CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MD snap  ***

<R2> analysis for 2607022151012161870

---  normal mode 85  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0845
SER 770.0617
PRO 780.0387
VAL 790.0110
ALA 800.0245
GLY 810.0355
GLN 820.0309
LYS 830.0188
TYR 840.0058
ASP 850.0031
TYR 860.0036
ILE 870.0015
LEU 880.0015
VAL 890.0026
GLY 900.0029
GLY 910.0047
GLY 920.0042
THR 930.0048
ALA 940.0043
ALA 950.0038
CYS 960.0037
VAL 970.0042
LEU 980.0056
ALA 990.0055
ASN 1000.0064
ARG 1010.0055
LEU 1020.0063
SER 1030.0070
ALA 1040.0115
ASP 1050.0135
GLY 1060.0145
SER 1070.0173
LYS 1080.0144
ARG 1090.0122
VAL 1100.0068
LEU 1110.0035
VAL 1120.0031
LEU 1130.0054
GLU 1140.0075
ALA 1150.0100
GLY 1160.0126
PRO 1170.0112
ASP 1180.0103
ASN 1190.0080
THR 1200.0144
SER 1210.0160
ARG 1220.0169
ASP 1230.0158
VAL 1240.0110
LYS 1250.0082
ILE 1260.0092
PRO 1270.0097
ALA 1280.0069
ALA 1290.0078
ILE 1300.0083
THR 1310.0069
ARG 1320.0075
LEU 1330.0094
PHE 1340.0078
ARG 1350.0086
SER 1360.0102
PRO 1370.0120
LEU 1380.0085
ASP 1390.0102
TRP 1400.0097
ASN 1410.0094
LEU 1420.0085
PHE 1430.0132
SER 1440.0127
GLU 1450.0168
LEU 1460.0136
GLN 1470.0067
GLU 1480.0071
GLN 1490.0111
LEU 1500.0113
ALA 1510.0146
GLU 1520.0098
ARG 1530.0118
GLN 1540.0144
ILE 1550.0056
TYR 1560.0055
MET 1570.0050
ALA 1580.0077
ARG 1590.0082
GLY 1600.0095
ARG 1610.0108
LEU 1620.0070
LEU 1630.0056
GLY 1640.0046
GLY 1650.0065
SER 1660.0081
SER 1670.0088
ALA 1680.0074
THR 1690.0082
ASN 1700.0061
ALA 1710.0058
THR 1720.0070
LEU 1730.0025
TYR 1740.0048
HISD 1750.0058
ARG 1760.0102
GLY 1770.0088
ALA 1780.0088
ALA 1790.0131
GLY 1800.0092
ASP 1810.0072
TYR 1820.0080
ASP 1830.0085
ALA 1840.0071
TRP 1850.0036
GLY 1860.0038
VAL 1870.0035
GLU 1880.0034
GLY 1890.0043
TRP 1900.0046
SER 1910.0087
SER 1920.0138
GLU 1930.0146
ASP 1940.0072
VAL 1950.0081
LEU 1960.0113
SER 1970.0077
TRP 1980.0085
PHE 1990.0094
VAL 2000.0097
GLN 2010.0101
ALA 2020.0105
GLU 2030.0119
THR 2040.0115
ASN 2050.0071
ALA 2060.0155
ASP 2070.0129
PHE 2080.0162
GLY 2090.0190
PRO 2100.0152
GLY 2110.0096
ALA 2120.0078
TYR 2130.0110
HISH 2140.0082
GLY 2150.0107
SER 2160.0142
GLY 2170.0157
GLY 2180.0082
PRO 2190.0085
MET 2200.0083
ARG 2210.0097
VAL 2220.0084
GLU 2230.0084
ASN 2240.0062
PRO 2250.0056
ARG 2260.0066
TYR 2270.0049
THR 2280.0042
ASN 2290.0051
LYS 2300.0054
GLN 2310.0040
LEU 2320.0038
HISE 2330.0014
THR 2340.0034
ALA 2350.0037
PHE 2360.0032
PHE 2370.0055
LYS 2380.0071
ALA 2390.0058
ALA 2400.0059
GLU 2410.0081
GLU 2420.0084
VAL 2430.0072
GLY 2440.0066
LEU 2450.0070
THR 2460.0052
PRO 2470.0033
ASN 2480.0073
SER 2490.0119
ASP 2500.0113
PHE 2510.0082
ASN 2520.0128
ASP 2530.0162
TRP 2540.0202
SER 2550.0286
HISE 2560.0271
ASP 2570.0152
HISE 2580.0077
ALA 2590.0087
GLY 2600.0042
