430.0118
ALA 6440.0209
SER 6450.0053
ALA 6460.0086
ALA 6470.0052
ALA 6480.0049
PRO 6490.0052

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.