TYR 2610.0040
GLY 2620.0032
THR 2630.0041
PHE 2640.0030
GLN 2650.0040
VAL 2660.0063
MET 2670.0068
GLN 2680.0076
ASP 2690.0120
LYS 2700.0147
GLY 2710.0102
THR 2720.0089
ARG 2730.0083
ALA 2740.0093
ASP 2750.0074
MET 2760.0062
TYR 2770.0052
ARG 2780.0086
GLN 2790.0079
TYR 2800.0080
LEU 2810.0092
LYS 2820.0097
PRO 2830.0129
VAL 2840.0109
LEU 2850.0097
GLY 2860.0099
ARG 2870.0156
ARG 2880.0188
ASN 2890.0170
LEU 2900.0080
GLN 2910.0055
VAL 2920.0047
LEU 2930.0072
THR 2940.0091
GLY 2950.0113
ALA 2960.0056
ALA 2970.0066
VAL 2980.0073
THR 2990.0089
LYS 3000.0076
VAL 3010.0059
ASN 3020.0080
ILE 3030.0067
ASP 3040.0069
GLN 3050.0101
ALA 3060.0104
ALA 3070.0117
GLY 3080.0087
LYS 3090.0074
ALA 3100.0078
GLN 3110.0068
ALA 3120.0070
LEU 3130.0074
GLY 3140.0052
VAL 3150.0061
GLU 3160.0076
PHE 3170.0070
SER 3180.0050
THR 3190.0028
ASP 3200.0068
GLY 3210.0079
PRO 3220.0066
THR 3230.0062
GLY 3240.0031
GLU 3250.0087
ARG 3260.0072
LEU 3270.0071
SER 3280.0095
ALA 3290.0047
GLU 3300.0081
LEU 3310.0074
ALA 3320.0159
PRO 3330.0297
GLY 3340.0374
GLY 3350.0036
GLU 3360.0035
VAL 3370.0039
ILE 3380.0025
MET 3390.0019
CYS 3400.0014
ALA 3410.0014
GLY 3420.0015
ALA 3430.0021
VAL 3440.0034
HISD 3450.0037
THR 3460.0028
PRO 3470.0039
PHE 3480.0036
LEU 3490.0034
LEU 3500.0028
LYS 3510.0026
HISE 3520.0031
SER 3530.0021
GLY 3540.0015
VAL 3550.0015
GLY 3560.0031
PRO 3570.0070
SER 3580.0087
ALA 3590.0127
GLU 3600.0092
LEU 3610.0037
LYS 3620.0063
GLU 3630.0057
PHE 3640.0041
GLY 3650.0028
ILE 3660.0044
PRO 3670.0083
VAL 3680.0041
VAL 3690.0039
SER 3700.0031
ASN 3710.0060
LEU 3720.0049
ALA 3730.0062
GLY 3740.0029
VAL 3750.0017
GLY 3760.0026
GLN 3770.0019
ASN 3780.0020
LEU 3790.0031
GLN 3800.0020
ASP 3810.0022
GLN 3820.0019
PRO 3830.0027
ALA 3840.0039
CYS 3850.0044
LEU 3860.0058
THR 3870.0054
ALA 3880.0062
ALA 3890.0049
PRO 3900.0052
VAL 3910.0064
LYS 3920.0084
GLU 3930.0121
LYS 3940.0194
TYR 3950.0104
ASP 3960.0141
GLY 3970.0161
ILE 3980.0075
ALA 3990.0068
ILE 4000.0070
SER 4010.0080
ASP 4020.0080
HISE 4030.0082
ILE 4040.0092
TYR 4050.0076
ASN 4060.0068
GLU 4070.0041
LYS 4080.0075
GLY 4090.0087
GLN 4100.0096
ILE 4110.0106
ARG 4120.0106
LYS 4130.0103
ARG 4140.0088
ALA 4150.0133
ILE 4160.0103
ALA 4170.0082
SER 4180.0091
TYR 4190.0057
LEU 4200.0143
LEU 4210.0230
GLY 4220.0035
GLY 4230.0077
ARG 4240.0091
GLY 4250.0070
GLY 4260.0062
LEU 4270.0060
THR 4280.0047
SER 4290.0041
THR 4300.0047
GLY 4310.0050
CYS 4320.0043
ASP 4330.0044
ARG 4340.0043
GLY 4350.0036
ALA 4360.0032
PHE 4370.0039
VAL 4380.0044
ARG 4390.0056
THR 4400.0076
ALA 4410.0094
GLY 4420.0106
GLN 4430.0168
ALA 4440.0115
LEU 4450.0061
PRO 4460.0053
ASP 4470.0057
LEU 4480.0052
GLN 4490.0043
VAL 4500.0047
ARG 4510.0053
PHE 4520.0038
VAL 4530.0047
PRO 4540.0053
GLY 4550.0071
MET 4560.0069
ALA 4570.0070
LEU 4580.0078
ASP 4590.0070
PRO 4600.0071
ASP 4610.0039
GLY 4620.0030
VAL 4630.0016
SER 4640.0028
THR 4650.0023
TYR 4660.0029
VAL 4670.0028
ARG 4680.0025
PHE 4690.0025
ALA 4700.0024
LYS 4710.0008
PHE 4720.0037
GLN 4730.0049
SER 4740.0049
GLN 4750.0063
GLY 4760.0050
LEU 4770.0041
LYS 4780.0031
TRP 4790.0060
PRO 4800.0057
SER 4810.0055
GLY 4820.0067
ILE 4830.0051
THR 4840.0049
MET 4850.0053
GLN 4860.0054
LEU 4870.0053
ILE 4880.0029
ALA 4890.0028
CYS 4900.0035
ARG 4910.0031
PRO 4920.0043
GLN 4930.0074
SER 4940.0051
THR 4950.0022
GLY 4960.0043
SER 4970.0068
VAL 4980.0068
GLY 4990.0080
LEU 5000.0083
LYS 5010.0115
SER 5020.0074
ALA 5030.0063
ASP 5040.0028
PRO 5050.0072
PHE 5060.0058
ALA 5070.0064
PRO 5080.0102
PRO 5090.0087
LYS 5100.0133
LEU 5110.0111
SER 5120.0091
PRO 5130.0062
GLY 5140.0062
TYR 5150.0064
LEU 5160.0066
THR 5170.0098
ASP 5180.0153
LYS 5190.0047
ASP 5200.0216
GLY 5210.0120
ALA 5220.0087
ASP 5230.0048
LEU 5240.0024
ALA 5250.0056
THR 5260.0039
LEU 5270.0043
ARG 5280.0062
LYS 5290.0093
GLY 5300.0073
ILE 5310.0077
HISE 5320.0091
TRP 5330.0073
ALA 5340.0069
ARG 5350.0065
ASP 5360.0052
VAL 5370.0045
ALA 5380.0029
ARG 5390.0041
SER 5400.0043
SER 5410.0055
ALA 5420.0049
LEU 5430.0041
SER 5440.0065
GLU 5450.0071
TYR 5460.0070
LEU 5470.0066
ASP 5480.0086
GLY 5490.0054
GLU 5500.0019
LEU 5510.0055
PHE 5520.0062
PRO 5530.0051
GLY 5540.0036
SER 5550.0011
GLY 5560.0026
VAL 5570.0068
VAL 5580.0104
SER 5590.0087
ASP 5600.0099
ASP 5610.0096
GLN 5620.0077
ILE 5630.0058
ASP 5640.0037
GLU 5650.0052
TYR 5660.0051
ILE 5670.0036
ARG 5680.0051
ARG 5690.0060
SER 5700.0056
ILE 5710.0049
HISD 5720.0031
SER 5730.0028
SER 5740.0022
ASN 5750.0024
ALA 5760.0023
ILE 5770.0030
THR 5780.0018
GLY 5790.0012
THR 5800.0026
CYS 5810.0033
LYS 5820.0038
MET 5830.0034
GLY 5840.0046
ASN 5850.0109
ALA 5860.0188
GLY 5870.0312
ASP 5880.0219
SER 5890.0185
SER 5900.0071
SER 5910.0064
VAL 5920.0039
VAL 5930.0041
ASP 5940.0038
ASN 5950.0033
GLN 5960.0078
LEU 5970.0043
ARG 5980.0068
VAL 5990.0033
HISE 6000.0013
GLY 6010.0009
VAL 6020.0042
GLU 6030.0039
GLY 6040.0041
LEU 6050.0038
ARG 6060.0035
VAL 6070.0034
VAL 6080.0024
ASP 6090.0025
ALA 6100.0025
SER 6110.0027
VAL 6120.0026
VAL 6130.0026
PRO 6140.0038
LYS 6150.0035
ILE 6160.0028
PRO 6170.0045
GLY 6180.0031
GLY 6190.0032
GLN 6200.0023
THR 6210.0037
GLY 6220.0046
ALA 6230.0063
PRO 6240.0051
VAL 6250.0054
VAL 6260.0031
MET 6270.0026
ILE 6280.0017
ALA 6290.0009
GLU 6300.0018
ARG 6310.0033
ALA 6320.0056
ALA 6330.0020
ALA 6340.0054
LEU 6350.0067
LEU 6360.0048
THR 6370.0035
GLY 6380.0046
LYS 6390.0148
ALA 6400.0233
THR 6410.0352
ILE 6420.0217
GLY 6430.0202
ALA 6440.0845
SER 6450.0263
ALA 6460.0290
ALA 6470.0207
ALA 6480.0297
PRO 6490.0160

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.